Restriction Fragments for ARS1420



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1420 on chromosome XIV from coordinates 498970 to 499154.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.19343.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 3 8 + SfeI* CTRYAG 3 7 . . 18 21 + SetI ASST 21 17 . . 18 21 + CviJI RGCY 19 19 . . 18 21 + AluI AGCT 19 19 . . 39 44 + NlaIV GGNNCC 41 41 . . 39 43 + BmgT120I GGNCC 40 41 . . 39 43 + AvaII GGWCC 39 42 . . 39 43 + AsuI* GGNCC 39 42 . . 49 53 + BmgT120I GGNCC 50 51 . . 49 53 + AvaII GGWCC 49 52 . . 49 53 + AsuI* GGNCC 49 52 . . 52 62 + BsiYI* CCNNNNNNNGG 58 55 . . 54 57 + CviJI RGCY 55 55 . . 58 62 - Hin4II* CCTTC 52 51 . . 84 87 + SetI ASST 87 83 . . 84 87 + CviJI RGCY 85 85 . . 84 87 + AluI AGCT 85 85 . . 93 97 - TspDTI ATGAA 83 81 . . 105 108 + TspEI AATT 104 108 . . 117 121 - Hin4II* CCTTC 111 110 . . 123 127 - Hin4II* CCTTC 117 116 . . 127 130 - MnlI CCTC 120 119 . . 136 139 + TspEI AATT 135 139 . . 147 150 + TspEI AATT 146 150 . . 148 153 + VspI ATTAAT 149 151 . . 149 152 + MseI TTAA 149 151 . . 151 154 + TspEI AATT 150 154 . . 164 168 + MaeIII GTNAC 163 168 . . 174 179 - Ksp632I* CTCTTC 169 172 . . #--------------------------------------- # # # AluI: # [AGCT] # 19 66 100 # # AsuI*: # [GGNCC] # 10 39 136 # # AvaII: # [GGWCC] # 10 39 136 # # BmgT120I: # [GGNCC] # 10 40 135 # # BsiYI*: # [CCNNNNNNNGG] # 58 127 # # CviJI: # [RGCY] # 19 30 36 100 # # Hin4II*: # [CCTTC] # 6 52 59 68 # # Ksp632I*: # [CTCTTC] # 16 169 # # MaeIII: # [GTNAC] # 22 163 # # MnlI: # [CCTC] # 65 120 # # MseI: # [TTAA] # 36 149 # # NlaIV: # [GGNNCC] # 41 144 # # SetI: # [ASST] # 21 66 98 # # SfeI*: # [CTRYAG] # 3 182 # # TspDTI: # [ATGAA] # 83 102 # # TspEI: # [AATT] # 4 11 31 35 104 # # VspI: # [ATTAAT] # 36 149 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 185 # Reported_sequences: 1 # Reported_hitcount: 29 #---------------------------------------