Restriction Fragments for YBLWdelta9



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

YBLWdelta9 on chromosome II from coordinates 221037 to 221370.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.5785.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 65 69 + Tsp4CI* ACNGT 67 66 . . 71 74 + MseI TTAA 71 73 . . 97 100 + SetI ASST 100 96 . . 97 100 + CviJI RGCY 98 98 . . 97 100 + AluI AGCT 98 98 . . 93 103 - Hin4I GAYNNNNNVTC 116 111 84 79 105 108 + TaqI TCGA 105 107 . . 114 117 - MnlI CCTC 107 106 . . 119 122 + SetI ASST 122 118 . . 119 122 + CviJI RGCY 120 120 . . 119 122 + AluI AGCT 120 120 . . 121 126 + Eco57MI CTGRAG 142 140 . . 121 126 + Eco57I CTGAAG 142 140 . . 127 130 + CviRI* TGCA 128 128 . . 154 158 + TspDTI ATGAA 169 167 . . 168 172 + TspGWI ACGGA 183 181 . . 175 178 - MnlI CCTC 168 167 . . 175 185 - Hin4I GAYNNNNNVTC 198 193 166 161 188 193 + SspI AATATT 190 190 . . 210 214 + TfiI GAWTC 210 213 . . 210 214 + HinfI GANTC 210 213 . . 214 224 + BsiYI* CCNNNNNNNGG 220 217 . . 224 228 + TfiI GAWTC 224 227 . . 221 224 - MnlI CCTC 214 213 . . 224 228 + HinfI GANTC 224 227 . . 236 241 + SmlI CTYRAG 236 240 . . 236 241 + Bce83I* CTTGAG 257 255 . . 239 244 + BseRI GAGGAG 254 252 . . 239 242 - MnlI CCTC 232 231 . . 250 253 + MaeI CTAG 250 252 . . 264 269 + Hpy166II GTNNAC 266 266 . . 264 269 + BssNAI GTATAC 266 266 . . 264 269 + AccI GTMKAC 265 267 . . 268 271 + SetI ASST 271 267 . . 272 277 + SspI AATATT 274 274 . . 280 283 + CviJI RGCY 281 281 . . 297 301 + TfiI GAWTC 297 300 . . 297 301 + HinfI GANTC 297 300 . . 307 310 + TspEI AATT 306 310 . . #--------------------------------------- # # # AccI: # [GTMKAC] # 69 265 # # AluI: # [AGCT] # 22 98 214 # # Bce83I*: # [CTTGAG] # 77 257 # # BseRI: # [GAGGAG] # 80 254 # # BsiYI*: # [CCNNNNNNNGG] # 114 220 # # BssNAI: # [GTATAC] # 68 266 # # CviJI: # [RGCY] # 22 53 98 161 # # CviRI*: # [TGCA] # 128 206 # # Eco57I: # [CTGAAG] # 142 192 # # Eco57MI: # [CTGRAG] # 142 192 # # Hin4I: # [GAYNNNNNVTC] # 32 32 50 84 136 # # HinfI: # [GANTC] # 14 37 73 210 # # Hpy166II: # [GTNNAC] # 68 266 # # MaeI: # [CTAG] # 84 250 # # MnlI: # [CCTC] # 18 46 61 102 107 # # MseI: # [TTAA] # 71 263 # # SetI: # [ASST] # 22 63 100 149 # # SmlI: # [CTYRAG] # 98 236 # # SspI: # [AATATT] # 60 84 190 # # TaqI: # [TCGA] # 105 229 # # TfiI: # [GAWTC] # 14 37 73 210 # # Tsp4CI*: # [ACNGT] # 67 267 # # TspDTI: # [ATGAA] # 165 169 # # TspEI: # [AATT] # 28 306 # # TspGWI: # [ACGGA] # 151 183 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 334 # Reported_sequences: 1 # Reported_hitcount: 39 #---------------------------------------