Restriction Fragments for ARS1524



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1524 on chromosome XV from coordinates 783345 to 783563.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.23047.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 6 9 + CviRI* TGCA 7 7 . . 8 13 - BsrDI GCAATG 7 5 . . 19 22 + MseI TTAA 19 21 . . 30 33 + CviRI* TGCA 31 31 . . 31 36 + Cac8I GCNNGC 33 33 . . 47 50 + MseI TTAA 47 49 . . 64 67 + SetI ASST 67 63 . . 64 67 + CviJI RGCY 65 65 . . 64 67 + AluI AGCT 65 65 . . 71 74 + TspEI AATT 70 74 . . 86 89 + TspEI AATT 85 89 . . 88 91 + MseI TTAA 88 90 . . 96 100 - MboII GAAGA 88 87 . . 104 108 + Hpy188I TCNGA 106 105 . . 128 137 + MslI CAYNNNNRTG 132 132 . . 128 132 - FokI GGATG 114 118 . . 128 132 - BseGI GGATG 127 125 . . 135 139 + TspDTI ATGAA 150 148 . . 140 144 + MaeIII GTNAC 139 144 . . 158 164 + TspRI CASTGNN 164 155 . . 160 164 + DdeI CTNAG 160 163 . . 160 164 - BspCNI CTCAG 152 150 . . 160 164 - BseMII CTCAG 151 149 . . 164 169 + ApoI RAATTY 164 168 . . 165 168 + TspEI AATT 164 168 . . 172 176 + MaeIII GTNAC 171 176 . . 180 194 + XcmI CCANNNNNNNNNTGG 187 186 . . 177 181 - HphI GGTGA 169 168 . . 209 212 + CviRI* TGCA 210 210 . . #--------------------------------------- # # # AluI: # [AGCT] # 65 154 # # ApoI: # [RAATTY] # 55 164 # # BseGI: # [GGATG] # 92 127 # # BseMII: # [CTCAG] # 68 151 # # BspCNI: # [CTCAG] # 67 152 # # BsrDI: # [GCAATG] # 7 212 # # Cac8I: # [GCNNGC] # 33 186 # # CviJI: # [RGCY] # 65 154 # # CviRI*: # [TGCA] # 7 9 24 179 # # DdeI: # [CTNAG] # 59 160 # # FokI: # [GGATG] # 105 114 # # HphI: # [GGTGA] # 50 169 # # Hpy188I: # [TCNGA] # 106 113 # # MaeIII: # [GTNAC] # 32 48 139 # # MboII: # [GAAGA] # 88 131 # # MseI: # [TTAA] # 19 28 41 131 # # MslI: # [CAYNNNNRTG] # 87 132 # # SetI: # [ASST] # 67 152 # # TspDTI: # [ATGAA] # 69 150 # # TspEI: # [AATT] # 15 55 70 79 # # TspRI: # [CASTGNN] # 55 164 # # XcmI: # [CCANNNNNNNNNTGG] # 32 187 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 219 # Reported_sequences: 1 # Reported_hitcount: 29 #---------------------------------------