Restriction Fragments for ARS1516/ARS1516



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1516/ARS1516 on chromosome XV from coordinates 566410 to 566643.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.30812.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 5 10 + Hpy178III* TCNNGA 6 8 . . 5 10 + BspHI TCATGA 5 9 . . 6 9 + FatI CATG 5 9 . . 6 9 + NlaIII CATG 9 5 . . 6 9 + CviAII CATG 6 8 . . 10 13 + TaiI ACGT 13 9 . . 10 13 + SetI ASST 13 9 . . 10 13 + MaeII ACGT 10 12 . . 28 31 + TspEI AATT 27 31 . . 30 33 + MseI TTAA 30 32 . . 40 43 + MseI TTAA 40 42 . . 50 56 + TspRI CASTGNN 56 47 . . 65 69 + MaeIII GTNAC 64 69 . . 71 76 + ApoI RAATTY 71 75 . . 72 75 + TspEI AATT 71 75 . . 79 82 + CviJI RGCY 80 80 . . 76 81 - NmeAIII GCCGAG 56 54 . . 90 95 + SspI AATATT 92 92 . . 95 98 + MseI TTAA 95 97 . . 105 108 + MseI TTAA 105 107 . . 107 112 + ApoI RAATTY 107 111 . . 108 111 + TspEI AATT 107 111 . . 124 128 + TfiI GAWTC 124 127 . . 124 128 + HinfI GANTC 124 127 . . 131 134 + MseI TTAA 131 133 . . 152 157 + Hpy178III* TCNNGA 153 155 . . 165 168 + TspEI AATT 164 168 . . 169 172 + AciI CCGC 169 171 . . 171 175 + SfaNI GCATC 180 184 . . 179 182 + SetI ASST 182 178 . . 184 189 + ApoI RAATTY 184 188 . . 185 188 + TspEI AATT 184 188 . . 201 206 + AhaIII* TTTAAA 203 203 . . 202 205 + MseI TTAA 202 204 . . 205 210 + ApoI RAATTY 205 209 . . 206 209 + TspEI AATT 205 209 . . 210 215 + Hpy178III* TCNNGA 211 213 . . 210 215 + BspHI TCATGA 210 214 . . 211 214 + FatI CATG 210 214 . . 211 214 + NlaIII CATG 214 210 . . 211 214 + CviAII CATG 211 213 . . 212 216 + TspDTI ATGAA 227 225 . . 209 213 - TspDTI ATGAA 199 197 . . 218 221 + MaeI CTAG 218 220 . . 229 234 + AsuII TTCGAA 230 232 . . 230 233 + TaqI TCGA 230 232 . . #--------------------------------------- # # # AciI: # [CCGC] # 65 169 # # AhaIII*: # [TTTAAA] # 31 203 # # ApoI: # [RAATTY] # 21 29 36 71 77 # # AsuII: # [TTCGAA] # 4 230 # # BspHI: # [TCATGA] # 5 24 205 # # CviAII: # [CATG] # 6 23 205 # # CviJI: # [RGCY] # 80 154 # # FatI: # [CATG] # 5 24 205 # # HinfI: # [GANTC] # 110 124 # # Hpy178III*: # [TCNNGA] # 6 23 58 147 # # MaeI: # [CTAG] # 16 218 # # MaeII: # [ACGT] # 10 224 # # MaeIII: # [GTNAC] # 64 170 # # MseI: # [TTAA] # 10 10 26 30 32 55 # 71 # # NlaIII: # [CATG] # 9 20 205 # # NmeAIII: # [GCCGAG] # 56 178 # # SetI: # [ASST] # 13 52 169 # # SfaNI: # [GCATC] # 54 180 # # SspI: # [AATATT] # 92 142 # # TaiI: # [ACGT] # 13 221 # # TaqI: # [TCGA] # 4 230 # # TfiI: # [GAWTC] # 110 124 # # TspDTI: # [ATGAA] # 7 28 199 # # TspEI: # [AATT] # 20 21 27 29 36 44 # 57 # # TspRI: # [CASTGNN] # 56 178 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 234 # Reported_sequences: 1 # Reported_hitcount: 46 #---------------------------------------