Restriction Fragments for ARS1523



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1523 on chromosome XV from coordinates 766605 to 766788.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.32391.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 6 9 + SetI ASST 9 5 . . 9 12 + CviRI* TGCA 10 10 . . 10 14 + SfaNI GCATC 19 23 . . 29 33 + BccI CCATC 37 38 . . 45 49 + DdeI CTNAG 45 48 . . 50 54 + TfiI GAWTC 50 53 . . 50 54 + HinfI GANTC 50 53 . . 66 69 + Csp6I GTAC 66 68 . . 66 69 + RsaI GTAC 67 67 . . 68 71 + TaiI ACGT 71 67 . . 68 71 + SetI ASST 71 67 . . 68 71 + MaeII ACGT 68 70 . . 92 95 + TaiI ACGT 95 91 . . 92 95 + SetI ASST 95 91 . . 92 95 + MaeII ACGT 92 94 . . 99 103 - TspDTI ATGAA 89 87 . . 123 128 + ApoI RAATTY 123 127 . . 124 127 + TspEI AATT 123 127 . . 133 137 + Hin4II* CCTTC 143 142 . . 135 139 - TspDTI ATGAA 125 123 . . 142 145 + CviRI* TGCA 143 143 . . 144 153 + MslI CAYNNNNRTG 148 148 . . 156 161 + VspI ATTAAT 157 159 . . 157 160 + MseI TTAA 157 159 . . 161 165 + Hpy188I TCNGA 163 162 . . 177 182 + ApoI RAATTY 177 181 . . 178 181 + TspEI AATT 177 181 . . 181 184 + MseI TTAA 181 183 . . #--------------------------------------- # # # ApoI: # [RAATTY] # 7 54 123 # # BccI: # [CCATC] # 37 147 # # Csp6I: # [GTAC] # 66 118 # # CviRI*: # [TGCA] # 10 41 133 # # DdeI: # [CTNAG] # 45 139 # # Hin4II*: # [CCTTC] # 41 143 # # HinfI: # [GANTC] # 50 134 # # Hpy188I: # [TCNGA] # 21 163 # # MaeII: # [ACGT] # 24 68 92 # # MseI: # [TTAA] # 3 24 157 # # MslI: # [CAYNNNNRTG] # 36 148 # # RsaI: # [GTAC] # 67 117 # # SetI: # [ASST] # 9 24 62 89 # # SfaNI: # [GCATC] # 19 165 # # TaiI: # [ACGT] # 24 71 89 # # TfiI: # [GAWTC] # 50 134 # # TspDTI: # [ATGAA] # 36 59 89 # # TspEI: # [AATT] # 7 54 123 # # VspI: # [ATTAAT] # 27 157 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 184 # Reported_sequences: 1 # Reported_hitcount: 28 #---------------------------------------