Restriction Fragments for XBP1/YIL101C



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The currently selected gene/sequence is :

XBP1/YIL101C on chromosome IX from coordinates 177250 to 175307.

The sequence you have requested is oriented with respect to the Crick (bottom) strand. Thus, the chromosomal coordinate of the beginning of the gene or sequence is larger than that of the end. The sequence shown here is the 5'-3' direction of the Crick strand and is the reverse complement of the Watson (top) strand.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.2.30642.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 1 5 + TspDTI ATGAA 16 14 . . 10 14 + FauI CCCGC 18 20 . . 11 14 + AciI CCGC 11 13 . . 23 26 + MseI TTAA 23 25 . . 26 30 + Tsp4CI* ACNGT 28 27 . . 27 33 + TspRI CASTGNN 33 24 . . 29 33 + Tsp45I GTSAC 28 33 . . 29 33 + MaeIII GTNAC 28 33 . . 34 38 + Tsp4CI* ACNGT 36 35 . . 37 42 + Hpy166II GTNNAC 39 39 . . 37 40 + Csp6I GTAC 37 39 . . 37 40 + RsaI GTAC 38 38 . . 43 46 + MseI TTAA 43 45 . . 46 50 + TspGWI ACGGA 61 59 . . 56 61 + SecI* CCNNGG 56 60 . . 57 61 + BssKI CCNGG 56 61 . . 57 61 + BseBI CCWGG 58 59 . . 57 61 + ScrFI CCNGG 58 59 . . 57 61 + EcoRII CCWGG 56 61 . . 73 78 + Esp3I CGTCTC 79 83 . . 74 78 + BsmAI GTCTC 79 83 . . 72 76 - HgaI GACGC 61 66 . . 80 83 + SetI ASST 83 79 . . 81 84 + MnlI CCTC 91 90 . . 91 94 + Csp6I GTAC 91 93 . . 91 94 + RsaI GTAC 92 92 . . 93 97 + BsrI ACTGG 98 96 . . 97 107 + Hin4I GAYNNNNNVTC 88 83 120 115 101 105 + BslFI GGGAC 115 119 . . 103 107 + HinfI GANTC 103 106 . . 103 107 - PleI GAGTC 97 98 . . 103 107 - MlyI GAGTC 97 97 . . 108 112 + TauI GCSGC 111 108 . . 108 112 + BlsI GCNGC 110 109 . . 108 112 + BisI GCNGC 109 110 . . 109 112 + AciI CCGC 109 111 . . 111 116 + NaeI GCCGGC 113 113 . . 111 116 + MroNI GCCGGC 111 115 . . 111 116 + Cac8I GCNNGC 113 113 . . 111 116 + Cfr10I RCCGGY 111 115 . . 112 115 + HpaII CCGG 112 114 . . 113 118 + CfrI YGGCCR 113 117 . . 114 117 + CviJI RGCY 115 115 . . 114 117 + HaeIII GGCC 115 115 . . 116 120 - BsrI ACTGG 116 114 . . 124 129 + HaeII RGCGCY 128 124 . . 125 128 + Hin6I GCGC 125 127 . . 125 128 + GlaI GCGC 126 126 . . 125 128 + HhaI GCGC 127 125 . . 128 131 + HpaII CCGG 128 130 . . 131 135 + HinfI GANTC 131 134 . . 131 135 - PleI GAGTC 125 126 . . 131 135 - MlyI GAGTC 125 125 . . 136 141 + SspI AATATT 138 138 . . 146 149 + SetI ASST 149 145 . . 148 153 + Hpy166II GTNNAC 150 150 . . 148 153 + HpaI GTTAAC 150 150 . . 148 153 + HindII GTYRAC 150 150 . . 149 152 + MseI TTAA 149 151 . . 161 164 + MnlI CCTC 171 170 . . 169 173 + BlsI GCNGC 171 170 . . 169 173 + BisI GCNGC 170 171 . . 169 173 + TseI GCWGC 169 172 . . 165 170 - BsrDI GCAATG 164 162 . . 171 176 + MstI* TGCGCA 173 173 . . 172 175 + Hin6I GCGC 172 174 . . 172 175 + GlaI GCGC 173 173 . . 172 175 + HhaI GCGC 174 172 . . 169 173 - BbvI GCAGC 156 160 . . 177 182 + Hpy166II GTNNAC 179 179 . . 184 188 - FokI GGATG 170 174 . . 184 188 - BseGI GGATG 183 181 . . 193 197 - TspDTI ATGAA 183 181 . . 201 207 + TspRI CASTGNN 207 198 . . 203 208 + SduI GDGCHC 207 203 . . 203 208 + HgiAI* GWGCWC 207 203 . . 205 215 + MwoI GCNNNNNNNGC 211 208 . . 206 211 + BmeT110I CYCGRG 207 209 . . 206 211 + AvaI CYCGRG 206 210 . . 207 212 + Hpy178III* TCNNGA 208 210 . . 209 213 + BslFI GGGAC 223 227 . . 211 215 + HgaI GACGC 220 225 . . 226 230 + MboII GAAGA 238 237 . . 226 231 - Ksp632I* CTCTTC 221 224 . . 232 236 + TauI GCSGC 235 232 . . 229 232 - MnlI CCTC 222 221 . . 232 236 + BlsI GCNGC 234 233 . . 232 236 + BisI GCNGC 233 234 . . 235 239 + TauI GCSGC 238 235 . . 235 239 + BlsI GCNGC 237 236 . . 235 239 + BisI GCNGC 236 237 . . 232 235 - AciI CCGC 232 234 . . 238 241 + Hin6I GCGC 238 240 . . 238 241 + GlaI GCGC 239 239 . . 238 241 + HhaI GCGC 240 238 . . 235 238 - AciI CCGC 235 237 . . 244 249 + AclI AACGTT 245 247 . . 245 248 + TaiI ACGT 248 244 . . 245 248 + SetI ASST 248 244 . . 245 248 + MaeII ACGT 245 247 . . 249 253 + Hpy188I TCNGA 251 250 . . 252 261 + XmnI GAANNNNTTC 256 256 . . 260 263 + TaqI TCGA 260 262 . . 264 267 + Csp6I GTAC 264 266 . . 264 267 + RsaI GTAC 265 265 . . 267 271 - BsrI ACTGG 267 265 . . 278 281 + SetI ASST 281 277 . . 288 291 + TspEI AATT 287 291 . . 291 295 + Hpy188I TCNGA 293 292 . . 295 298 + CviJI RGCY 296 296 . . 298 301 + MaeI CTAG 298 300 . . 301 306 + Hpy166II GTNNAC 303 303 . . 312 317 + AclI AACGTT 313 315 . . 313 316 + TaiI ACGT 316 312 . . 313 316 + SetI ASST 316 312 . . 313 316 + MaeII ACGT 313 315 . . 318 328 + MwoI GCNNNNNNNGC 324 321 . . 324 328 + BlsI GCNGC 326 325 . . 324 328 + BisI GCNGC 325 326 . . 324 328 + BbvI GCAGC 336 340 . . 324 328 + TseI GCWGC 324 327 . . 326 329 + SetI ASST 329 325 . . 326 329 + CviJI RGCY 327 327 . . 326 329 + AluI AGCT 327 327 . . 327 332 + Cac8I GCNNGC 329 329 . . 331 341 + MwoI GCNNNNNNNGC 337 334 . . 331 336 + Cac8I GCNNGC 333 333 . . 331 336 + BmtI GCTAGC 335 331 . . 331 336 + NheI GCTAGC 331 335 . . 332 335 + MaeI CTAG 332 334 . . 334 337 + SetI ASST 337 333 . . 334 337 + CviJI RGCY 335 335 . . 334 337 + AluI AGCT 335 335 . . 338 341 + AciI CCGC 338 340 . . 337 342 - EciI GGCGGA 327 325 . . 346 349 + MnlI CCTC 356 355 . . 344 349 - BseRI GAGGAG 335 333 . . 353 356 + AciI CCGC 353 355 . . 352 357 - EciI GGCGGA 342 340 . . 359 362 + CviRI* TGCA 360 360 . . 360 364 + SfaNI GCATC 369 373 . . 365 368 + CviRI* TGCA 366 366 . . 364 369 - BsgI GTGCAG 349 347 . . 376 381 + SspI AATATT 378 378 . . 381 385 + Hpy188I TCNGA 383 382 . . 384 388 - BccI CCATC 378 379 . . 393 396 + DpnI GATC 394 394 . . 393 396 + BstKTI GATC 395 393 . . 393 396 + MboI GATC 392 396 . . 402 405 + SetI ASST 405 401 . . 403 407 + Hin4II* CCTTC 413 412 . . 407 411 + BssKI CCNGG 406 411 . . 407 411 + ScrFI CCNGG 408 409 . . 407 411 + CauII* CCSGG 408 409 . . 408 411 + HpaII CCGG 408 410 . . 427 431 + BsmAI GTCTC 432 436 . . 424 428 - BsrI ACTGG 424 422 . . 429 433 + DdeI CTNAG 429 432 . . 429 433 + BspCNI CTCAG 442 440 . . 429 433 + BseMII CTCAG 443 441 . . 433 437 + SfaNI GCATC 442 446 . . 437 442 + TaqII CACCCA 453 451 . . 436 440 - HphI GGTGA 428 427 . . 459 462 + CviJI RGCY 460 460 . . 456 460 - Hin4II* CCTTC 450 449 . . 465 470 + Hpy166II GTNNAC 467 467 . . 465 470 + HindII GTYRAC 467 467 . . 472 476 + SfaNI GCATC 481 485 . . 476 479 + FnuDII* CGCG 477 477 . . 473 478 - BtgZI GCGATG 458 462 . . 490 493 + SetI ASST 493 489 . . 491 494 + MnlI CCTC 501 500 . . 494 497 + MnlI CCTC 504 503 . . 492 497 - BseRI GAGGAG 483 481 . . 501 511 + Hin4I GAYNNNNNVTC 492 487 524 519 507 511 + TfiI GAWTC 507 510 . . 507 511 + HinfI GANTC 507 510 . . 501 511 - Hin4I GAYNNNNNVTC 524 519 492 487 511 516 + EcoP15I CAGCAG 541 543 . . 522 527 + Hpy166II GTNNAC 524 524 . . 522 527 + HindII GTYRAC 524 524 . . 534 538 + BmgT120I GGNCC 535 536 . . 534 538 + AvaII GGWCC 534 537 . . 534 538 + AsuI* GGNCC 534 537 . . 543 547 + Hpy188I TCNGA 545 544 . . 545 550 + BclI TGATCA 545 549 . . 546 549 + DpnI GATC 547 547 . . 546 549 + BstKTI GATC 548 546 . . 546 549 + MboI GATC 545 549 . . 557 560 + SetI ASST 560 556 . . 557 560 + CviJI RGCY 558 558 . . 557 560 + AluI AGCT 558 558 . . 592 595 + FatI CATG 591 595 . . 592 595 + NlaIII CATG 595 591 . . 592 595 + CviAII CATG 592 594 . . 595 599 + HinfI GANTC 595 598 . . 595 599 - PleI GAGTC 589 590 . . 595 599 - MlyI GAGTC 589 589 . . 599 602 + HpaII CCGG 599 601 . . 601 604 + CviJI RGCY 602 602 . . 611 616 + Hpy178III* TCNNGA 612 614 . . 611 616 + BspHI TCATGA 611 615 . . 612 615 + FatI CATG 611 615 . . 612 615 + NlaIII CATG 615 611 . . 612 615 + CviAII CATG 612 614 . . 610 614 - TspDTI ATGAA 600 598 . . 620 624 + SfaNI GCATC 629 633 . . 627 631 + TauI GCSGC 630 627 . . 627 631 + BlsI GCNGC 629 628 . . 627 631 + BisI GCNGC 628 629 . . 629 632 + CviJI RGCY 630 630 . . 627 630 - AciI CCGC 627 629 . . 636 641 + Hpy178III* TCNNGA 637 639 . . 639 643 + FokI GGATG 652 656 . . 639 643 + BseGI GGATG 645 643 . . 646 650 + TspDTI ATGAA 661 659 . . 648 652 - Hin4II* CCTTC 642 641 . . 653 656 + CviJI RGCY 654 654 . . 656 661 + PsiI TTATAA 658 658 . . 672 675 + SetI ASST 675 671 . . 673 677 + HphI GGTGA 685 684 . . 674 678 + Tsp45I GTSAC 673 678 . . 671 674 - MnlI CCTC 664 663 . . 674 678 + MaeIII GTNAC 673 678 . . 689 692 + MaeI CTAG 689 691 . . 690 695 + TsoI TARCCA 706 704 . . 691 694 + CviJI RGCY 692 692 . . 697 702 + EcoP15I CAGCAG 727 729 . . 709 712 + CviRI* TGCA 710 710 . . 714 717 + CviJI RGCY 715 715 . . 718 723 + EcoRI GAATTC 718 722 . . 718 723 + ApoI RAATTY 718 722 . . 719 722 + TspEI AATT 718 722 . . 722 725 + TaqI TCGA 722 724 . . 722 727 + Hpy178III* TCNNGA 723 725 . . 728 733 + ApoI RAATTY 728 732 . . 729 732 + TspEI AATT 728 732 . . 755 759 + Tsp4CI* ACNGT 757 756 . . 762 767 + Hpy166II GTNNAC 764 764 . . 769 773 + Hpy188I TCNGA 771 770 . . 770 774 + DdeI CTNAG 770 773 . . 770 774 - BspCNI CTCAG 762 760 . . 770 774 - BseMII CTCAG 761 759 . . 775 779 + TfiI GAWTC 775 778 . . 772 775 - MnlI CCTC 765 764 . . 775 779 + HinfI GANTC 775 778 . . 778 782 - MboII GAAGA 770 769 . . 787 790 + Csp6I GTAC 787 789 . . 787 790 + RsaI GTAC 788 788 . . 789 793 + Tsp4CI* ACNGT 791 790 . . 800 803 + MnlI CCTC 810 809 . . 805 808 + SetI ASST 808 804 . . 806 809 + MnlI CCTC 816 815 . . 807 812 + Ksp632I* CTCTTC 813 816 . . 808 812 - MboII GAAGA 800 799 . . 813 817 + TauI GCSGC 816 813 . . 813 817 + BlsI GCNGC 815 814 . . 813 817 + BisI GCNGC 814 815 . . 814 817 + AciI CCGC 814 816 . . 825 829 + TspGWI ACGGA 840 838 . . 822 826 - BsmAI GTCTC 816 820 . . 822 827 - Esp3I CGTCTC 816 820 . . 830 834 - FokI GGATG 816 820 . . 830 834 - BseGI GGATG 829 827 . . 840 845 + Hpy166II GTNNAC 842 842 . . 840 845 + AccI GTMKAC 841 843 . . 844 847 + SetI ASST 847 843 . . 845 849 + Hin4II* CCTTC 855 854 . . 853 857 + HgaI GACGC 862 867 . . 853 858 + AcyI GRCGYC 854 856 . . 862 866 - HgaI GACGC 851 856 . . 865 869 - MboII GAAGA 857 856 . . 864 869 - BbvII* GAAGAC 857 861 . . 868 872 - MboII GAAGA 860 859 . . 870 874 - TspDTI ATGAA 860 858 . . 880 884 - MboII GAAGA 872 871 . . 888 893 + Cac8I GCNNGC 890 890 . . 898 901 + TspEI AATT 897 901 . . 904 909 + ClaI ATCGAT 905 907 . . 905 908 + TaqI TCGA 905 907 . . 911 915 - TspDTI ATGAA 901 899 . . 929 932 + CviJI RGCY 930 930 . . 930 940 + MwoI GCNNNNNNNGC 936 933 . . 932 942 + BsiYI* CCNNNNNNNGG 938 935 . . 941 947 + PpuMI RGGWCCY 942 945 . . 941 947 + DraII RGGNCCY 942 945 . . 941 945 + BslFI GGGAC 955 959 . . 941 946 + NlaIV GGNNCC 943 943 . . 942 946 + BmgT120I GGNCC 943 944 . . 942 946 + AvaII GGWCC 942 945 . . 942 946 + AsuI* GGNCC 942 945 . . 939 942 - AciI CCGC 939 941 . . 939 943 - FauI CCCGC 932 934 . . 944 947 + SetI ASST 947 943 . . 954 958 - BsrI ACTGG 954 952 . . 971 976 + Hpy178III* TCNNGA 972 974 . . 974 979 + BclI TGATCA 974 978 . . 975 978 + DpnI GATC 976 976 . . 975 978 + BstKTI GATC 977 975 . . 975 978 + MboI GATC 974 978 . . 980 984 + TspDTI ATGAA 995 993 . . 988 992 + BmgT120I GGNCC 989 990 . . 988 992 + AvaII GGWCC 988 991 . . 988 992 + AsuI* GGNCC 988 991 . . 990 995 + Hpy178III* TCNNGA 991 993 . . 1015 1018 + MseI TTAA 1015 1017 . . 1021 1024 + HpaII CCGG 1021 1023 . . 1026 1031 + ApoI RAATTY 1026 1030 . . 1027 1030 + TspEI AATT 1026 1030 . . 1047 1050 + SetI ASST 1050 1046 . . 1046 1049 - MnlI CCTC 1039 1038 . . 1052 1056 + MaeIII GTNAC 1051 1056 . . 1050 1055 - TsoI TARCCA 1040 1038 . . 1061 1066 + ApoI RAATTY 1061 1065 . . 1062 1065 + TspEI AATT 1061 1065 . . 1070 1073 + Csp6I GTAC 1070 1072 . . 1070 1073 + RsaI GTAC 1071 1071 . . 1083 1092 + BsaBI GATNNNNATC 1087 1087 . . 1083 1087 - BccI CCATC 1077 1078 . . 1092 1097 + SmlI CTYRAG 1092 1096 . . 1096 1099 + SetI ASST 1099 1095 . . 1092 1097 - Bce83I* CTTGAG 1077 1075 . . 1101 1111 + MwoI GCNNNNNNNGC 1107 1104 . . 1106 1111 + Cac8I GCNNGC 1108 1108 . . 1110 1113 - AciI CCGC 1110 1112 . . 1122 1126 + Hpy188I TCNGA 1124 1123 . . 1125 1128 + DpnI GATC 1126 1126 . . 1125 1128 + BstKTI GATC 1127 1125 . . 1125 1128 + MboI GATC 1124 1128 . . 1127 1131 + Hpy188I TCNGA 1129 1128 . . 1140 1145 + NlaIV GGNNCC 1142 1142 . . 1140 1145 + HgiCI* GGYRCC 1140 1144 . . 1144 1154 + BsiYI* CCNNNNNNNGG 1150 1147 . . 1153 1157 + BmgT120I GGNCC 1154 1155 . . 1153 1157 + AvaII GGWCC 1153 1156 . . 1153 1157 + AsuI* GGNCC 1153 1156 . . 1155 1160 + Hpy178III* TCNNGA 1156 1158 . . 1171 1181 + Hin4I GAYNNNNNVTC 1162 1157 1194 1189 1177 1181 + TfiI GAWTC 1177 1180 . . 1177 1181 + HinfI GANTC 1177 1180 . . 1171 1181 - Hin4I GAYNNNNNVTC 1194 1189 1162 1157 1191 1194 + CviJI RGCY 1192 1192 . . 1201 1206 + AclI AACGTT 1202 1204 . . 1202 1205 + TaiI ACGT 1205 1201 . . 1202 1205 + SetI ASST 1205 1201 . . 1202 1205 + MaeII ACGT 1202 1204 . . 1204 1208 + MaeIII GTNAC 1203 1208 . . 1214 1217 + MaeI CTAG 1214 1216 . . 1224 1230 + TspRI CASTGNN 1230 1221 . . 1225 1229 + BsrI ACTGG 1230 1228 . . 1229 1234 + BsgI GTGCAG 1250 1248 . . 1230 1233 + CviRI* TGCA 1231 1231 . . 1231 1241 + MwoI GCNNNNNNNGC 1237 1234 . . 1231 1241 + BstAPI GCANNNNNTGC 1237 1234 . . 1232 1240 + AlwNI CAGNNNCTG 1237 1234 . . 1233 1236 + SetI ASST 1236 1232 . . 1231 1236 - BspMI ACCTGC 1222 1226 . . 1237 1247 + MwoI GCNNNNNNNGC 1243 1240 . . 1237 1241 + BlsI GCNGC 1239 1238 . . 1237 1241 + BisI GCNGC 1238 1239 . . 1237 1241 + TseI GCWGC 1237 1240 . . 1231 1237 - AarI CACCTGC 1222 1226 . . 1240 1250 + MwoI GCNNNNNNNGC 1246 1243 . . 1237 1241 - BbvI GCAGC 1224 1228 . . 1246 1256 + MwoI GCNNNNNNNGC 1252 1249 . . 1246 1250 + BlsI GCNGC 1248 1247 . . 1246 1250 + BisI GCNGC 1247 1248 . . 1246 1250 + TseI GCWGC 1246 1249 . . 1244 1249 - EcoP15I CAGCAG 1216 1218 . . 1249 1259 + MwoI GCNNNNNNNGC 1255 1252 . . 1246 1250 - BbvI GCAGC 1233 1237 . . 1255 1259 + BlsI GCNGC 1257 1256 . . 1255 1259 + BisI GCNGC 1256 1257 . . 1255 1259 + TseI GCWGC 1255 1258 . . 1253 1258 - EcoP15I CAGCAG 1225 1227 . . 1258 1262 + BlsI GCNGC 1260 1259 . . 1258 1262 + BisI GCNGC 1259 1260 . . 1258 1262 + TseI GCWGC 1258 1261 . . 1255 1259 - BbvI GCAGC 1242 1246 . . 1256 1261 - EcoP15I CAGCAG 1228 1230 . . 1258 1262 - BbvI GCAGC 1245 1249 . . 1271 1274 + Csp6I GTAC 1271 1273 . . 1271 1274 + RsaI GTAC 1272 1272 . . 1276 1279 + TspEI AATT 1275 1279 . . 1282 1285 + TaiI ACGT 1285 1281 . . 1282 1285 + SetI ASST 1285 1281 . . 1282 1285 + MaeII ACGT 1282 1284 . . 1284 1289 + Hpy166II GTNNAC 1286 1286 . . 1284 1289 + AccI GTMKAC 1285 1287 . . 1289 1294 + PstI CTGCAG 1293 1289 . . 1289 1294 + SfeI* CTRYAG 1289 1293 . . 1290 1293 + CviRI* TGCA 1291 1291 . . 1291 1296 + BtsI GCAGTG 1298 1296 . . 1292 1298 + TspRI CASTGNN 1298 1289 . . 1302 1305 + SetI ASST 1305 1301 . . 1303 1308 + StyI CCWWGG 1303 1307 . . 1303 1308 + SecI* CCNNGG 1303 1307 . . 1303 1308 + AvrII CCTAGG 1303 1307 . . 1304 1307 + MaeI CTAG 1304 1306 . . 1313 1316 + CviJI RGCY 1314 1314 . . 1316 1326 + BsiYI* CCNNNNNNNGG 1322 1319 . . 1321 1326 + SecI* CCNNGG 1321 1325 . . 1322 1326 + BssKI CCNGG 1321 1326 . . 1322 1326 + BseBI CCWGG 1323 1324 . . 1322 1326 + ScrFI CCNGG 1323 1324 . . 1322 1326 + EcoRII CCWGG 1321 1326 . . 1325 1328 + CviJI RGCY 1326 1326 . . 1325 1328 + HaeIII GGCC 1326 1326 . . 1335 1345 + FalI AAGNNNNNCTT 1326 1321 1358 1353 1336 1341 + XhoII RGATCY 1336 1340 . . 1336 1341 + BglII AGATCT 1336 1340 . . 1337 1340 + DpnI GATC 1338 1338 . . 1337 1340 + BstKTI GATC 1339 1337 . . 1337 1340 + MboI GATC 1336 1340 . . 1335 1345 - FalI AAGNNNNNCTT 1358 1353 1326 1321 1347 1350 + FatI CATG 1346 1350 . . 1347 1350 + NlaIII CATG 1350 1346 . . 1347 1350 + CviAII CATG 1347 1349 . . 1350 1354 - BslFI GGGAC 1335 1339 . . 1363 1366 + Hin6I GCGC 1363 1365 . . 1363 1366 + GlaI GCGC 1364 1364 . . 1363 1366 + HhaI GCGC 1365 1363 . . 1381 1384 - MnlI CCTC 1374 1373 . . 1384 1388 + HgaI GACGC 1393 1398 . . 1384 1389 + AcyI GRCGYC 1385 1387 . . 1394 1397 + MnlI CCTC 1404 1403 . . 1400 1403 + TaqI TCGA 1400 1402 . . 1402 1406 + HinfI GANTC 1402 1405 . . 1402 1406 - PleI GAGTC 1396 1397 . . 1402 1406 - MlyI GAGTC 1396 1396 . . 1422 1426 + BmgT120I GGNCC 1423 1424 . . 1422 1426 + AsuI* GGNCC 1422 1425 . . 1423 1426 + CviJI RGCY 1424 1424 . . 1423 1426 + HaeIII GGCC 1424 1424 . . 1430 1433 + MnlI CCTC 1440 1439 . . 1447 1451 - TspDTI ATGAA 1437 1435 . . 1451 1454 + MseI TTAA 1451 1453 . . 1479 1484 + Hpy166II GTNNAC 1481 1481 . . 1489 1492 + SetI ASST 1492 1488 . . 1490 1493 + MnlI CCTC 1500 1499 . . 1498 1508 + BsaXI ACNNNNNCTCC 1488 1485 1518 1515 1501 1505 - MboII GAAGA 1493 1492 . . 1513 1517 + BmgT120I GGNCC 1514 1515 . . 1513 1517 + AsuI* GGNCC 1513 1516 . . 1514 1517 + CviJI RGCY 1515 1515 . . 1514 1517 + HaeIII GGCC 1515 1515 . . 1521 1526 + XhoII RGATCY 1521 1525 . . 1522 1525 + DpnI GATC 1523 1523 . . 1522 1525 + BstKTI GATC 1524 1522 . . 1522 1525 + MboI GATC 1521 1525 . . 1524 1529 + MmeI TCCRAC 1549 1547 . . 1522 1526 - BinI* GGATC 1516 1517 . . 1528 1532 + Tsp4CI* ACNGT 1530 1529 . . 1532 1535 + CviRI* TGCA 1533 1533 . . 1535 1540 + ApoI RAATTY 1535 1539 . . 1536 1539 + TspEI AATT 1535 1539 . . 1547 1550 + SetI ASST 1550 1546 . . 1549 1552 + MaeI CTAG 1549 1551 . . 1552 1556 + SfaNI GCATC 1561 1565 . . 1556 1560 + Hin4II* CCTTC 1566 1565 . . 1553 1557 - FokI GGATG 1539 1543 . . 1553 1557 - BseGI GGATG 1552 1550 . . 1566 1571 + TaqII CACCCA 1582 1580 . . 1569 1574 + DsaI* CCRYGG 1569 1573 . . 1569 1574 + SecI* CCNNGG 1569 1573 . . 1571 1575 + Tsp4CI* ACNGT 1573 1572 . . 1573 1579 + BstEII GGTNACC 1573 1578 . . 1574 1578 + Tsp45I GTSAC 1573 1578 . . 1574 1578 + MaeIII GTNAC 1573 1578 . . 1577 1582 + Cfr10I RCCGGY 1577 1581 . . 1577 1582 + BetI* WCCGGW 1577 1581 . . 1577 1582 + AgeI ACCGGT 1577 1581 . . 1578 1581 + HpaII CCGG 1578 1580 . . 1575 1579 - HphI GGTGA 1567 1566 . . 1584 1588 - TspDTI ATGAA 1574 1572 . . 1590 1596 + PfoI TCCNGGA 1590 1595 . . 1591 1595 + BssKI CCNGG 1590 1595 . . 1591 1594 + HpaII CCGG 1591 1593 . . 1591 1595 + ScrFI CCNGG 1592 1593 . . 1591 1595 + CauII* CCSGG 1592 1593 . . 1617 1627 + FalI AAGNNNNNCTT 1608 1603 1640 1635 1617 1627 - FalI AAGNNNNNCTT 1640 1635 1608 1603 1643 1646 + SetI ASST 1646 1642 . . 1643 1646 + CviJI RGCY 1644 1644 . . 1643 1646 + AluI AGCT 1644 1644 . . 1644 1654 + MwoI GCNNNNNNNGC 1650 1647 . . 1649 1653 + Hpy99I CGWCG 1653 1648 . . 1653 1663 + MwoI GCNNNNNNNGC 1659 1656 . . 1653 1663 + BglI GCCNNNNNGGC 1659 1656 . . 1657 1662 + NspBII* CMGCKG 1659 1659 . . 1659 1663 + TauI GCSGC 1662 1659 . . 1659 1663 + BlsI GCNGC 1661 1660 . . 1659 1663 + BisI GCNGC 1660 1661 . . 1662 1666 + BlsI GCNGC 1664 1663 . . 1662 1666 + BisI GCNGC 1663 1664 . . 1662 1666 + BbvI GCAGC 1674 1678 . . 1662 1666 + TseI GCWGC 1662 1665 . . 1659 1662 - AciI CCGC 1659 1661 . . 1664 1667 + SetI ASST 1667 1663 . . 1664 1667 + CviJI RGCY 1665 1665 . . 1664 1667 + AluI AGCT 1665 1665 . . 1690 1695 + TaqII CACCCA 1706 1704 . . 1689 1693 - HphI GGTGA 1681 1680 . . 1693 1697 - BsrI ACTGG 1693 1691 . . 1692 1697 - BfiI ACTGGG 1687 1686 . . 1699 1703 + Hin4II* CCTTC 1709 1708 . . 1703 1707 + DdeI CTNAG 1703 1706 . . 1703 1707 + BspCNI CTCAG 1716 1714 . . 1703 1707 + BseMII CTCAG 1717 1715 . . 1707 1710 + Csp6I GTAC 1707 1709 . . 1707 1710 + RsaI GTAC 1708 1708 . . 1713 1717 + BsmAI GTCTC 1718 1722 . . 1710 1714 - BsrI ACTGG 1710 1708 . . 1730 1733 + TaiI ACGT 1733 1729 . . 1730 1733 + SetI ASST 1733 1729 . . 1730 1733 + MaeII ACGT 1730 1732 . . 1736 1739 + MnlI CCTC 1746 1745 . . 1732 1736 - BslFI GGGAC 1717 1721 . . 1737 1742 + Ksp632I* CTCTTC 1743 1746 . . 1738 1742 - MboII GAAGA 1730 1729 . . 1741 1745 - HphI GGTGA 1733 1732 . . 1749 1752 + FnuDII* CGCG 1750 1750 . . 1750 1753 + Hin6I GCGC 1750 1752 . . 1750 1753 + GlaI GCGC 1751 1751 . . 1750 1753 + HhaI GCGC 1752 1750 . . 1752 1757 + Cac8I GCNNGC 1754 1754 . . 1759 1762 + MnlI CCTC 1769 1768 . . 1757 1762 - BseRI GAGGAG 1748 1746 . . 1771 1774 + MnlI CCTC 1781 1780 . . 1776 1779 + SetI ASST 1779 1775 . . 1783 1787 + HphI GGTGA 1795 1794 . . 1788 1799 + BdaI TGANNNNNNTCA 1777 1775 1811 1809 1788 1793 + BclI TGATCA 1788 1792 . . 1789 1792 + DpnI GATC 1790 1790 . . 1789 1792 + BstKTI GATC 1791 1789 . . 1789 1798 + BsaBI GATNNNNATC 1793 1793 . . 1789 1792 + MboI GATC 1788 1792 . . 1788 1799 - BdaI TGANNNNNNTCA 1811 1809 1777 1775 1813 1818 + Cac8I GCNNGC 1815 1815 . . 1813 1818 + BmtI GCTAGC 1817 1813 . . 1813 1818 + NheI GCTAGC 1813 1817 . . 1814 1817 + MaeI CTAG 1814 1816 . . 1824 1829 + PsiI TTATAA 1826 1826 . . 1848 1851 + SetI ASST 1851 1847 . . 1848 1851 + CviJI RGCY 1849 1849 . . 1848 1851 + AluI AGCT 1849 1849 . . 1876 1879 + SetI ASST 1879 1875 . . 1877 1880 + MnlI CCTC 1887 1886 . . 1888 1893 + StyI CCWWGG 1888 1892 . . 1888 1893 + SecI* CCNNGG 1888 1892 . . 1900 1903 + TspEI AATT 1899 1903 . . 1904 1910 + TspRI CASTGNN 1910 1901 . . 1907 1918 + BdaI TGANNNNNNTCA 1896 1894 1930 1928 1908 1917 + XmnI GAANNNNTTC 1912 1912 . . 1912 1915 + TspEI AATT 1911 1915 . . 1907 1918 - BdaI TGANNNNNNTCA 1930 1928 1896 1894 1918 1923 + ApoI RAATTY 1918 1922 . . 1919 1922 + TspEI AATT 1918 1922 . . 1921 1926 + AhaIII* TTTAAA 1923 1923 . . 1922 1925 + MseI TTAA 1922 1924 . . #--------------------------------------- # # # AarI: # [CACCTGC] # 722 1222 # # AccI: # [GTMKAC] # 444 659 841 # # AciI: # [CCGC] # 3 11 15 98 103 123 # 125 171 187 274 285 549 # # AclI: # [AACGTT] # 68 245 742 889 # # AcyI: # [GRCGYC] # 531 559 854 # # AgeI: # [ACCGGT] # 367 1577 # # AhaIII*: # [TTTAAA] # 21 1923 # # AluI: # [AGCT] # 8 21 95 184 223 327 # 1086 # # AlwNI: # [CAGNNNCTG] # 707 1237 # # ApoI: # [RAATTY] # 10 26 35 298 383 474 # 718 # # AsuI*: # [GGNCC] # 46 91 165 269 408 431 # 534 # # AvaI: # [CYCGRG] # 206 1738 # # AvaII: # [GGWCC] # 46 165 408 534 791 # # AvrII: # [CCTAGG] # 641 1303 # # BbvI: # [GCAGC] # 3 9 9 156 180 270 # 429 888 # # BbvII*: # [GAAGAC] # 857 1087 # # BccI: # [CCATC] # 378 699 867 # # Bce83I*: # [CTTGAG] # 867 1077 # # BclI: # [TGATCA] # 156 429 545 814 # # BdaI: # [TGANNNNNNTCA] # 0 0 0 0 14 34 # 34 85 1777 # # BetI*: # [WCCGGW] # 367 1577 # # BfiI: # [ACTGGG] # 257 1687 # # BglI: # [GCCNNNNNGGC] # 285 1659 # # BglII: # [AGATCT] # 608 1336 # # BinI*: # [GGATC] # 428 1516 # # BisI: # [GCNGC] # 3 3 3 9 9 61 # 63 89 109 186 281 303 # 401 424 # # BlsI: # [GCNGC] # 3 3 3 9 9 61 # 63 89 110 186 280 303 # 401 424 # # BmeT110I: # [CYCGRG] # 207 1737 # # BmgT120I: # [GGNCC] # 46 91 165 269 408 430 # 535 # # BmtI: # [GCTAGC] # 127 335 1482 # # BsaBI: # [GATNNNNATC] # 151 706 1087 # # BsaXI: # [ACNNNNNCTCC] # 30 426 1488 # # BseBI: # [CCWGG] # 58 621 1265 # # BseGI: # [GGATG] # 183 184 392 462 723 # # BseMII: # [CTCAG] # 227 318 443 956 # # BseRI: # [GAGGAG] # 148 196 335 1265 # # BsgI: # [GTGCAG] # 349 694 901 # # BsiYI*: # [CCNNNNNNNGG] # 172 212 622 938 # # BslFI: # [GGGAC] # 108 115 227 380 382 732 # # BsmAI: # [GTCTC] # 79 226 353 384 902 # # BspCNI: # [CTCAG] # 228 320 442 954 # # BspHI: # [TCATGA] # 611 1333 # # BspMI: # [ACCTGC] # 722 1222 # # BsrDI: # [GCAATG] # 164 1780 # # BsrI: # [ACTGG] # 17 18 98 151 157 234 # 276 463 530 # # BssKI: # [CCNGG] # 56 269 350 354 915 # # BstAPI: # [GCANNNNNTGC] # 707 1237 # # BstEII: # [GGTNACC] # 371 1573 # # BstKTI: # [GATC] # 150 153 153 185 212 267 # 395 429 # # BtgZI: # [GCGATG] # 458 1486 # # BtsI: # [GCAGTG] # 646 1298 # # Cac8I: # [GCNNGC] # 4 61 113 129 216 218 # 557 646 # # CauII*: # [CCSGG] # 352 408 1184 # # Cfr10I: # [RCCGGY] # 111 367 1466 # # CfrI: # [YGGCCR] # 113 1831 # # ClaI: # [ATCGAT] # 905 1039 # # Csp6I: # [GTAC] # 37 54 173 201 237 283 # 436 523 # # CviAII: # [CATG] # 20 592 597 735 # # CviJI: # [RGCY] # 8 12 21 23 24 28 # 31 38 44 91 95 98 # 98 115 122 125 129 181 # 184 215 262 # # CviRI*: # [TGCA] # 6 60 242 344 360 411 # 521 # # DdeI: # [CTNAG] # 241 341 429 933 # # DpnI: # [GATC] # 150 153 154 185 212 267 # 394 429 # # DraII: # [RGGNCCY] # 942 1002 # # DsaI*: # [CCRYGG] # 375 1569 # # EciI: # [GGCGGA] # 15 327 1602 # # EcoP15I: # [CAGCAG] # 3 9 186 489 541 716 # # EcoRI: # [GAATTC] # 718 1226 # # EcoRII: # [CCWGG] # 56 623 1265 # # Esp3I: # [CGTCTC] # 79 737 1128 # # FalI: # [AAGNNNNNCTT] # 0 0 0 0 32 32 # 250 304 1326 # # FatI: # [CATG] # 20 591 598 735 # # FauI: # [CCCGC] # 18 914 1012 # # FnuDII*: # [CGCG] # 194 477 1273 # # FokI: # [GGATG] # 164 170 405 482 723 # # GlaI: # [GCGC] # 47 66 126 193 387 1125 # # HaeII: # [RGCGCY] # 128 1816 # # HaeIII: # [GGCC] # 91 98 115 429 1211 # # HgaI: # [GACGC] # 11 61 159 531 551 631 # # HgiAI*: # [GWGCWC] # 207 1737 # # HgiCI*: # [GGYRCC] # 804 1140 # # HhaI: # [GCGC] # 47 66 127 192 387 1125 # # Hin4I: # [GAYNNNNNVTC] # 0 0 0 0 32 32 # 32 88 372 638 750 # # Hin4II*: # [CCTTC] # 37 143 192 213 235 413 # 711 # # Hin6I: # [GCGC] # 47 66 125 194 387 1125 # # HindII: # [GTYRAC] # 57 150 317 1420 # # HinfI: # [GANTC] # 28 88 103 180 225 376 # 402 542 # # HpaI: # [GTTAAC] # 150 1794 # # HpaII: # [CCGG] # 13 16 112 191 280 353 # 422 557 # # HphI: # [GGTGA] # 52 62 114 149 257 428 # 882 # # Hpy166II: # [GTNNAC] # 29 39 57 78 111 124 # 164 195 240 444 463 # # Hpy178III*: # [TCNNGA] # 19 25 86 165 208 249 # 404 788 # # Hpy188I: # [TCNGA] # 5 42 90 162 226 251 # 353 815 # # Hpy99I: # [CGWCG] # 291 1653 # # Ksp632I*: # [CTCTTC] # 201 221 592 930 # # MaeI: # [CTAG] # 34 90 130 245 265 298 # 357 525 # # MaeII: # [ACGT] # 68 80 214 245 448 889 # # MaeIII: # [GTNAC] # 28 152 370 371 378 645 # # MboI: # [GATC] # 150 153 156 185 212 267 # 392 429 # # MboII: # [GAAGA] # 3 12 30 57 214 237 # 238 532 621 # # MlyI: # [GAGTC] # 28 97 464 548 807 # # MmeI: # [TCCRAC] # 395 1549 # # MnlI: # [CCTC] # 3 6 12 23 30 36 # 45 51 57 60 80 91 # 101 106 134 145 160 223 # 246 335 # # MroNI: # [GCCGGC] # 111 1833 # # MseI: # [TTAA] # 20 22 23 106 436 471 # 866 # # MstI*: # [TGCGCA] # 173 1771 # # MwoI: # [GCNNNNNNNGC] # 3 3 6 6 9 13 # 113 130 171 211 285 395 # 599 # # NaeI: # [GCCGGC] # 113 1831 # # NheI: # [GCTAGC] # 131 331 1482 # # NlaIII: # [CATG] # 20 594 595 735 # # NlaIV: # [GGNNCC] # 199 802 943 # # NspBII*: # [CMGCKG] # 285 1659 # # PfoI: # [TCCNGGA] # 354 1590 # # PleI: # [GAGTC] # 28 97 464 548 807 # # PpuMI: # [RGGWCCY] # 942 1002 # # PsiI: # [TTATAA] # 118 658 1168 # # PstI: # [CTGCAG] # 651 1293 # # RsaI: # [GTAC] # 38 54 173 201 236 283 # 436 523 # # ScrFI: # [CCNGG] # 58 269 350 352 915 # # SduI: # [GDGCHC] # 207 1737 # # SecI*: # [CCNNGG] # 18 56 56 248 319 1247 # # SetI: # [ASST] # 8 13 20 21 28 31 # 33 35 39 46 49 49 # 58 65 66 66 67 68 # 72 83 88 96 99 100 # 103 106 115 133 187 # # SfaNI: # [GCATC] # 39 73 148 369 383 932 # # SfeI*: # [CTRYAG] # 655 1289 # # SmlI: # [CTYRAG] # 852 1092 # # SspI: # [AATATT] # 138 240 1566 # # StyI: # [CCWWGG] # 56 585 1303 # # TaiI: # [ACGT] # 68 80 211 248 448 889 # # TaqI: # [TCGA] # 183 260 462 495 544 # # TaqII: # [CACCCA] # 124 238 453 1129 # # TauI: # [GCSGC] # 3 111 124 186 282 392 # 846 # # TfiI: # [GAWTC] # 268 402 507 767 # # TseI: # [GCWGC] # 3 9 9 155 169 282 # 404 913 # # TsoI: # [TARCCA] # 334 706 904 # # Tsp45I: # [GTSAC] # 28 371 645 900 # # Tsp4CI*: # [ACNGT] # 8 28 34 43 371 721 # 739 # # TspDTI: # [ATGAA] # 16 41 61 94 137 167 # 199 370 417 442 # # TspEI: # [AATT] # 7 10 12 26 35 129 # 169 214 260 287 364 431 # # TspGWI: # [ACGGA] # 61 779 1104 # # TspRI: # [CASTGNN] # 33 34 68 174 612 1023 # # XhoII: # [RGATCY] # 185 423 1336 # # XmnI: # [GAANNNNTTC] # 32 256 1656 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 1944 # Reported_sequences: 1 # Reported_hitcount: 560 #---------------------------------------