Restriction Fragments for SNF1/YDR477W



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The currently selected gene/sequence is :

SNF1/YDR477W on chromosome IV from coordinates 1412373 to 1414274.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.22222.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 8 12 + MaeIII GTNAC 7 12 . . 26 34 + AlwNI CAGNNNCTG 31 28 . . 29 35 + AarI CACCTGC 39 43 . . 30 33 + SetI ASST 33 29 . . 30 35 + BspMI ACCTGC 39 43 . . 39 42 + CviRI* TGCA 40 40 . . 42 47 + ApoI RAATTY 42 46 . . 43 46 + TspEI AATT 42 46 . . 47 50 + MaeI CTAG 47 49 . . 48 53 + TsoI TARCCA 64 62 . . 49 52 + CviJI RGCY 50 50 . . 63 67 + BccI CCATC 71 72 . . 66 70 - HphI GGTGA 58 57 . . 72 76 + BccI CCATC 80 81 . . 75 79 - HphI GGTGA 67 66 . . 84 98 + XcmI CCANNNNNNNNNTGG 91 90 . . 84 88 + BccI CCATC 92 93 . . 88 97 + MslI CAYNNNNRTG 92 92 . . 89 93 + Tsp4CI* ACNGT 91 90 . . 94 97 + FatI CATG 93 97 . . 94 97 + NlaIII CATG 97 93 . . 94 97 + CviAII CATG 94 96 . . 97 102 + EciI GGCGGA 113 111 . . 98 101 - AciI CCGC 98 100 . . 109 112 + TaqI TCGA 109 111 . . 110 114 + Hpy99I CGWCG 114 109 . . 111 115 + HgaI GACGC 120 125 . . 127 137 + FalI AAGNNNNNCTT 118 113 150 145 134 140 + Bpu10I CCTNAGC 135 138 . . 135 139 + DdeI CTNAG 135 138 . . 127 137 - FalI AAGNNNNNCTT 150 145 118 113 139 149 + MwoI GCNNNNNNNGC 145 142 . . 141 145 + FokI GGATG 154 158 . . 141 145 + BseGI GGATG 147 145 . . 139 142 - AciI CCGC 139 141 . . 146 151 + Hpy166II GTNNAC 148 148 . . 146 151 + SduI GDGCHC 150 146 . . 142 146 - BccI CCATC 136 137 . . 146 151 + BseSI GKGCMC 150 146 . . 146 151 + ApaLI GTGCAC 146 150 . . 146 151 + HgiAI* GWGCWC 150 146 . . 147 150 + CviRI* TGCA 148 148 . . 155 160 + Hpy178III* TCNNGA 156 158 . . 180 185 - GsaI CCCAGC 184 180 . . 180 185 - BseYI CCCAGC 180 184 . . 190 196 + PpuMI RGGWCCY 191 194 . . 187 190 - MnlI CCTC 180 179 . . 190 196 + DraII RGGNCCY 191 194 . . 190 195 + NlaIV GGNNCC 192 192 . . 191 195 + BmgT120I GGNCC 192 193 . . 191 195 + AvaII GGWCC 191 194 . . 191 195 + AsuI* GGNCC 191 194 . . 206 209 + MseI TTAA 206 208 . . 209 212 + TspEI AATT 208 212 . . 231 235 + BmgT120I GGNCC 232 233 . . 231 235 + AsuI* GGNCC 231 234 . . 232 235 + CviJI RGCY 233 233 . . 232 235 + HaeIII GGCC 233 233 . . 256 261 + VspI ATTAAT 257 259 . . 257 260 + MseI TTAA 257 259 . . 266 269 + SetI ASST 269 265 . . 264 268 - Hin4II* CCTTC 258 257 . . 287 290 + CviRI* TGCA 288 288 . . 297 300 + TspEI AATT 296 300 . . 318 322 + Hpy188I TCNGA 320 319 . . 319 323 + DdeI CTNAG 319 322 . . 323 327 + HinfI GANTC 323 326 . . 319 323 - BspCNI CTCAG 311 309 . . 319 323 - BseMII CTCAG 310 308 . . 321 325 - BsmAI GTCTC 315 319 . . 327 332 + SmlI CTYRAG 327 331 . . 323 327 - PleI GAGTC 317 318 . . 323 327 - MlyI GAGTC 317 317 . . 327 332 + AflII CTTAAG 327 331 . . 328 331 + MseI TTAA 328 330 . . 351 355 + Tsp4CI* ACNGT 353 352 . . 377 381 + TspDTI ATGAA 392 390 . . 389 394 - TsoI TARCCA 379 377 . . 399 402 + Csp6I GTAC 399 401 . . 399 402 + RsaI GTAC 400 400 . . 404 408 + BssKI CCNGG 403 408 . . 404 407 + HpaII CCGG 404 406 . . 404 408 + ScrFI CCNGG 405 406 . . 404 408 + CauII* CCSGG 405 406 . . 413 416 + TspEI AATT 412 416 . . 432 436 + Hpy188I TCNGA 434 433 . . 437 441 - BsmAI GTCTC 431 435 . . 449 454 + Cac8I GCNNGC 451 451 . . 457 460 - MnlI CCTC 450 449 . . 464 468 + MboII GAAGA 476 475 . . 475 480 + EcoP15I CAGCAG 505 507 . . 480 483 + DpnI GATC 481 481 . . 480 483 + BstKTI GATC 482 480 . . 480 483 + MboI GATC 479 483 . . 486 492 + TspRI CASTGNN 492 483 . . 492 496 + Hpy99I CGWCG 496 491 . . 494 497 + TaqI TCGA 494 496 . . 490 494 - BceAI ACGGC 475 477 . . 497 502 + TatI WGTACW 497 501 . . 497 502 + ScaI AGTACT 499 499 . . 498 501 + Csp6I GTAC 498 500 . . 498 501 + RsaI GTAC 499 499 . . 516 519 + TspEI AATT 515 519 . . 528 533 + XhoII RGATCY 528 532 . . 528 533 + BglII AGATCT 528 532 . . 529 532 + DpnI GATC 530 530 . . 529 532 + BstKTI GATC 531 529 . . 529 532 + MboI GATC 528 532 . . 531 535 + Hpy188I TCNGA 533 532 . . 532 537 + Eco57MI CTGRAG 553 551 . . 532 537 + Eco57I CTGAAG 553 551 . . 536 539 + CviJI RGCY 537 537 . . 553 556 + MaeI CTAG 553 555 . . 556 565 + BsaBI GATNNNNATC 560 560 . . 561 565 + SfaNI GCATC 570 574 . . 562 571 + MslI CAYNNNNRTG 566 566 . . 564 568 + Hpy188I TCNGA 566 565 . . 602 607 + Hpy178III* TCNNGA 603 605 . . 602 607 + BspHI TCATGA 602 606 . . 603 606 + FatI CATG 602 606 . . 603 606 + NlaIII CATG 606 602 . . 603 606 + CviAII CATG 603 605 . . 610 614 - BccI CCATC 604 605 . . 616 619 + TspEI AATT 615 619 . . 622 625 + MseI TTAA 622 624 . . 646 649 + TspEI AATT 645 649 . . 652 656 + TauI GCSGC 655 652 . . 652 656 + BlsI GCNGC 654 653 . . 652 656 + BisI GCNGC 653 654 . . 654 657 + CviJI RGCY 655 655 . . 654 659 + NlaIV GGNNCC 656 656 . . 652 655 - AciI CCGC 652 654 . . 657 662 + Hpy178III* TCNNGA 658 660 . . 659 664 + Eco57MI CTGRAG 680 678 . . 659 664 + Eco57I CTGAAG 680 678 . . 669 674 + NspBII* CMGCKG 671 671 . . 671 674 - AciI CCGC 671 673 . . 677 680 + SetI ASST 680 676 . . 677 680 + CviJI RGCY 678 678 . . 677 680 + AluI AGCT 678 678 . . 681 684 + Csp6I GTAC 681 683 . . 681 684 + RsaI GTAC 682 682 . . 685 690 + Cac8I GCNNGC 687 687 . . 688 691 + CviJI RGCY 689 689 . . 688 691 + HaeIII GGCC 689 689 . . 688 692 + BmgT120I GGNCC 689 690 . . 688 692 + AsuI* GGNCC 688 691 . . 690 700 + BsiYI* CCNNNNNNNGG 696 693 . . 697 702 + Hpy166II GTNNAC 699 699 . . 700 710 + Hin4I GAYNNNNNVTC 691 686 723 718 700 710 + Eam1105I GACNNNNNGTC 705 704 . . 701 704 + TaiI ACGT 704 700 . . 701 704 + SetI ASST 704 700 . . 701 704 + MaeII ACGT 701 703 . . 701 706 + AflIII ACRYGT 701 705 . . 700 705 - BtrI CACGTC 702 702 . . 700 710 - Hin4I GAYNNNNNVTC 723 718 691 686 710 713 + FatI CATG 709 713 . . 710 713 + NlaIII CATG 713 709 . . 710 713 + CviAII CATG 710 712 . . 742 746 + Hpy99I CGWCG 746 741 . . 746 751 + Hpy166II GTNNAC 748 748 . . 746 751 + AccI GTMKAC 747 749 . . 750 754 + Tsp4CI* ACNGT 752 751 . . 761 765 + TspDTI ATGAA 776 774 . . 767 771 + SfaNI GCATC 776 780 . . 767 778 + AlfI GCANNNNNNTGC 756 754 790 788 768 777 + MslI CAYNNNNRTG 772 772 . . 768 772 - FokI GGATG 754 758 . . 768 772 - BseGI GGATG 767 765 . . 773 779 + TspRI CASTGNN 779 770 . . 772 776 - BsrI ACTGG 772 770 . . 771 776 - BfiI ACTGGG 766 765 . . 767 778 - AlfI GCANNNNNNTGC 790 788 756 754 782 787 + Hpy178III* TCNNGA 783 785 . . 797 801 + Tsp4CI* ACNGT 799 798 . . 802 807 + Hpy166II GTNNAC 804 804 . . 808 811 + SetI ASST 811 807 . . 817 822 + ApoI RAATTY 817 821 . . 818 821 + TspEI AATT 817 821 . . 828 834 + PfoI TCCNGGA 828 833 . . 829 833 + BssKI CCNGG 828 833 . . 829 833 + BseBI CCWGG 830 831 . . 829 833 + ScrFI CCNGG 830 831 . . 829 833 + EcoRII CCWGG 828 833 . . 830 835 + Eco57MI CTGRAG 851 849 . . 830 835 + GsuI CTGGAG 851 849 . . 834 837 + SetI ASST 837 833 . . 834 837 + CviJI RGCY 835 835 . . 834 837 + AluI AGCT 835 835 . . 835 839 + BlsI GCNGC 837 836 . . 835 839 + BisI GCNGC 836 837 . . 835 839 + TseI GCWGC 835 838 . . 835 839 - BbvI GCAGC 822 826 . . 836 841 - EcoP15I CAGCAG 808 810 . . 842 845 + CviJI RGCY 843 843 . . 838 843 - GsaI CCCAGC 842 838 . . 838 843 - BseYI CCCAGC 838 842 . . 859 862 + MseI TTAA 859 861 . . 866 869 + MseI TTAA 866 868 . . 891 896 + Hpy178III* TCNNGA 892 894 . . 891 896 + BspHI TCATGA 891 895 . . 892 895 + FatI CATG 891 895 . . 892 895 + NlaIII CATG 895 891 . . 892 895 + CviAII CATG 892 894 . . 887 892 - BsmI GAATGC 887 885 . . 893 897 + TspDTI ATGAA 908 906 . . 890 894 - TspDTI ATGAA 880 878 . . 897 900 + TspEI AATT 896 900 . . 902 905 + CviRI* TGCA 903 903 . . 922 927 + Hpy166II GTNNAC 924 924 . . 922 927 + HindII GTYRAC 924 924 . . 926 929 + SetI ASST 929 925 . . 926 931 + BspMI ACCTGC 935 939 . . 946 957 - CspCI CAANNNNNGTGG 970 968 935 933 964 969 + TaqII CACCCA 980 978 . . 970 974 + MboII GAAGA 982 981 . . 973 977 + MboII GAAGA 985 984 . . 973 978 - Ksp632I* CTCTTC 968 971 . . 980 984 + TspDTI ATGAA 995 993 . . 991 995 + HinfI GANTC 991 994 . . 991 995 - PleI GAGTC 985 986 . . 991 995 - MlyI GAGTC 985 985 . . 1002 1006 + FokI GGATG 1015 1019 . . 1002 1006 + BseGI GGATG 1008 1006 . . 1007 1011 + BlsI GCNGC 1009 1008 . . 1007 1011 + BisI GCNGC 1008 1009 . . 1003 1007 - BccI CCATC 997 998 . . 1007 1011 + BbvI GCAGC 1019 1023 . . 1007 1011 + TseI GCWGC 1007 1010 . . 1008 1013 + EcoP15I CAGCAG 1038 1040 . . 1010 1014 + BlsI GCNGC 1012 1011 . . 1010 1014 + BisI GCNGC 1011 1012 . . 1010 1014 + BbvI GCAGC 1022 1026 . . 1010 1014 + TseI GCWGC 1010 1013 . . 1012 1015 + CviJI RGCY 1013 1013 . . 1025 1029 + TspDTI ATGAA 1040 1038 . . 1029 1032 + TspEI AATT 1028 1032 . . 1036 1047 + DrdI GACNNNNNNGTC 1042 1040 . . 1040 1043 + SetI ASST 1043 1039 . . 1048 1053 + SspI AATATT 1050 1050 . . 1060 1063 + TaqI TCGA 1060 1062 . . 1064 1069 + DsaI* CCRYGG 1064 1068 . . 1064 1069 + StyI CCWWGG 1064 1068 . . 1064 1069 + NcoI CCATGG 1064 1068 . . 1064 1069 + SecI* CCNNGG 1064 1068 . . 1065 1068 + FatI CATG 1064 1068 . . 1065 1068 + NlaIII CATG 1068 1064 . . 1065 1068 + CviAII CATG 1065 1067 . . 1070 1074 + MaeIII GTNAC 1069 1074 . . 1093 1097 + PleI GAGTC 1101 1102 . . 1093 1097 + MlyI GAGTC 1102 1102 . . 1093 1097 + HinfI GANTC 1093 1096 . . 1098 1102 + DdeI CTNAG 1098 1101 . . 1102 1106 + TfiI GAWTC 1102 1105 . . 1102 1106 + HinfI GANTC 1102 1105 . . 1108 1112 + Hpy188I TCNGA 1110 1109 . . 1111 1115 + MboII GAAGA 1123 1122 . . 1111 1116 + BbvII* GAAGAC 1118 1122 . . 1122 1125 + CviRI* TGCA 1123 1123 . . 1123 1128 - BsmI GAATGC 1123 1121 . . 1134 1137 + TspEI AATT 1133 1137 . . 1139 1143 + BslFI GGGAC 1153 1157 . . 1141 1145 + HgaI GACGC 1150 1155 . . 1142 1147 + MluI ACGCGT 1142 1146 . . 1142 1147 + AflIII ACRYGT 1142 1146 . . 1143 1146 + FnuDII* CGCG 1144 1144 . . 1146 1149 + Csp6I GTAC 1146 1148 . . 1146 1149 + RsaI GTAC 1147 1147 . . 1148 1153 + BspLU11I* ACATGT 1148 1152 . . 1148 1153 + NspI RCATGY 1152 1148 . . 1148 1153 + AflIII ACRYGT 1148 1152 . . 1149 1152 + FatI CATG 1148 1152 . . 1149 1152 + NlaIII CATG 1152 1148 . . 1149 1152 + CviAII CATG 1149 1151 . . 1157 1160 + MseI TTAA 1157 1159 . . 1162 1172 - Hin4I GAYNNNNNVTC 1185 1180 1153 1148 1175 1180 + BclI TGATCA 1175 1179 . . 1176 1179 + DpnI GATC 1177 1177 . . 1176 1179 + BstKTI GATC 1178 1176 . . 1176 1179 + MboI GATC 1175 1179 . . 1186 1190 + TspDTI ATGAA 1201 1199 . . 1188 1192 - Hin4II* CCTTC 1182 1181 . . 1206 1212 + TspRI CASTGNN 1212 1203 . . 1202 1206 - HgaI GACGC 1191 1196 . . 1211 1215 + TspDTI ATGAA 1226 1224 . . 1215 1219 + BsrI ACTGG 1220 1218 . . 1222 1225 + SetI ASST 1225 1221 . . 1218 1223 - BciVI GTATCC 1212 1211 . . 1230 1234 - BslFI GGGAC 1215 1219 . . 1236 1240 + Tsp45I GTSAC 1235 1240 . . 1236 1240 + MaeIII GTNAC 1235 1240 . . 1233 1237 - BsrI ACTGG 1233 1231 . . 1232 1237 - BfiI ACTGGG 1227 1226 . . 1239 1242 + SetI ASST 1242 1238 . . 1240 1243 + MnlI CCTC 1250 1249 . . 1237 1241 - HphI GGTGA 1229 1228 . . 1242 1247 + MmeI TCCRAC 1267 1265 . . 1269 1273 + BccI CCATC 1277 1278 . . 1278 1282 + PleI GAGTC 1286 1287 . . 1278 1282 + MlyI GAGTC 1287 1287 . . 1278 1282 + HinfI GANTC 1278 1281 . . 1288 1291 + DpnI GATC 1289 1289 . . 1288 1291 + BstKTI GATC 1290 1288 . . 1288 1291 + MboI GATC 1287 1291 . . 1290 1295 + Hpy178III* TCNNGA 1291 1293 . . 1290 1295 + BspHI TCATGA 1290 1294 . . 1291 1294 + FatI CATG 1290 1294 . . 1291 1294 + NlaIII CATG 1294 1290 . . 1291 1294 + CviAII CATG 1291 1293 . . 1292 1296 + TspDTI ATGAA 1307 1305 . . 1319 1323 + FokI GGATG 1332 1336 . . 1319 1323 + BseGI GGATG 1325 1323 . . 1316 1320 - Hin4II* CCTTC 1310 1309 . . 1320 1324 - BccI CCATC 1314 1315 . . 1319 1330 - TstI CACNNNNNNTCC 1343 1338 1311 1306 1353 1357 - HphI GGTGA 1345 1344 . . 1364 1368 + Hin4II* CCTTC 1374 1373 . . 1360 1364 - HphI GGTGA 1352 1351 . . 1368 1371 + FatI CATG 1367 1371 . . 1368 1371 + NlaIII CATG 1371 1367 . . 1368 1371 + CviAII CATG 1368 1370 . . 1366 1370 - TspDTI ATGAA 1356 1354 . . 1371 1375 + BinI* GGATC 1379 1380 . . 1372 1375 + DpnI GATC 1373 1373 . . 1372 1375 + BstKTI GATC 1374 1372 . . 1372 1375 + MboI GATC 1371 1375 . . 1384 1388 + MboII GAAGA 1396 1395 . . 1387 1391 + MboII GAAGA 1399 1398 . . 1387 1392 + BbvII* GAAGAC 1394 1398 . . 1390 1394 + HinfI GANTC 1390 1393 . . 1390 1394 - PleI GAGTC 1384 1385 . . 1390 1394 - MlyI GAGTC 1384 1384 . . 1394 1399 + SfeI* CTRYAG 1394 1398 . . 1396 1400 + Tsp4CI* ACNGT 1398 1397 . . 1422 1425 + SetI ASST 1425 1421 . . 1423 1426 + MnlI CCTC 1433 1432 . . 1424 1428 + DdeI CTNAG 1424 1427 . . 1424 1428 + BspCNI CTCAG 1437 1435 . . 1424 1428 + BseMII CTCAG 1438 1436 . . 1425 1429 + Hpy188I TCNGA 1427 1426 . . 1427 1432 + XhoII RGATCY 1427 1431 . . 1428 1431 + DpnI GATC 1429 1429 . . 1428 1431 + BstKTI GATC 1430 1428 . . 1428 1431 + MboI GATC 1427 1431 . . 1428 1432 - BinI* GGATC 1422 1423 . . 1437 1440 + SetI ASST 1440 1436 . . 1437 1440 + CviJI RGCY 1438 1438 . . 1437 1440 + AluI AGCT 1438 1438 . . 1455 1458 + SetI ASST 1458 1454 . . 1461 1466 + Cac8I GCNNGC 1463 1463 . . 1450 1461 - BcgI CGANNNNNNTGC 1473 1471 1439 1437 1463 1468 + PvuII CAGCTG 1465 1465 . . 1463 1468 + NspBII* CMGCKG 1465 1465 . . 1464 1467 + SetI ASST 1467 1463 . . 1464 1467 + CviJI RGCY 1465 1465 . . 1464 1467 + AluI AGCT 1465 1465 . . 1465 1469 + BlsI GCNGC 1467 1466 . . 1465 1469 + BisI GCNGC 1466 1467 . . 1465 1469 + TseI GCWGC 1465 1468 . . 1469 1472 + MnlI CCTC 1479 1478 . . 1465 1469 - BbvI GCAGC 1452 1456 . . 1483 1486 + MnlI CCTC 1493 1492 . . 1481 1486 - BseRI GAGGAG 1472 1470 . . 1489 1493 + MaeIII GTNAC 1488 1493 . . 1511 1515 - BccI CCATC 1505 1506 . . 1523 1528 + Hpy166II GTNNAC 1525 1525 . . 1523 1528 + BssNAI GTATAC 1525 1525 . . 1523 1528 + AccI GTMKAC 1524 1526 . . 1529 1532 + DpnI GATC 1530 1530 . . 1529 1532 + BstKTI GATC 1531 1529 . . 1529 1532 + MboI GATC 1528 1532 . . 1550 1553 + TaiI ACGT 1553 1549 . . 1550 1553 + SetI ASST 1553 1549 . . 1550 1553 + MaeII ACGT 1550 1552 . . 1558 1562 + HphI GGTGA 1570 1569 . . 1556 1561 - TaqII CACCCA 1546 1544 . . 1562 1567 + ApoI RAATTY 1562 1566 . . 1563 1566 + TspEI AATT 1562 1566 . . 1578 1582 + MboII GAAGA 1590 1589 . . 1581 1586 + ApoI RAATTY 1581 1585 . . 1582 1585 + TspEI AATT 1581 1585 . . 1588 1593 + NlaIV GGNNCC 1590 1590 . . 1588 1593 + HgiCI* GGYRCC 1588 1592 . . 1586 1591 - TaqII CACCCA 1576 1574 . . 1591 1601 + MwoI GCNNNNNNNGC 1597 1594 . . 1591 1601 + BglI GCCNNNNNGGC 1597 1594 . . 1598 1602 + BmgT120I GGNCC 1599 1600 . . 1598 1602 + AsuI* GGNCC 1598 1601 . . 1599 1602 + CviJI RGCY 1600 1600 . . 1599 1602 + HaeIII GGCC 1600 1600 . . 1604 1607 + CviJI RGCY 1605 1605 . . 1606 1610 + BccI CCATC 1614 1615 . . 1609 1613 + Hpy188I TCNGA 1611 1610 . . 1610 1615 + Eco57MI CTGRAG 1631 1629 . . 1610 1615 + Eco57I CTGAAG 1631 1629 . . 1612 1616 + MboII GAAGA 1624 1623 . . 1612 1617 - Ksp632I* CTCTTC 1607 1610 . . 1615 1618 - MnlI CCTC 1608 1607 . . 1634 1637 + TspEI AATT 1633 1637 . . 1636 1639 + MseI TTAA 1636 1638 . . 1639 1642 + SetI ASST 1642 1638 . . 1676 1680 + TspDTI ATGAA 1691 1689 . . 1686 1689 + SetI ASST 1689 1685 . . 1693 1696 + MseI TTAA 1693 1695 . . 1696 1700 + TspDTI ATGAA 1711 1709 . . 1707 1710 + TspEI AATT 1706 1710 . . 1712 1715 + TspEI AATT 1711 1715 . . 1722 1725 + TspEI AATT 1721 1725 . . 1730 1744 + XcmI CCANNNNNNNNNTGG 1737 1736 . . 1735 1738 + TspEI AATT 1734 1738 . . 1753 1758 + ApoI RAATTY 1753 1757 . . 1754 1757 + TspEI AATT 1753 1757 . . 1760 1764 + BceAI ACGGC 1776 1778 . . 1762 1765 + CviJI RGCY 1763 1763 . . 1763 1768 - GsaI CCCAGC 1767 1763 . . 1763 1768 - BseYI CCCAGC 1763 1767 . . 1792 1796 + Tsp4CI* ACNGT 1794 1793 . . 1786 1796 - BaeI ACNNNNGTAYC 1811 1806 1778 1773 1801 1806 + SspI AATATT 1803 1803 . . 1807 1811 + Hpy188I TCNGA 1809 1808 . . 1808 1813 + Eco57MI CTGRAG 1829 1827 . . 1808 1813 + Eco57I CTGAAG 1829 1827 . . 1810 1814 + MboII GAAGA 1822 1821 . . 1814 1818 + TspDTI ATGAA 1829 1827 . . 1822 1827 + TatI WGTACW 1822 1826 . . 1822 1827 + ScaI AGTACT 1824 1824 . . 1823 1826 + Csp6I GTAC 1823 1825 . . 1823 1826 + RsaI GTAC 1824 1824 . . 1833 1836 + CviJI RGCY 1834 1834 . . 1852 1855 + MseI TTAA 1852 1854 . . 1866 1869 + TspEI AATT 1865 1869 . . 1874 1877 + TspEI AATT 1873 1877 . . 1878 1881 + CviJI RGCY 1879 1879 . . 1882 1887 + Hpy166II GTNNAC 1884 1884 . . 1882 1887 + HpaI GTTAAC 1884 1884 . . 1882 1887 + HindII GTYRAC 1884 1884 . . 1883 1886 + MseI TTAA 1883 1885 . . 1879 1883 - BceAI ACGGC 1864 1866 . . 1886 1890 + Tsp4CI* ACNGT 1888 1887 . . 1896 1901 + MfeI CAATTG 1896 1900 . . 1897 1900 + TspEI AATT 1896 1900 . . #--------------------------------------- # # # AarI: # [CACCTGC] # 39 1863 # # AccI: # [GTMKAC] # 378 747 777 # # AciI: # [CCGC] # 19 41 98 513 1231 # # AflII: # [CTTAAG] # 327 1575 # # AflIII: # [ACRYGT] # 6 441 701 754 # # AlfI: # [GCANNNNNNTGC] # 0 0 34 756 1112 # # AluI: # [AGCT] # 27 157 437 603 678 # # AlwNI: # [CAGNNNCTG] # 31 1871 # # ApaLI: # [GTGCAC] # 146 1756 # # ApoI: # [RAATTY] # 19 42 149 172 745 775 # # AsuI*: # [GGNCC] # 40 191 304 457 910 # # AvaII: # [GGWCC] # 191 1711 # # BaeI: # [ACNNNNGTAYC] # 33 91 1778 # # BbvI: # [GCAGC] # 3 197 430 450 822 # # BbvII*: # [GAAGAC] # 276 508 1118 # # BccI: # [CCATC] # 9 12 37 44 71 109 # 191 280 288 393 468 # # BceAI: # [ACGGC] # 38 88 475 1301 # # BcgI: # [CGANNNNNNTGC] # 34 429 1439 # # BciVI: # [GTATCC] # 690 1212 # # BclI: # [TGATCA] # 727 1175 # # BfiI: # [ACTGGG] # 461 675 766 # # BglI: # [GCCNNNNNGGC] # 305 1597 # # BglII: # [AGATCT] # 528 1374 # # BinI*: # [GGATC] # 43 480 1379 # # BisI: # [GCNGC] # 3 172 183 436 455 653 # # BlsI: # [GCNGC] # 3 172 183 435 455 654 # # BmgT120I: # [GGNCC] # 40 192 303 457 910 # # Bpu10I: # [CCTNAGC] # 135 1767 # # BsaBI: # [GATNNNNATC] # 560 1342 # # BseBI: # [CCWGG] # 830 1072 # # BseGI: # [GGATG] # 147 241 317 577 620 # # BseMII: # [CTCAG] # 310 464 1128 # # BseRI: # [GAGGAG] # 430 1472 # # BseSI: # [GKGCMC] # 150 1752 # # BseYI: # [CCCAGC] # 139 180 658 925 # # BsiYI*: # [CCNNNNNNNGG] # 696 1206 # # BslFI: # [GGGAC] # 62 687 1153 # # BsmAI: # [GTCTC] # 116 315 1471 # # BsmI: # [GAATGC] # 236 779 887 # # BspCNI: # [CTCAG] # 311 465 1126 # # BspHI: # [TCATGA] # 289 399 602 612 # # BspLU11I*: # [ACATGT] # 754 1148 # # BspMI: # [ACCTGC] # 39 896 967 # # BsrI: # [ACTGG] # 13 448 669 772 # # BssKI: # [CCNGG] # 403 425 1074 # # BssNAI: # [GTATAC] # 377 1525 # # BstKTI: # [GATC] # 49 56 84 101 112 371 # 482 647 # # BtrI: # [CACGTC] # 702 1200 # # Cac8I: # [GCNNGC] # 236 439 451 776 # # CauII*: # [CCSGG] # 405 1497 # # Csp6I: # [GTAC] # 79 99 183 399 465 677 # # CspCI: # [CAANNNNNGTGG] # 35 932 935 # # CviAII: # [CATG] # 77 84 94 107 142 173 # 182 509 534 # # CviJI: # [RGCY] # 5 8 11 23 23 27 # 45 50 71 118 135 146 # 158 170 183 304 425 # # CviRI*: # [TGCA] # 40 108 140 220 615 779 # # DdeI: # [CTNAG] # 135 184 326 478 779 # # DpnI: # [GATC] # 49 56 84 101 112 372 # 481 647 # # DraII: # [RGGNCCY] # 191 1711 # # DrdI: # [GACNNNNNNGTC] # 860 1042 # # DsaI*: # [CCRYGG] # 838 1064 # # Eam1105I: # [GACNNNNNGTC] # 705 1197 # # EciI: # [GGCGGA] # 113 1789 # # Eco57I: # [CTGAAG] # 73 127 198 553 951 # # Eco57MI: # [CTGRAG] # 73 127 171 198 553 780 # # EcoP15I: # [CAGCAG] # 230 303 505 864 # # EcoRII: # [CCWGG] # 828 1074 # # FalI: # [AAGNNNNNCTT] # 0 0 32 118 1752 # # FatI: # [CATG] # 77 84 93 107 142 173 # 182 509 535 # # FnuDII*: # [CGCG] # 758 1144 # # FokI: # [GGATG] # 154 261 317 570 600 # # GsaI: # [CCCAGC] # 135 184 658 925 # # GsuI: # [CTGGAG] # 851 1051 # # HaeIII: # [GGCC] # 233 302 456 911 # # HgaI: # [GACGC] # 41 120 711 1030 # # HgiAI*: # [GWGCWC] # 150 1752 # # HgiCI*: # [GGYRCC] # 314 1588 # # Hin4I: # [GAYNNNNNVTC] # 0 0 32 32 430 691 # 717 # # Hin4II*: # [CCTTC] # 64 128 258 528 924 # # HindII: # [GTYRAC] # 18 924 960 # # HinfI: # [GANTC] # 9 102 112 176 323 512 # 668 # # HpaI: # [GTTAAC] # 18 1884 # # HpaII: # [CCGG] # 404 1498 # # HphI: # [GGTGA] # 7 9 58 116 218 332 # 1162 # # Hpy166II: # [GTNNAC] # 18 49 56 120 148 359 # 551 601 # # Hpy178III*: # [TCNNGA] # 55 109 125 156 399 447 # 611 # # Hpy188I: # [TCNGA] # 33 93 99 114 184 198 # 317 320 544 # # Hpy99I: # [CGWCG] # 114 250 382 1156 # # Ksp632I*: # [CTCTTC] # 295 639 968 # # MaeI: # [CTAG] # 47 506 1349 # # MaeII: # [ACGT] # 352 701 849 # # MaeIII: # [GTNAC] # 7 166 253 414 1062 # # MboI: # [GATC] # 49 56 84 101 112 374 # 479 647 # # MboII: # [GAAGA] # 3 3 34 80 138 191 # 198 273 476 506 # # MfeI: # [CAATTG] # 6 1896 # # MluI: # [ACGCGT] # 760 1142 # # MlyI: # [GAGTC] # 97 117 185 317 518 668 # # MmeI: # [TCCRAC] # 635 1267 # # MnlI: # [CCTC] # 14 46 115 180 183 270 # 294 800 # # MseI: # [TTAA] # 7 19 31 51 57 71 # 159 206 237 291 294 479 # # MslI: # [CAYNNNNRTG] # 92 206 474 1130 # # MwoI: # [GCNNNNNNNGC] # 145 305 1452 # # NcoI: # [CCATGG] # 838 1064 # # NlaIII: # [CATG] # 77 84 97 107 142 173 # 182 509 531 # # NlaIV: # [GGNNCC] # 192 312 464 934 # # NspBII*: # [CMGCKG] # 437 671 794 # # NspI: # [RCATGY] # 750 1152 # # PfoI: # [TCCNGGA] # 828 1074 # # PleI: # [GAGTC] # 98 116 185 317 518 668 # # PpuMI: # [RGGWCCY] # 191 1711 # # PvuII: # [CAGCTG] # 437 1465 # # RsaI: # [GTAC] # 78 99 183 400 465 677 # # ScaI: # [AGTACT] # 78 499 1325 # # ScrFI: # [CCNGG] # 405 425 1072 # # SduI: # [GDGCHC] # 150 1752 # # SecI*: # [CCNNGG] # 838 1064 # # SetI: # [ASST] # 9 15 17 18 24 26 # 33 47 86 89 92 107 # 114 182 183 213 236 411 # # SfaNI: # [GCATC] # 206 570 1126 # # SfeI*: # [CTRYAG] # 508 1394 # # SmlI: # [CTYRAG] # 327 1575 # # SspI: # [AATATT] # 99 753 1050 # # StyI: # [CCWWGG] # 838 1064 # # TaiI: # [ACGT] # 349 704 849 # # TaqI: # [TCGA] # 109 385 566 842 # # TaqII: # [CACCCA] # 30 326 566 980 # # TatI: # [WGTACW] # 80 497 1325 # # TauI: # [GCSGC] # 655 1247 # # TfiI: # [GAWTC] # 800 1102 # # TseI: # [GCWGC] # 3 172 437 455 835 # # TsoI: # [TARCCA] # 64 315 1523 # # Tsp45I: # [GTSAC] # 667 1235 # # Tsp4CI*: # [ACNGT] # 14 47 91 94 262 396 # 399 599 # # TspDTI: # [ATGAA] # 20 25 28 45 49 73 # 81 87 104 118 161 335 # 384 392 # # TspEI: # [AATT] # 5 6 8 10 13 19 # 19 23 30 42 52 73 # 79 88 100 103 105 112 # 116 132 166 172 429 # # TspRI: # [CASTGNN] # 287 433 492 690 # # TstI: # [CACNNNNNNTCC] # 32 559 1311 # # VspI: # [ATTAAT] # 257 1645 # # XcmI: # [CCANNNNNNNNNTGG] # 91 165 1646 # # XhoII: # [RGATCY] # 475 528 899 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 1902 # Reported_sequences: 1 # Reported_hitcount: 442 #---------------------------------------