Restriction Fragments for ARS1415



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1415 on chromosome XIV from coordinates 321921 to 322213.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.30856.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 16 19 + FatI CATG 15 19 . . 16 19 + NlaIII CATG 19 15 . . 16 19 + CviAII CATG 16 18 . . 14 18 - TspDTI ATGAA 4 2 . . 32 35 + TspEI AATT 31 35 . . 41 45 + Hpy188I TCNGA 43 42 . . 54 58 - MboII GAAGA 46 45 . . 53 58 - BbvII* GAAGAC 46 50 . . 56 60 - TspDTI ATGAA 46 44 . . 86 91 + Hpy166II GTNNAC 88 88 . . 90 93 + TaiI ACGT 93 89 . . 90 93 + SetI ASST 93 89 . . 90 93 + MaeII ACGT 90 92 . . 109 112 + SetI ASST 112 108 . . 110 113 + MnlI CCTC 120 119 . . 107 111 - HphI GGTGA 99 98 . . 121 124 + MseI TTAA 121 123 . . 132 137 + ApoI RAATTY 132 136 . . 133 136 + TspEI AATT 132 136 . . 139 143 + Hpy188I TCNGA 141 140 . . 175 179 + FokI GGATG 188 192 . . 175 179 + BseGI GGATG 181 179 . . 172 176 - BccI CCATC 166 167 . . 179 182 + CviJI RGCY 180 180 . . 176 180 - BccI CCATC 170 171 . . 183 186 + MaeI CTAG 183 185 . . 194 198 + TfiI GAWTC 194 197 . . 194 198 + HinfI GANTC 194 197 . . 239 242 + MseI TTAA 239 241 . . 258 261 + MseI TTAA 258 260 . . 260 263 + TspEI AATT 259 263 . . 263 268 + PsiI TTATAA 265 265 . . 268 273 + SspI AATATT 270 270 . . 273 278 + PsiI TTATAA 275 275 . . 283 288 + StyI CCWWGG 283 287 . . 283 288 + SecI* CCNNGG 283 287 . . #--------------------------------------- # # # ApoI: # [RAATTY] # 132 161 # # BbvII*: # [GAAGAC] # 46 247 # # BccI: # [CCATC] # 4 123 166 # # BseGI: # [GGATG] # 112 181 # # CviAII: # [CATG] # 16 277 # # CviJI: # [RGCY] # 113 180 # # FatI: # [CATG] # 15 278 # # FokI: # [GGATG] # 105 188 # # HinfI: # [GANTC] # 99 194 # # HphI: # [GGTGA] # 99 194 # # Hpy166II: # [GTNNAC] # 88 205 # # Hpy188I: # [TCNGA] # 43 98 152 # # MaeI: # [CTAG] # 110 183 # # MaeII: # [ACGT] # 90 203 # # MboII: # [GAAGA] # 46 247 # # MnlI: # [CCTC] # 120 173 # # MseI: # [TTAA] # 19 35 118 121 # # NlaIII: # [CATG] # 19 274 # # PsiI: # [TTATAA] # 10 18 265 # # SecI*: # [CCNNGG] # 10 283 # # SetI: # [ASST] # 19 93 181 # # SspI: # [AATATT] # 23 270 # # StyI: # [CCWWGG] # 10 283 # # TaiI: # [ACGT] # 93 200 # # TfiI: # [GAWTC] # 99 194 # # TspDTI: # [ATGAA] # 4 42 247 # # TspEI: # [AATT] # 31 34 101 127 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 293 # Reported_sequences: 1 # Reported_hitcount: 36 #---------------------------------------