Restriction Fragments for NUP85/YJR042W



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The currently selected gene/sequence is :

NUP85/YJR042W on chromosome X from coordinates 514055 to 516289.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.4774.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 7 12 + ClaI ATCGAT 8 10 . . 8 11 + TaqI TCGA 8 10 . . 13 17 + TfiI GAWTC 13 16 . . 13 17 + HinfI GANTC 13 16 . . 13 22 + BsaBI GATNNNNATC 17 17 . . 20 25 + ClaI ATCGAT 21 23 . . 21 24 + TaqI TCGA 21 23 . . 34 39 + ZraI GACGTC 36 36 . . 34 39 + AcyI GRCGYC 35 37 . . 34 39 + AatII GACGTC 38 34 . . 35 38 + TaiI ACGT 38 34 . . 35 38 + SetI ASST 38 34 . . 35 38 + MaeII ACGT 35 37 . . 36 40 + Hpy99I CGWCG 40 35 . . 38 41 + TaqI TCGA 38 40 . . 40 43 + DpnI GATC 41 41 . . 40 43 + BstKTI GATC 42 40 . . 40 43 + MboI GATC 39 43 . . 44 47 + TspEI AATT 43 47 . . 60 64 + Hpy99I CGWCG 64 59 . . 62 66 + TspGWI ACGGA 77 75 . . 67 71 + BceAI ACGGC 83 85 . . 70 73 + Hin6I GCGC 70 72 . . 70 73 + GlaI GCGC 71 71 . . 70 73 + HhaI GCGC 72 70 . . 76 80 + DdeI CTNAG 76 79 . . 90 95 + TaqII GACCGA 106 104 . . 95 99 + TspDTI ATGAA 110 108 . . 97 101 + MboII GAAGA 109 108 . . 100 104 + MboII GAAGA 112 111 . . 119 125 + SanDI GGGWCCC 120 123 . . 119 125 + PpuMI RGGWCCY 120 123 . . 119 125 + DraII RGGNCCY 120 123 . . 119 123 + BslFI GGGAC 133 137 . . 119 124 + NlaIV GGNNCC 121 121 . . 120 125 + NlaIV GGNNCC 122 122 . . 120 124 + BmgT120I GGNCC 121 122 . . 120 124 + AvaII GGWCC 120 123 . . 120 124 + AsuI* GGNCC 120 123 . . 121 129 + Tth111I GACNNNGTC 124 125 . . 124 134 + BsiYI* CCNNNNNNNGG 130 127 . . 124 128 - BsrI ACTGG 124 122 . . 123 128 - BfiI ACTGGG 118 117 . . 129 134 + NspBII* CMGCKG 131 131 . . 131 134 - AciI CCGC 131 133 . . 131 135 - FauI CCCGC 124 126 . . 135 138 + CviJI RGCY 136 136 . . 141 145 + BssKI CCNGG 140 145 . . 141 145 + BseBI CCWGG 142 143 . . 141 145 + ScrFI CCNGG 142 143 . . 141 145 + EcoRII CCWGG 140 145 . . 144 149 + NlaIV GGNNCC 146 146 . . 144 148 + BmgT120I GGNCC 145 146 . . 144 148 + AvaII GGWCC 144 147 . . 144 148 + AsuI* GGNCC 144 147 . . 145 149 - BslFI GGGAC 130 134 . . 154 158 + Tsp4CI* ACNGT 156 155 . . 162 167 + BclI TGATCA 162 166 . . 163 166 + DpnI GATC 164 164 . . 163 166 + BstKTI GATC 165 163 . . 163 166 + MboI GATC 162 166 . . 192 196 - SfaNI GCATC 182 186 . . 198 203 + AhaIII* TTTAAA 200 200 . . 199 202 + MseI TTAA 199 201 . . 209 212 + SetI ASST 212 208 . . 209 212 + CviJI RGCY 210 210 . . 209 212 + AluI AGCT 210 210 . . 213 218 + NlaIV GGNNCC 215 215 . . 214 218 + BmgT120I GGNCC 215 216 . . 214 218 + AsuI* GGNCC 214 217 . . 210 215 - GsaI CCCAGC 214 210 . . 215 218 + CviJI RGCY 216 216 . . 215 218 + HaeIII GGCC 216 216 . . 210 215 - BseYI CCCAGC 210 214 . . 228 238 + BsiYI* CCNNNNNNNGG 234 231 . . 228 238 + PflMI CCANNNNNTGG 234 231 . . 238 243 - BsmI GAATGC 238 236 . . 241 245 - TspDTI ATGAA 231 229 . . 249 252 + CviRI* TGCA 250 250 . . 265 270 + HindIII AAGCTT 265 269 . . 266 269 + SetI ASST 269 265 . . 266 269 + CviJI RGCY 267 267 . . 266 269 + AluI AGCT 267 267 . . 281 286 + EcoRI GAATTC 281 285 . . 281 286 + ApoI RAATTY 281 285 . . 282 285 + TspEI AATT 281 285 . . 287 290 + MaeI CTAG 287 289 . . 315 318 + CviRI* TGCA 316 316 . . 319 324 + SnaBI TACGTA 321 321 . . 319 324 + BsaAI YACGTR 321 321 . . 320 323 + TaiI ACGT 323 319 . . 320 323 + SetI ASST 323 319 . . 320 323 + MaeII ACGT 320 322 . . 327 330 + SetI ASST 330 326 . . 338 343 + ApoI RAATTY 338 342 . . 339 342 + TspEI AATT 338 342 . . 344 348 + Tsp4CI* ACNGT 346 345 . . 354 357 + SetI ASST 357 353 . . 355 359 + HphI GGTGA 367 366 . . 371 374 + MseI TTAA 371 373 . . 376 379 + Csp6I GTAC 376 378 . . 376 379 + RsaI GTAC 377 377 . . 379 389 + BsiYI* CCNNNNNNNGG 385 382 . . 379 389 + PflMI CCANNNNNTGG 385 382 . . 395 398 + MseI TTAA 395 397 . . 397 400 + TspEI AATT 396 400 . . 403 406 + TspEI AATT 402 406 . . 407 412 + Hpy178III* TCNNGA 408 410 . . 407 412 + NruI TCGCGA 409 409 . . 408 411 + FnuDII* CGCG 409 409 . . 411 415 - Hin4II* CCTTC 405 404 . . 423 426 + CviRI* TGCA 424 424 . . 427 431 + Tsp4CI* ACNGT 429 428 . . 437 442 + BalI TGGCCA 439 439 . . 437 442 + CfrI YGGCCR 437 441 . . 438 441 + CviJI RGCY 439 439 . . 438 441 + HaeIII GGCC 439 439 . . 439 449 + MwoI GCNNNNNNNGC 445 442 . . 439 449 + BglI GCCNNNNNGGC 445 442 . . 440 445 + DsaI* CCRYGG 440 444 . . 440 445 + StyI CCWWGG 440 444 . . 440 445 + NcoI CCATGG 440 444 . . 440 445 + SecI* CCNNGG 440 444 . . 441 444 + FatI CATG 440 444 . . 441 444 + NlaIII CATG 444 440 . . 441 444 + CviAII CATG 441 443 . . 445 448 - MnlI CCTC 438 437 . . 450 454 + TfiI GAWTC 450 453 . . 450 454 + HinfI GANTC 450 453 . . 453 457 + Hpy188I TCNGA 455 454 . . 458 462 + TspDTI ATGAA 473 471 . . 461 464 + TspEI AATT 460 464 . . 466 479 + AjuI GAANNNNNNNTTGG 458 453 490 485 482 486 + PleI GAGTC 490 491 . . 482 486 + MlyI GAGTC 491 491 . . 482 486 + HinfI GANTC 482 485 . . 489 493 + BinI* GGATC 497 498 . . 490 493 + DpnI GATC 491 491 . . 490 493 + BstKTI GATC 492 490 . . 490 493 + MboI GATC 489 493 . . 492 497 + Hpy178III* TCNNGA 493 495 . . 495 499 + FokI GGATG 508 512 . . 495 499 + BseGI GGATG 501 499 . . 500 504 + MboII GAAGA 512 511 . . 496 500 - BccI CCATC 490 491 . . 505 510 + Hpy166II GTNNAC 507 507 . . 500 505 - Ksp632I* CTCTTC 495 498 . . 526 530 + MboII GAAGA 538 537 . . 522 527 - MmeI TCCRAC 503 501 . . 529 533 + TfiI GAWTC 529 532 . . 529 533 + HinfI GANTC 529 532 . . 535 538 + MseI TTAA 535 537 . . 538 542 + Tsp4CI* ACNGT 540 539 . . 543 548 + AhaIII* TTTAAA 545 545 . . 544 547 + MseI TTAA 544 546 . . 548 552 + Tsp4CI* ACNGT 550 549 . . 552 556 + Hpy188I TCNGA 554 553 . . 553 557 + DdeI CTNAG 553 556 . . 553 557 - BspCNI CTCAG 545 543 . . 553 557 - BseMII CTCAG 544 542 . . 555 558 - MnlI CCTC 548 547 . . 563 568 + TatI WGTACW 563 567 . . 564 567 + Csp6I GTAC 564 566 . . 564 567 + RsaI GTAC 565 565 . . 568 572 - TspDTI ATGAA 558 556 . . 577 581 - BccI CCATC 571 572 . . 582 587 + Hpy178III* TCNNGA 583 585 . . 585 589 + FokI GGATG 598 602 . . 585 589 + BseGI GGATG 591 589 . . 592 597 + BseRI GAGGAG 607 605 . . 592 595 - MnlI CCTC 585 584 . . 602 605 + DpnI GATC 603 603 . . 602 605 + BstKTI GATC 604 602 . . 602 605 + MboI GATC 601 605 . . 604 608 + Hpy188I TCNGA 606 605 . . 595 605 - Hin4I GAYNNNNNVTC 618 613 586 581 616 620 + PleI GAGTC 624 625 . . 616 620 + MlyI GAGTC 625 625 . . 616 620 + HinfI GANTC 616 619 . . 620 625 - BsrDI GCAATG 619 617 . . 629 633 + BsrI ACTGG 634 632 . . 634 639 + VspI ATTAAT 635 637 . . 635 638 + MseI TTAA 635 637 . . 641 644 + DpnI GATC 642 642 . . 641 644 + BstKTI GATC 643 641 . . 641 644 + MboI GATC 640 644 . . 643 647 + Hpy188I TCNGA 645 644 . . 647 651 + Tsp4CI* ACNGT 649 648 . . 649 653 + HphI GGTGA 661 660 . . 650 655 + Hpy166II GTNNAC 652 652 . . 659 663 + TspDTI ATGAA 674 672 . . 661 665 + MboII GAAGA 673 672 . . 686 692 + TspRI CASTGNN 692 683 . . 694 698 + TfiI GAWTC 694 697 . . 690 694 - Hin4II* CCTTC 684 683 . . 694 698 + HinfI GANTC 694 697 . . 698 703 + SfeI* CTRYAG 698 702 . . 701 706 + EcoP15I CAGCAG 731 733 . . 705 708 + SetI ASST 708 704 . . 703 708 - BspMI ACCTGC 694 698 . . 718 723 + AsuII TTCGAA 719 721 . . 719 722 + TaqI TCGA 719 721 . . 728 733 + SspI AATATT 730 730 . . 734 739 + Hpy178III* TCNNGA 735 737 . . 739 744 + HindIII AAGCTT 739 743 . . 740 743 + SetI ASST 743 739 . . 740 743 + CviJI RGCY 741 741 . . 740 743 + AluI AGCT 741 741 . . 747 751 + TfiI GAWTC 747 750 . . 747 751 + HinfI GANTC 747 750 . . 752 755 + SetI ASST 755 751 . . 752 755 + CviJI RGCY 753 753 . . 752 755 + AluI AGCT 753 753 . . 760 763 + MseI TTAA 760 762 . . 764 774 + BplI GAGNNNNNCTC 755 750 787 782 765 770 + StuI AGGCCT 767 767 . . 766 769 + CviJI RGCY 767 767 . . 766 769 + HaeIII GGCC 767 767 . . 764 767 - MnlI CCTC 757 756 . . 767 772 + Cac8I GCNNGC 769 769 . . 764 774 - BplI GAGNNNNNCTC 787 782 755 750 780 783 + SetI ASST 783 779 . . 780 783 + CviJI RGCY 781 781 . . 780 783 + AluI AGCT 781 781 . . 782 787 + SfeI* CTRYAG 782 786 . . 786 789 + SetI ASST 789 785 . . 790 793 + CviRI* TGCA 791 791 . . 800 803 + DpnI GATC 801 801 . . 800 803 + BstKTI GATC 802 800 . . 800 803 + MboI GATC 799 803 . . 802 806 + Hpy188I TCNGA 804 803 . . 804 809 + XhoII RGATCY 804 808 . . 804 809 + BglII AGATCT 804 808 . . 805 808 + DpnI GATC 806 806 . . 805 808 + BstKTI GATC 807 805 . . 805 808 + MboI GATC 804 808 . . 829 834 + BspLU11I* ACATGT 829 833 . . 829 834 + NspI RCATGY 833 829 . . 829 834 + AflIII ACRYGT 829 833 . . 830 833 + FatI CATG 829 833 . . 830 833 + NlaIII CATG 833 829 . . 830 833 + CviAII CATG 830 832 . . 835 839 - BceAI ACGGC 820 822 . . 840 844 - TspDTI ATGAA 830 828 . . 849 852 + CviRI* TGCA 850 850 . . 847 851 - SfaNI GCATC 837 841 . . 857 861 + Tsp45I GTSAC 856 861 . . 857 861 + MaeIII GTNAC 856 861 . . 859 863 + HinfI GANTC 859 862 . . 859 863 - PleI GAGTC 853 854 . . 859 863 - MlyI GAGTC 853 853 . . 863 867 + BccI CCATC 871 872 . . 866 869 + TaqI TCGA 866 868 . . 872 877 + Hpy178III* TCNNGA 873 875 . . 892 896 + TfiI GAWTC 892 895 . . 892 896 + HinfI GANTC 892 895 . . 901 906 + TatI WGTACW 901 905 . . 902 905 + Csp6I GTAC 902 904 . . 902 905 + RsaI GTAC 903 903 . . 899 903 - BsrI ACTGG 899 897 . . 921 926 + ApoI RAATTY 921 925 . . 922 925 + TspEI AATT 921 925 . . 935 938 + TspEI AATT 934 938 . . 937 940 + MseI TTAA 937 939 . . 945 948 + CviJI RGCY 946 946 . . 973 978 + BetI* WCCGGW 973 977 . . 974 977 + HpaII CCGG 974 976 . . 976 980 + HphI GGTGA 988 987 . . 980 983 + TspEI AATT 979 983 . . 997 1001 + MboII GAAGA 1009 1008 . . 1014 1017 + TspEI AATT 1013 1017 . . 1034 1039 + ApoI RAATTY 1034 1038 . . 1035 1038 + TspEI AATT 1034 1038 . . 1039 1044 + PstI CTGCAG 1043 1039 . . 1039 1044 + SfeI* CTRYAG 1039 1043 . . 1040 1043 + CviRI* TGCA 1041 1041 . . 1054 1057 + TaiI ACGT 1057 1053 . . 1054 1057 + SetI ASST 1057 1053 . . 1054 1057 + MaeII ACGT 1054 1056 . . 1053 1058 - BtrI CACGTC 1055 1055 . . 1063 1067 + PleI GAGTC 1071 1072 . . 1063 1067 + MlyI GAGTC 1072 1072 . . 1063 1067 + HinfI GANTC 1063 1066 . . 1067 1077 + BsiYI* CCNNNNNNNGG 1073 1070 . . 1097 1100 + MnlI CCTC 1107 1106 . . 1112 1117 + EcoP15I CAGCAG 1142 1144 . . 1118 1123 + SspI AATATT 1120 1120 . . 1131 1135 + Tsp45I GTSAC 1130 1135 . . 1131 1135 + MaeIII GTNAC 1130 1135 . . 1133 1139 + TspRI CASTGNN 1139 1130 . . 1134 1138 + BsrI ACTGG 1139 1137 . . 1140 1143 + SetI ASST 1143 1139 . . 1140 1143 + CviJI RGCY 1141 1141 . . 1140 1143 + AluI AGCT 1141 1141 . . 1145 1148 + TaiI ACGT 1148 1144 . . 1145 1148 + SetI ASST 1148 1144 . . 1145 1148 + MaeII ACGT 1145 1147 . . 1146 1150 + Hpy99I CGWCG 1150 1145 . . 1150 1155 + Hpy166II GTNNAC 1152 1152 . . 1150 1155 + AccI GTMKAC 1151 1153 . . 1178 1181 + FatI CATG 1177 1181 . . 1178 1181 + NlaIII CATG 1181 1177 . . 1178 1181 + CviAII CATG 1178 1180 . . 1182 1186 + Hpy99I CGWCG 1186 1181 . . 1183 1188 + SalI GTCGAC 1183 1187 . . 1183 1188 + Hpy166II GTNNAC 1185 1185 . . 1183 1188 + HindII GTYRAC 1185 1185 . . 1183 1188 + AccI GTMKAC 1184 1186 . . 1184 1187 + TaqI TCGA 1184 1186 . . 1181 1185 - HgaI GACGC 1170 1175 . . 1212 1215 + TspEI AATT 1211 1215 . . 1218 1223 + Cfr10I RCCGGY 1218 1222 . . 1218 1223 + BetI* WCCGGW 1218 1222 . . 1218 1223 + AgeI ACCGGT 1218 1222 . . 1219 1222 + HpaII CCGG 1219 1221 . . 1228 1232 + TfiI GAWTC 1228 1231 . . 1228 1232 + HinfI GANTC 1228 1231 . . 1243 1246 + CviRI* TGCA 1244 1244 . . 1247 1252 + EcoP15I CAGCAG 1277 1279 . . 1249 1253 + BlsI GCNGC 1251 1250 . . 1249 1253 + BisI GCNGC 1250 1251 . . 1249 1253 + BbvI GCAGC 1261 1265 . . 1249 1253 + TseI GCWGC 1249 1252 . . 1252 1262 + MwoI GCNNNNNNNGC 1258 1255 . . 1259 1262 + AciI CCGC 1259 1261 . . 1281 1284 + SetI ASST 1284 1280 . . 1294 1299 + SspI AATATT 1296 1296 . . 1303 1306 - MnlI CCTC 1296 1295 . . 1306 1310 + HphI GGTGA 1318 1317 . . 1319 1324 + BtgZI GCGATG 1334 1338 . . 1334 1338 + TspDTI ATGAA 1349 1347 . . 1336 1340 + MboII GAAGA 1348 1347 . . 1336 1341 + BbvII* GAAGAC 1343 1347 . . 1354 1358 + MboII GAAGA 1366 1365 . . 1356 1361 + XhoII RGATCY 1356 1360 . . 1356 1361 + BglII AGATCT 1356 1360 . . 1357 1367 + Hin4I GAYNNNNNVTC 1348 1343 1380 1375 1357 1360 + DpnI GATC 1358 1358 . . 1357 1360 + BstKTI GATC 1359 1357 . . 1357 1360 + MboI GATC 1356 1360 . . 1384 1388 + SfaNI GCATC 1393 1397 . . 1402 1405 + SetI ASST 1405 1401 . . 1402 1405 + CviJI RGCY 1403 1403 . . 1402 1405 + AluI AGCT 1403 1403 . . 1421 1426 + Hpy166II GTNNAC 1423 1423 . . 1424 1430 + TspRI CASTGNN 1430 1421 . . 1424 1432 + DraIII CACNNNGTG 1429 1426 . . 1425 1429 + BsrI ACTGG 1430 1428 . . 1425 1430 + BfiI ACTGGG 1435 1434 . . 1429 1433 + HphI GGTGA 1441 1440 . . 1427 1432 - TaqII CACCCA 1417 1415 . . 1445 1448 + CviJI RGCY 1446 1446 . . 1445 1448 + HaeIII GGCC 1446 1446 . . 1445 1449 + BmgT120I GGNCC 1446 1447 . . 1445 1449 + AsuI* GGNCC 1445 1448 . . 1467 1470 + CviJI RGCY 1468 1468 . . 1468 1478 + MwoI GCNNNNNNNGC 1474 1471 . . 1476 1479 + CviRI* TGCA 1477 1477 . . 1483 1487 + BslFI GGGAC 1497 1501 . . 1494 1497 + CviRI* TGCA 1495 1495 . . 1484 1495 - TstI CACNNNNNNTCC 1508 1503 1476 1471 1506 1510 + HphI GGTGA 1518 1517 . . 1512 1515 + CviRI* TGCA 1513 1513 . . 1516 1525 + XmnI GAANNNNTTC 1520 1520 . . 1517 1520 + TspEI AATT 1516 1520 . . 1540 1544 + MaeIII GTNAC 1539 1544 . . 1562 1566 + FokI GGATG 1575 1579 . . 1562 1566 + BseGI GGATG 1568 1566 . . 1563 1567 - SfaNI GCATC 1553 1557 . . 1567 1571 + DdeI CTNAG 1567 1570 . . 1587 1591 - BsmAI GTCTC 1581 1585 . . 1605 1617 + BarI GAAGNNNNNNTAC 1597 1592 1629 1624 1605 1609 - Hin4II* CCTTC 1599 1598 . . 1621 1624 + TaiI ACGT 1624 1620 . . 1621 1624 + SetI ASST 1624 1620 . . 1621 1624 + MaeII ACGT 1621 1623 . . 1656 1659 + TspEI AATT 1655 1659 . . 1671 1676 + ApoI RAATTY 1671 1675 . . 1672 1675 + TspEI AATT 1671 1675 . . 1684 1689 + Cac8I GCNNGC 1686 1686 . . 1684 1687 - AciI CCGC 1684 1686 . . 1684 1688 - FauI CCCGC 1677 1679 . . 1694 1698 + TspDTI ATGAA 1709 1707 . . 1698 1702 + BsrI ACTGG 1703 1701 . . 1709 1718 + MslI CAYNNNNRTG 1713 1713 . . 1718 1721 + CviJI RGCY 1719 1719 . . 1717 1722 - TsoI TARCCA 1707 1705 . . 1730 1735 + HindIII AAGCTT 1730 1734 . . 1731 1734 + SetI ASST 1734 1730 . . 1731 1734 + CviJI RGCY 1732 1732 . . 1731 1734 + AluI AGCT 1732 1732 . . 1738 1741 + CviRI* TGCA 1739 1739 . . 1739 1749 + MwoI GCNNNNNNNGC 1745 1742 . . 1740 1743 + FatI CATG 1739 1743 . . 1740 1743 + NlaIII CATG 1743 1739 . . 1740 1743 + CviAII CATG 1740 1742 . . 1746 1750 + BmgT120I GGNCC 1747 1748 . . 1746 1750 + AsuI* GGNCC 1746 1749 . . 1744 1747 - MnlI CCTC 1737 1736 . . 1747 1750 + CviJI RGCY 1748 1748 . . 1747 1750 + HaeIII GGCC 1748 1748 . . 1749 1759 + BsiYI* CCNNNNNNNGG 1755 1752 . . 1749 1759 + PflMI CCANNNNNTGG 1755 1752 . . 1755 1760 - MmeI TCCRAC 1736 1734 . . 1773 1778 + BsmI GAATGC 1779 1777 . . 1799 1804 + PstI CTGCAG 1803 1799 . . 1799 1804 + SfeI* CTRYAG 1799 1803 . . 1800 1803 + CviRI* TGCA 1801 1801 . . 1806 1810 + FokI GGATG 1819 1823 . . 1806 1810 + BseGI GGATG 1812 1810 . . 1804 1807 - MnlI CCTC 1797 1796 . . 1811 1814 + TaiI ACGT 1814 1810 . . 1811 1814 + SetI ASST 1814 1810 . . 1811 1814 + MaeII ACGT 1811 1813 . . 1814 1819 + PsiI TTATAA 1816 1816 . . 1846 1850 + Tsp45I GTSAC 1845 1850 . . 1846 1850 + MaeIII GTNAC 1845 1850 . . 1850 1861 + BcgI CGANNNNNNTGC 1839 1837 1873 1871 1851 1856 + EcoRI GAATTC 1851 1855 . . 1851 1856 + ApoI RAATTY 1851 1855 . . 1852 1855 + TspEI AATT 1851 1855 . . 1860 1864 - HgaI GACGC 1849 1854 . . 1872 1877 + HaeII RGCGCY 1876 1872 . . 1873 1876 + Hin6I GCGC 1873 1875 . . 1873 1876 + GlaI GCGC 1874 1874 . . 1873 1883 + MwoI GCNNNNNNNGC 1879 1876 . . 1873 1876 + HhaI GCGC 1875 1873 . . 1877 1882 + NdeI CATATG 1878 1880 . . 1890 1894 + Tsp45I GTSAC 1889 1894 . . 1890 1894 + MaeIII GTNAC 1889 1894 . . 1895 1898 + TspEI AATT 1894 1898 . . 1904 1907 + SetI ASST 1907 1903 . . 1904 1907 + CviJI RGCY 1905 1905 . . 1904 1907 + AluI AGCT 1905 1905 . . 1906 1910 + DdeI CTNAG 1906 1909 . . 1906 1910 - BspCNI CTCAG 1898 1896 . . 1910 1914 + BslFI GGGAC 1924 1928 . . 1906 1910 - BseMII CTCAG 1897 1895 . . 1908 1911 - MnlI CCTC 1901 1900 . . 1905 1911 - Bpu10I CCTNAGC 1906 1909 . . 1905 1911 - BbvCI CCTCAGC 1906 1909 . . 1918 1922 + MboII GAAGA 1930 1929 . . 1925 1930 + NlaIV GGNNCC 1927 1927 . . 1926 1930 + BmgT120I GGNCC 1927 1928 . . 1926 1930 + AsuI* GGNCC 1926 1929 . . 1927 1930 + CviJI RGCY 1928 1928 . . 1927 1930 + HaeIII GGCC 1928 1928 . . 1932 1937 + HaeII RGCGCY 1936 1932 . . 1932 1937 + Eco47III AGCGCT 1934 1934 . . 1933 1936 + Hin6I GCGC 1933 1935 . . 1933 1936 + GlaI GCGC 1934 1934 . . 1933 1936 + HhaI GCGC 1935 1933 . . 1935 1939 + BlsI GCNGC 1937 1936 . . 1935 1939 + BisI GCNGC 1936 1937 . . 1935 1939 + TseI GCWGC 1935 1938 . . 1938 1941 + Hin6I GCGC 1938 1940 . . 1938 1941 + GlaI GCGC 1939 1939 . . 1938 1948 + MwoI GCNNNNNNNGC 1944 1941 . . 1938 1941 + HhaI GCGC 1940 1938 . . 1935 1939 - BbvI GCAGC 1922 1926 . . 1960 1965 + EcoRI GAATTC 1960 1964 . . 1960 1965 + ApoI RAATTY 1960 1964 . . 1961 1964 + TspEI AATT 1960 1964 . . 2005 2010 + ApoI RAATTY 2005 2009 . . 2006 2009 + TspEI AATT 2005 2009 . . 2013 2016 + Csp6I GTAC 2013 2015 . . 2013 2016 + RsaI GTAC 2014 2014 . . 2019 2022 + TspEI AATT 2018 2022 . . 2042 2045 + SetI ASST 2045 2041 . . 2042 2045 + CviJI RGCY 2043 2043 . . 2042 2045 + AluI AGCT 2043 2043 . . 2049 2053 + FokI GGATG 2062 2066 . . 2049 2053 + BseGI GGATG 2055 2053 . . 2051 2055 + TspDTI ATGAA 2066 2064 . . 2053 2057 + MboII GAAGA 2065 2064 . . 2056 2060 + TfiI GAWTC 2056 2059 . . 2056 2060 + HinfI GANTC 2056 2059 . . 2060 2066 + TspRI CASTGNN 2066 2057 . . 2068 2072 + Tsp4CI* ACNGT 2070 2069 . . 2097 2101 + FokI GGATG 2110 2114 . . 2097 2101 + BseGI GGATG 2103 2101 . . 2101 2105 + HgaI GACGC 2110 2115 . . 2108 2112 + TspDTI ATGAA 2123 2121 . . 2129 2133 + TspDTI ATGAA 2144 2142 . . 2154 2159 + HindIII AAGCTT 2154 2158 . . 2155 2158 + SetI ASST 2158 2154 . . 2155 2158 + CviJI RGCY 2156 2156 . . 2155 2158 + AluI AGCT 2156 2156 . . 2160 2163 + SetI ASST 2163 2159 . . 2162 2165 + MaeI CTAG 2162 2164 . . 2169 2172 + FatI CATG 2168 2172 . . 2169 2172 + NlaIII CATG 2172 2168 . . 2169 2172 + CviAII CATG 2169 2171 . . 2187 2192 + ApoI RAATTY 2187 2191 . . 2188 2191 + TspEI AATT 2187 2191 . . 2191 2194 + MseI TTAA 2191 2193 . . 2205 2210 + ApoI RAATTY 2205 2209 . . 2206 2209 + TspEI AATT 2205 2209 . . 2213 2216 + TspEI AATT 2212 2216 . . 2229 2232 + FatI CATG 2228 2232 . . 2229 2232 + NlaIII CATG 2232 2228 . . 2229 2232 + CviAII CATG 2229 2231 . . 2227 2231 - TspDTI ATGAA 2217 2215 . . #--------------------------------------- # # # AatII: # [GACGTC] # 38 2197 # # AccI: # [GTMKAC] # 33 1051 1151 # # AciI: # [CCGC] # 131 425 551 1128 # # AcyI: # [GRCGYC] # 35 2200 # # AflIII: # [ACRYGT] # 829 1406 # # AgeI: # [ACCGGT] # 1017 1218 # # AhaIII*: # [TTTAAA] # 200 345 1690 # # AjuI: # [GAANNNNNNNTTGG] # 32 458 1745 # # AluI: # [AGCT] # 12 28 57 79 113 138 # 173 210 262 329 360 474 # # ApoI: # [RAATTY] # 18 30 45 57 109 113 # 180 182 281 583 637 # # AsuI*: # [GGNCC] # 24 70 120 180 301 309 # 1231 # # AsuII: # [TTCGAA] # 719 1516 # # AvaII: # [GGWCC] # 24 120 2091 # # BalI: # [TGGCCA] # 439 1796 # # BarI: # [GAAGNNNNNNTAC] # 32 606 1597 # # BbvCI: # [CCTCAGC] # 329 1906 # # BbvI: # [GCAGC] # 313 661 1261 # # BbvII*: # [GAAGAC] # 892 1343 # # BccI: # [CCATC] # 81 300 490 1364 # # BceAI: # [ACGGC] # 83 737 1415 # # BcgI: # [CGANNNNNNTGC] # 34 362 1839 # # BclI: # [TGATCA] # 162 2073 # # BetI*: # [WCCGGW] # 245 973 1017 # # BfiI: # [ACTGGG] # 118 800 1317 # # BglI: # [GCCNNNNNGGC] # 445 1790 # # BglII: # [AGATCT] # 552 804 879 # # BinI*: # [GGATC] # 497 1738 # # BisI: # [GCNGC] # 299 686 1250 # # BlsI: # [GCNGC] # 298 686 1251 # # BmgT120I: # [GGNCC] # 24 70 121 180 301 308 # 1231 # # BplI: # [GAGNNNNNCTC] # 0 0 32 755 1448 # # Bpu10I: # [CCTNAGC] # 329 1906 # # BsaAI: # [YACGTR] # 321 1914 # # BsaBI: # [GATNNNNATC] # 17 2218 # # BseBI: # [CCWGG] # 142 2093 # # BseGI: # [GGATG] # 48 90 132 243 244 501 # 977 # # BseMII: # [CTCAG] # 338 544 1353 # # BseRI: # [GAGGAG] # 607 1628 # # BseYI: # [CCCAGC] # 210 2025 # # BsiYI*: # [CCNNNNNNNGG] # 104 130 151 480 682 688 # # BslFI: # [GGGAC] # 3 130 311 427 1364 # # BsmAI: # [GTCTC] # 654 1581 # # BsmI: # [GAATGC] # 238 456 1541 # # BspCNI: # [CTCAG] # 337 545 1353 # # BspLU11I*: # [ACATGT] # 829 1406 # # BspMI: # [ACCTGC] # 694 1541 # # BsrDI: # [GCAATG] # 619 1616 # # BsrI: # [ACTGG] # 124 240 265 273 291 510 # 532 # # BssKI: # [CCNGG] # 140 2095 # # BstKTI: # [GATC] # 5 39 42 112 123 159 # 327 552 876 # # BtgZI: # [GCGATG] # 901 1334 # # BtrI: # [CACGTC] # 1055 1180 # # Cac8I: # [GCNNGC] # 549 769 917 # # Cfr10I: # [RCCGGY] # 1017 1218 # # CfrI: # [YGGCCR] # 437 1798 # # ClaI: # [ATCGAT] # 8 13 2214 # # Csp6I: # [GTAC] # 188 222 338 376 1111 # # CviAII: # [CATG] # 6 60 348 389 429 441 # 562 # # CviJI: # [RGCY] # 6 12 13 14 14 16 # 22 23 43 51 74 79 # 113 115 136 157 165 172 # 195 251 262 302 # # CviRI*: # [TGCA] # 18 18 59 62 66 108 # 191 203 226 233 250 367 # 434 # # DdeI: # [CTNAG] # 76 329 339 477 1014 # # DpnI: # [GATC] # 5 39 41 112 123 159 # 327 552 877 # # DraII: # [RGGNCCY] # 120 2115 # # DraIII: # [CACNNNGTG] # 806 1429 # # DsaI*: # [CCRYGG] # 440 1795 # # Eco47III: # [AGCGCT] # 301 1934 # # EcoP15I: # [CAGCAG] # 135 411 731 958 # # EcoRI: # [GAATTC] # 109 275 281 1570 # # EcoRII: # [CCWGG] # 140 2095 # # FatI: # [CATG] # 7 60 348 389 429 440 # 562 # # FauI: # [CCCGC] # 124 558 1553 # # FnuDII*: # [CGCG] # 409 1826 # # FokI: # [GGATG] # 48 90 125 243 244 508 # 977 # # GlaI: # [GCGC] # 5 60 71 296 1803 # # GsaI: # [CCCAGC] # 214 2021 # # HaeII: # [RGCGCY] # 60 299 1876 # # HaeIII: # [GGCC] # 180 216 223 302 307 328 # 679 # # HgaI: # [GACGC] # 125 261 679 1170 # # HhaI: # [GCGC] # 5 60 72 295 1803 # # Hin4I: # [GAYNNNNNVTC] # 32 32 586 730 855 # # Hin4II*: # [CCTTC] # 279 405 636 915 # # Hin6I: # [GCGC] # 5 60 70 297 1803 # # HindII: # [GTYRAC] # 1050 1185 # # HindIII: # [AAGCTT] # 81 265 424 474 991 # # HinfI: # [GANTC] # 13 32 33 47 53 78 # 87 112 165 171 179 437 # 828 # # HpaII: # [CCGG] # 245 974 1016 # # HphI: # [GGTGA] # 77 123 294 327 330 367 # 717 # # Hpy166II: # [GTNNAC] # 33 145 238 500 507 812 # # Hpy178III*: # [TCNNGA] # 85 90 138 152 408 1362 # # Hpy188I: # [TCNGA] # 39 52 99 159 455 1431 # # Hpy99I: # [CGWCG] # 24 36 40 1049 1086 # # Ksp632I*: # [CTCTTC] # 495 1740 # # MaeI: # [CTAG] # 73 287 1875 # # MaeII: # [ACGT] # 35 91 190 285 424 476 # 734 # # MaeIII: # [GTNAC] # 44 274 306 346 409 856 # # MboI: # [GATC] # 5 39 39 112 123 159 # 327 552 879 # # MboII: # [GAAGA] # 3 18 26 109 135 135 # 170 336 339 400 564 # # MlyI: # [GAGTC] # 134 219 228 491 1163 # # MmeI: # [TCCRAC] # 499 503 1233 # # MnlI: # [CCTC] # 37 60 104 110 172 189 # 334 350 438 441 # # MseI: # [TTAA] # 9 24 44 91 125 140 # 172 177 199 1254 # # MslI: # [CAYNNNNRTG] # 522 1713 # # MwoI: # [GCNNNNNNNGC] # 65 134 216 271 291 445 # 813 # # NcoI: # [CCATGG] # 440 1795 # # NdeI: # [CATATG] # 357 1878 # # NlaIII: # [CATG] # 3 60 348 389 429 444 # 562 # # NlaIV: # [GGNNCC] # 1 24 69 121 308 1712 # # NruI: # [TCGCGA] # 409 1826 # # NspBII*: # [CMGCKG] # 131 2104 # # NspI: # [RCATGY] # 833 1402 # # PflMI: # [CCANNNNNTGG] # 151 234 480 1370 # # PleI: # [GAGTC] # 134 218 229 490 1164 # # PpuMI: # [RGGWCCY] # 120 2115 # # PsiI: # [TTATAA] # 419 1816 # # PstI: # [CTGCAG] # 432 760 1043 # # RsaI: # [GTAC] # 188 221 338 377 1111 # # SalI: # [GTCGAC] # 1052 1183 # # SanDI: # [GGGWCCC] # 120 2115 # # ScrFI: # [CCNGG] # 142 2093 # # SecI*: # [CCNNGG] # 440 1795 # # SetI: # [ASST] # 5 5 6 7 12 27 # 28 35 38 54 57 72 # 80 86 93 110 113 121 # 136 138 174 219 268 351 # # SfaNI: # [GCATC] # 160 182 556 655 682 # # SfeI*: # [CTRYAG] # 84 257 436 698 760 # # SnaBI: # [TACGTA] # 321 1914 # # SspI: # [AATATT] # 176 390 730 939 # # StuI: # [AGGCCT] # 767 1468 # # StyI: # [CCWWGG] # 440 1795 # # TaiI: # [ACGT] # 38 91 190 285 421 476 # 734 # # TaqI: # [TCGA] # 8 13 17 147 318 681 # 1051 # # TaqII: # [GACCGA] # 106 818 1311 # # TatI: # [WGTACW] # 338 563 1334 # # TfiI: # [GAWTC] # 13 53 79 145 165 179 # 336 437 828 # # TseI: # [GCWGC] # 300 686 1249 # # TsoI: # [TARCCA] # 528 1707 # # Tsp45I: # [GTSAC] # 44 274 346 715 856 # # Tsp4CI*: # [ACNGT] # 10 83 99 111 156 165 # 190 1421 # # TspDTI: # [ATGAA] # 18 21 57 73 85 110 # 116 121 156 242 357 360 # 519 # # TspEI: # [AATT] # 6 7 13 13 16 18 # 21 23 34 43 43 45 # 45 57 58 58 66 139 # 169 177 180 238 305 461 # # TspGWI: # [ACGGA] # 77 2158 # # TspRI: # [CASTGNN] # 169 291 447 636 692 # # TstI: # [CACNNNNNNTCC] # 32 727 1476 # # Tth111I: # [GACNNNGTC] # 124 2111 # # VspI: # [ATTAAT] # 635 1600 # # XhoII: # [RGATCY] # 552 804 879 # # XmnI: # [GAANNNNTTC] # 715 1520 # # ZraI: # [GACGTC] # 36 2199 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 2235 # Reported_sequences: 1 # Reported_hitcount: 503 #---------------------------------------