Restriction Fragments for TEL10R



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

TEL10R on chromosome X from coordinates 744902 to 745751.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.18299.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 25 29 + MboII GAAGA 37 36 . . 34 39 + SspI AATATT 36 36 . . 49 52 + SetI ASST 52 48 . . 50 54 + HphI GGTGA 62 61 . . 62 66 + HphI GGTGA 74 73 . . 76 81 + SspI AATATT 78 78 . . 98 101 + TspEI AATT 97 101 . . 105 110 - TsoI TARCCA 95 93 . . 111 116 + Hpy166II GTNNAC 113 113 . . 111 116 + BssNAI GTATAC 113 113 . . 111 116 + AccI GTMKAC 112 114 . . 115 119 + Tsp4CI* ACNGT 117 116 . . 134 137 + TaiI ACGT 137 133 . . 134 137 + SetI ASST 137 133 . . 134 137 + MaeII ACGT 134 136 . . 143 146 + MseI TTAA 143 145 . . 159 164 + SspI AATATT 161 161 . . 166 171 + NlaIV GGNNCC 168 168 . . 167 171 + BmgT120I GGNCC 168 169 . . 167 171 + AsuI* GGNCC 167 170 . . 168 171 + CviJI RGCY 169 169 . . 168 171 + HaeIII GGCC 169 169 . . 169 173 + TauI GCSGC 172 169 . . 169 173 + BlsI GCNGC 171 170 . . 169 173 + BisI GCNGC 170 171 . . 170 173 + AciI CCGC 170 172 . . 191 194 + MseI TTAA 191 193 . . 242 247 + NspBII* CMGCKG 244 244 . . 242 245 + AciI CCGC 242 244 . . 245 249 + DdeI CTNAG 245 248 . . 245 249 - BspCNI CTCAG 237 235 . . 245 249 - BseMII CTCAG 236 234 . . 247 250 - MnlI CCTC 240 239 . . 244 250 - Bpu10I CCTNAGC 245 248 . . 244 250 - BbvCI CCTCAGC 245 248 . . 260 263 + CviRI* TGCA 261 261 . . 256 260 - BceAI ACGGC 241 243 . . 261 272 + AlfI GCANNNNNNTGC 250 248 284 282 262 271 + MslI CAYNNNNRTG 266 266 . . 268 272 - SfaNI GCATC 258 262 . . 261 272 - AlfI GCANNNNNNTGC 284 282 250 248 276 279 + CviRI* TGCA 277 277 . . 284 287 + Csp6I GTAC 284 286 . . 284 287 + RsaI GTAC 285 285 . . 292 296 + HphI GGTGA 304 303 . . 289 293 - BccI CCATC 283 284 . . 299 303 - BccI CCATC 293 294 . . 303 307 + HphI GGTGA 315 314 . . 301 306 - TaqII CACCCA 291 289 . . 306 310 - BccI CCATC 300 301 . . 351 355 + Tsp4CI* ACNGT 353 352 . . 352 357 + SfeI* CTRYAG 352 356 . . 357 361 + SfaNI GCATC 366 370 . . 357 368 + AlfI GCANNNNNNTGC 346 344 380 378 358 367 + MslI CAYNNNNRTG 362 362 . . 358 362 - FokI GGATG 344 348 . . 358 362 - BseGI GGATG 357 355 . . 360 364 - TspGWI ACGGA 350 348 . . 366 369 + CviRI* TGCA 367 367 . . 368 373 + NdeI CATATG 369 371 . . 357 368 - AlfI GCANNNNNNTGC 380 378 346 344 382 387 + Hpy166II GTNNAC 384 384 . . 382 387 + BssNAI GTATAC 384 384 . . 382 387 + AccI GTMKAC 383 385 . . 391 394 + CviRI* TGCA 392 392 . . 405 410 + NspI RCATGY 409 405 . . 406 409 + FatI CATG 405 409 . . 406 409 + NlaIII CATG 409 405 . . 406 409 + CviAII CATG 406 408 . . 465 470 + Hpy166II GTNNAC 467 467 . . 465 470 + HpaI GTTAAC 467 467 . . 465 470 + HindII GTYRAC 467 467 . . 466 469 + MseI TTAA 466 468 . . 468 473 + AclI AACGTT 469 471 . . 469 472 + TaiI ACGT 472 468 . . 469 472 + SetI ASST 472 468 . . 469 472 + MaeII ACGT 469 471 . . 482 485 - MnlI CCTC 475 474 . . 494 498 + Tsp4CI* ACNGT 496 495 . . 496 501 + TatI WGTACW 496 500 . . 497 500 + Csp6I GTAC 497 499 . . 497 500 + RsaI GTAC 498 498 . . 499 503 + Tsp4CI* ACNGT 501 500 . . 500 506 + TspRI CASTGNN 506 497 . . 512 515 + FatI CATG 511 515 . . 512 515 + NlaIII CATG 515 511 . . 512 515 + CviAII CATG 512 514 . . 518 522 + FokI GGATG 531 535 . . 518 522 + BseGI GGATG 524 522 . . 519 523 - BccI CCATC 513 514 . . 553 558 - MmeI TCCRAC 534 532 . . 566 569 + TspEI AATT 565 569 . . 571 574 - MnlI CCTC 564 563 . . 575 579 + MaeIII GTNAC 574 579 . . 578 582 + Tsp4CI* ACNGT 580 579 . . 587 592 + Hpy166II GTNNAC 589 589 . . 591 595 + Tsp4CI* ACNGT 593 592 . . 596 600 + FokI GGATG 609 613 . . 596 600 + BseGI GGATG 602 600 . . 597 601 - BccI CCATC 591 592 . . 621 625 + FokI GGATG 634 638 . . 621 625 + BseGI GGATG 627 625 . . 618 622 - BccI CCATC 612 613 . . 622 626 - BccI CCATC 616 617 . . 644 648 + TspDTI ATGAA 659 657 . . 651 655 + BslFI GGGAC 665 669 . . 659 663 + MaeIII GTNAC 658 663 . . 672 675 + SetI ASST 675 671 . . 671 674 - MnlI CCTC 664 663 . . 670 680 - BsaXI ACNNNNNCTCC 692 689 662 659 685 688 - MnlI CCTC 678 677 . . 689 692 + Csp6I GTAC 689 691 . . 689 692 + RsaI GTAC 690 690 . . 691 694 + TaiI ACGT 694 690 . . 691 694 + SetI ASST 694 690 . . 691 694 + MaeII ACGT 691 693 . . 694 697 + MseI TTAA 694 696 . . 684 694 - BsaXI ACNNNNNCTCC 706 703 676 673 698 702 - BsmAI GTCTC 692 696 . . 703 706 + SetI ASST 706 702 . . 715 720 - MmeI TCCRAC 696 694 . . 777 782 - TaqII CACCCA 767 765 . . 783 788 - TaqII CACCCA 773 771 . . 789 794 - TaqII CACCCA 779 777 . . 801 806 - TaqII CACCCA 791 789 . . 814 819 - TaqII CACCCA 804 802 . . 827 832 - TaqII CACCCA 817 815 . . 844 849 - TaqII CACCCA 834 832 . . #--------------------------------------- # # # AccI: # [GTMKAC] # 112 271 467 # # AciI: # [CCGC] # 72 170 608 # # AclI: # [AACGTT] # 381 469 # # AlfI: # [GCANNNNNNTGC] # 0 0 0 0 34 34 # 62 250 470 # # AsuI*: # [GGNCC] # 167 683 # # BbvCI: # [CCTCAGC] # 245 605 # # BccI: # [CCATC] # 4 7 10 21 78 213 # 234 283 # # BceAI: # [ACGGC] # 241 609 # # BisI: # [GCNGC] # 170 680 # # BlsI: # [GCNGC] # 171 679 # # BmgT120I: # [GGNCC] # 168 682 # # Bpu10I: # [CCTNAGC] # 245 605 # # BsaXI: # [ACNNNNNCTCC] # 14 14 16 144 662 # # BseGI: # [GGATG] # 25 78 167 223 357 # # BseMII: # [CTCAG] # 236 614 # # BslFI: # [GGGAC] # 185 665 # # BsmAI: # [GTCTC] # 158 692 # # BspCNI: # [CTCAG] # 237 613 # # BssNAI: # [GTATAC] # 113 271 466 # # Csp6I: # [GTAC] # 161 192 213 284 # # CviAII: # [CATG] # 106 338 406 # # CviJI: # [RGCY] # 169 681 # # CviRI*: # [TGCA] # 16 25 90 261 458 # # DdeI: # [CTNAG] # 245 605 # # FatI: # [CATG] # 106 339 405 # # FokI: # [GGATG] # 25 78 187 216 344 # # HaeIII: # [GGCC] # 169 681 # # HindII: # [GTYRAC] # 383 467 # # HpaI: # [GTTAAC] # 383 467 # # HphI: # [GGTGA] # 11 12 62 230 535 # # Hpy166II: # [GTNNAC] # 83 113 122 261 271 # # MaeII: # [ACGT] # 134 159 222 335 # # MaeIII: # [GTNAC] # 84 192 574 # # MboII: # [GAAGA] # 37 813 # # MmeI: # [TCCRAC] # 154 162 534 # # MnlI: # [CCTC] # 14 89 100 172 235 240 # # MseI: # [TTAA] # 48 143 156 228 275 # # MslI: # [CAYNNNNRTG] # 96 266 488 # # NdeI: # [CATATG] # 369 481 # # NlaIII: # [CATG] # 106 335 409 # # NlaIV: # [GGNNCC] # 168 682 # # NspBII*: # [CMGCKG] # 244 606 # # NspI: # [RCATGY] # 409 441 # # RsaI: # [GTAC] # 160 192 213 285 # # SetI: # [ASST] # 12 19 52 85 144 203 # 335 # # SfaNI: # [GCATC] # 108 258 484 # # SfeI*: # [CTRYAG] # 352 498 # # SspI: # [AATATT] # 36 42 83 689 # # TaiI: # [ACGT] # 137 156 222 335 # # TaqII: # [CACCCA] # 6 6 12 13 13 16 # 17 291 476 # # TatI: # [WGTACW] # 354 496 # # TauI: # [GCSGC] # 172 678 # # TsoI: # [TARCCA] # 95 755 # # Tsp4CI*: # [ACNGT] # 5 13 79 117 143 236 # 257 # # TspDTI: # [ATGAA] # 191 659 # # TspEI: # [AATT] # 97 285 468 # # TspGWI: # [ACGGA] # 350 500 # # TspRI: # [CASTGNN] # 344 506 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 850 # Reported_sequences: 1 # Reported_hitcount: 128 #---------------------------------------