Restriction Fragments for YJL127W-A



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

YJL127W-A on chromosome X from coordinates 180194 to 180310.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.9899.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 3 14 + DrdI GACNNNNNNGTC 9 7 . . 4 7 + TaiI ACGT 7 3 . . 4 7 + SetI ASST 7 3 . . 4 7 + MaeII ACGT 4 6 . . 13 18 + Hpy178III* TCNNGA 14 16 . . 14 19 + Eco57MI CTGRAG 35 33 . . 14 19 + GsuI CTGGAG 35 33 . . 19 23 - Hin4II* CCTTC 13 12 . . 48 51 + TaiI ACGT 51 47 . . 48 51 + SetI ASST 51 47 . . 48 51 + MaeII ACGT 48 50 . . 48 53 + AflIII ACRYGT 48 52 . . 50 55 + Hpy166II GTNNAC 52 52 . . 52 55 + Csp6I GTAC 52 54 . . 52 55 + RsaI GTAC 53 53 . . 64 68 + BlsI GCNGC 66 65 . . 64 68 + BisI GCNGC 65 66 . . 64 68 + BbvI GCAGC 76 80 . . 64 68 + TseI GCWGC 64 67 . . 66 69 + SetI ASST 69 65 . . 66 69 + CviJI RGCY 67 67 . . 66 69 + AluI AGCT 67 67 . . 77 81 - MboII GAAGA 69 68 . . 76 81 - BbvII* GAAGAC 69 73 . . 91 94 + TspEI AATT 90 94 . . 99 103 - MboII GAAGA 91 90 . . 103 106 + HpaII CCGG 103 105 . . 106 111 + Cac8I GCNNGC 108 108 . . 112 115 + SetI ASST 115 111 . . 110 115 - BspMI ACCTGC 101 105 . . #--------------------------------------- # # # AflIII: # [ACRYGT] # 48 69 # # AluI: # [AGCT] # 50 67 # # BbvI: # [GCAGC] # 41 76 # # BbvII*: # [GAAGAC] # 48 69 # # BisI: # [GCNGC] # 52 65 # # BlsI: # [GCNGC] # 51 66 # # BspMI: # [ACCTGC] # 16 101 # # Cac8I: # [GCNNGC] # 9 108 # # Csp6I: # [GTAC] # 52 65 # # CviJI: # [RGCY] # 50 67 # # DrdI: # [GACNNNNNNGTC] # 9 108 # # Eco57MI: # [CTGRAG] # 35 82 # # GsuI: # [CTGGAG] # 35 82 # # Hin4II*: # [CCTTC] # 13 104 # # HpaII: # [CCGG] # 14 103 # # Hpy166II: # [GTNNAC] # 52 65 # # Hpy178III*: # [TCNNGA] # 14 103 # # MaeII: # [ACGT] # 4 44 69 # # MboII: # [GAAGA] # 22 26 69 # # RsaI: # [GTAC] # 53 64 # # SetI: # [ASST] # 2 7 18 44 46 # # TaiI: # [ACGT] # 7 44 66 # # TseI: # [GCWGC] # 53 64 # # TspEI: # [AATT] # 27 90 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 117 # Reported_sequences: 1 # Reported_hitcount: 30 #---------------------------------------