Restriction Fragments for ARS1502



Send questions or suggestions to SGD

BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1502 on chromosome XV from coordinates 600886 to 600960.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.2767.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 7 12 + ApoI RAATTY 7 11 . . 8 11 + TspEI AATT 7 11 . . 19 30 + BdaI TGANNNNNNTCA 8 6 42 40 20 25 + ApoI RAATTY 20 24 . . 21 24 + TspEI AATT 20 24 . . 24 28 - TspDTI ATGAA 14 12 . . 29 34 + MfeI CAATTG 29 33 . . 30 33 + TspEI AATT 29 33 . . 19 30 - BdaI TGANNNNNNTCA 42 40 8 6 34 38 + HphI GGTGA 46 45 . . 35 39 + Tsp45I GTSAC 34 39 . . 35 39 + MaeIII GTNAC 34 39 . . 55 58 + SetI ASST 58 54 . . 55 58 + CviJI RGCY 56 56 . . 55 58 + AluI AGCT 56 56 . . 68 73 + EcoT22I ATGCAT 72 68 . . 69 72 + CviRI* TGCA 70 70 . . #--------------------------------------- # # # AluI: # [AGCT] # 19 56 # # ApoI: # [RAATTY] # 7 13 55 # # BdaI: # [TGANNNNNNTCA] # 0 0 8 33 34 # # CviJI: # [RGCY] # 19 56 # # CviRI*: # [TGCA] # 5 70 # # EcoT22I: # [ATGCAT] # 3 72 # # HphI: # [GGTGA] # 29 46 # # MaeIII: # [GTNAC] # 34 41 # # MfeI: # [CAATTG] # 29 46 # # SetI: # [ASST] # 17 58 # # Tsp45I: # [GTSAC] # 34 41 # # TspDTI: # [ATGAA] # 14 61 # # TspEI: # [AATT] # 7 9 13 46 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 75 # Reported_sequences: 1 # Reported_hitcount: 17 #---------------------------------------