Restriction Fragments for ARS1625



Send questions or suggestions to SGD

BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1625 on chromosome XVI from coordinates 695461 to 695574.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.30673.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 7 11 + TspDTI ATGAA 22 20 . . 9 14 + ApoI RAATTY 9 13 . . 10 13 + TspEI AATT 9 13 . . 25 30 + AsuII TTCGAA 26 28 . . 26 29 + TaqI TCGA 26 28 . . 31 34 + TspEI AATT 30 34 . . 43 48 + CfrI YGGCCR 43 47 . . 44 47 + CviJI RGCY 45 45 . . 44 47 + HaeIII GGCC 45 45 . . 57 61 + Hpy188I TCNGA 59 58 . . 60 65 + BseRI GAGGAG 75 73 . . 60 63 - MnlI CCTC 53 52 . . 64 67 + SetI ASST 67 63 . . 64 67 + CviJI RGCY 65 65 . . 64 67 + AluI AGCT 65 65 . . 79 83 - BccI CCATC 73 74 . . 87 90 + Hin6I GCGC 87 89 . . 87 90 + GlaI GCGC 88 88 . . 87 90 + HhaI GCGC 89 87 . . 91 94 + TaiI ACGT 94 90 . . 91 94 + SetI ASST 94 90 . . 91 94 + MaeII ACGT 91 93 . . 106 111 + SspI AATATT 108 108 . . #--------------------------------------- # # # AluI: # [AGCT] # 49 65 # # ApoI: # [RAATTY] # 9 105 # # AsuII: # [TTCGAA] # 26 88 # # BccI: # [CCATC] # 41 73 # # BseRI: # [GAGGAG] # 39 75 # # CfrI: # [YGGCCR] # 43 71 # # CviJI: # [RGCY] # 20 45 49 # # GlaI: # [GCGC] # 26 88 # # HaeIII: # [GGCC] # 45 69 # # HhaI: # [GCGC] # 25 89 # # Hin6I: # [GCGC] # 27 87 # # Hpy188I: # [TCNGA] # 55 59 # # MaeII: # [ACGT] # 23 91 # # MnlI: # [CCTC] # 53 61 # # SetI: # [ASST] # 20 27 67 # # SspI: # [AATATT] # 6 108 # # TaiI: # [ACGT] # 20 94 # # TaqI: # [TCGA] # 26 88 # # TspDTI: # [ATGAA] # 22 92 # # TspEI: # [AATT] # 9 21 84 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 114 # Reported_sequences: 1 # Reported_hitcount: 23 #---------------------------------------