Restriction Fragments for ARS1604



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1604 on chromosome XVI from coordinates 42977 to 43212.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.17500.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 25 29 - BsrI ACTGG 25 23 . . 46 49 + CviRI* TGCA 47 47 . . 51 54 + TspEI AATT 50 54 . . 52 57 + VspI ATTAAT 53 55 . . 53 56 + MseI TTAA 53 55 . . 55 58 + TspEI AATT 54 58 . . 64 68 + MboII GAAGA 76 75 . . 64 73 + XmnI GAANNNNTTC 68 68 . . 65 75 + FalI AAGNNNNNCTT 56 51 88 83 72 77 + Hpy178III* TCNNGA 73 75 . . 65 75 - FalI AAGNNNNNCTT 88 83 56 51 118 123 + ApoI RAATTY 118 122 . . 119 122 + TspEI AATT 118 122 . . 148 152 + Tsp4CI* ACNGT 150 149 . . 152 157 + AhaIII* TTTAAA 154 154 . . 153 156 + MseI TTAA 153 155 . . 155 160 + ApoI RAATTY 155 159 . . 156 159 + TspEI AATT 155 159 . . 201 205 - MboII GAAGA 193 192 . . 200 205 - BbvII* GAAGAC 193 197 . . 228 233 + ClaI ATCGAT 229 231 . . 229 232 + TaqI TCGA 229 231 . . 231 234 + DpnI GATC 232 232 . . 231 234 + BstKTI GATC 233 231 . . 231 234 + MboI GATC 230 234 . . #--------------------------------------- # # # AhaIII*: # [TTTAAA] # 82 154 # # ApoI: # [RAATTY] # 37 81 118 # # BbvII*: # [GAAGAC] # 43 193 # # BsrI: # [ACTGG] # 25 211 # # BstKTI: # [GATC] # 3 233 # # ClaI: # [ATCGAT] # 7 229 # # CviRI*: # [TGCA] # 47 189 # # DpnI: # [GATC] # 4 232 # # FalI: # [AAGNNNNNCTT] # 0 0 32 56 148 # # Hpy178III*: # [TCNNGA] # 73 163 # # MboI: # [GATC] # 6 230 # # MboII: # [GAAGA] # 43 76 117 # # MseI: # [TTAA] # 53 83 100 # # TaqI: # [TCGA] # 7 229 # # Tsp4CI*: # [ACNGT] # 86 150 # # TspEI: # [AATT] # 4 37 50 64 81 # # VspI: # [ATTAAT] # 53 183 # # XmnI: # [GAANNNNTTC] # 68 168 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 236 # Reported_sequences: 1 # Reported_hitcount: 25 #---------------------------------------