Restriction Fragments for YJLWtau3



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

YJLWtau3 on chromosome X from coordinates 416266 to 416441.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.26705.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 2 5 + MseI TTAA 2 4 . . 12 16 + MaeIII GTNAC 11 16 . . 23 26 + TspEI AATT 22 26 . . 25 28 + MseI TTAA 25 27 . . 33 36 + TaiI ACGT 36 32 . . 33 36 + SetI ASST 36 32 . . 33 36 + MaeII ACGT 33 35 . . 72 77 + SfeI* CTRYAG 72 76 . . 84 88 + BsmAI GTCTC 89 93 . . 86 90 + DdeI CTNAG 86 89 . . 86 90 + BspCNI CTCAG 99 97 . . 86 90 + BseMII CTCAG 100 98 . . 106 109 + FatI CATG 105 109 . . 106 109 + NlaIII CATG 109 105 . . 106 109 + CviAII CATG 106 108 . . 127 130 + Hin6I GCGC 127 129 . . 127 130 + GlaI GCGC 128 128 . . 127 130 + HhaI GCGC 129 127 . . 129 134 + NspI RCATGY 133 129 . . 130 133 + FatI CATG 129 133 . . 130 133 + NlaIII CATG 133 129 . . 130 133 + CviAII CATG 130 132 . . 140 143 + SetI ASST 143 139 . . 141 144 + MnlI CCTC 151 150 . . 160 164 + MboII GAAGA 172 171 . . 161 171 + FalI AAGNNNNNCTT 152 147 . . 162 167 + XhoII RGATCY 162 166 . . 162 167 + BglII AGATCT 162 166 . . 163 166 + DpnI GATC 164 164 . . 163 166 + BstKTI GATC 165 163 . . 163 166 + MboI GATC 162 166 . . #--------------------------------------- # # # BglII: # [AGATCT] # 14 162 # # BseMII: # [CTCAG] # 76 100 # # BsmAI: # [GTCTC] # 87 89 # # BspCNI: # [CTCAG] # 77 99 # # BstKTI: # [GATC] # 11 165 # # CviAII: # [CATG] # 24 46 106 # # DdeI: # [CTNAG] # 86 90 # # DpnI: # [GATC] # 12 164 # # FalI: # [AAGNNNNNCTT] # 24 152 # # FatI: # [CATG] # 24 47 105 # # GlaI: # [GCGC] # 48 128 # # HhaI: # [GCGC] # 47 129 # # Hin6I: # [GCGC] # 49 127 # # MaeII: # [ACGT] # 33 143 # # MaeIII: # [GTNAC] # 11 165 # # MboI: # [GATC] # 14 162 # # MboII: # [GAAGA] # 4 172 # # MnlI: # [CCTC] # 25 151 # # MseI: # [TTAA] # 2 23 151 # # NlaIII: # [CATG] # 24 43 109 # # NspI: # [RCATGY] # 43 133 # # SetI: # [ASST] # 33 36 107 # # SfeI*: # [CTRYAG] # 72 104 # # TaiI: # [ACGT] # 36 140 # # TspEI: # [AATT] # 22 154 # # XhoII: # [RGATCY] # 14 162 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 176 # Reported_sequences: 1 # Reported_hitcount: 31 #---------------------------------------