Restriction Fragments for ARS1412



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1412 on chromosome XIV from coordinates 196134 to 196232.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.28848.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 35 39 + Hpy188I TCNGA 37 36 . . 39 42 + TaiI ACGT 42 38 . . 39 42 + SetI ASST 42 38 . . 39 42 + MaeII ACGT 39 41 . . 38 43 - BtrI CACGTC 40 40 . . 56 59 + CviJI RGCY 57 57 . . 65 69 + Tsp45I GTSAC 64 69 . . 65 69 + MaeIII GTNAC 64 69 . . 67 73 + TspRI CASTGNN 73 64 . . 73 78 + NspBII* CMGCKG 75 75 . . 73 78 + SacII CCGCGG 76 74 . . 73 78 + DsaI* CCRYGG 73 77 . . 73 78 + SecI* CCNNGG 73 77 . . 73 76 + AciI CCGC 73 75 . . 74 77 + FnuDII* CGCG 75 75 . . 75 79 + TauI GCSGC 78 75 . . 75 79 + BlsI GCNGC 77 76 . . 75 79 + BisI GCNGC 76 77 . . 77 80 + CviJI RGCY 78 78 . . 75 78 - AciI CCGC 75 77 . . 86 89 + MseI TTAA 86 88 . . 96 99 + CviAII CATG 96 98 . . #--------------------------------------- # # # AciI: # [CCGC] # 2 24 73 # # BisI: # [GCNGC] # 23 76 # # BlsI: # [GCNGC] # 22 77 # # BtrI: # [CACGTC] # 40 59 # # CviAII: # [CATG] # 3 96 # # CviJI: # [RGCY] # 21 21 57 # # DsaI*: # [CCRYGG] # 26 73 # # FnuDII*: # [CGCG] # 24 75 # # Hpy188I: # [TCNGA] # 37 62 # # MaeII: # [ACGT] # 39 60 # # MaeIII: # [GTNAC] # 35 64 # # MseI: # [TTAA] # 13 86 # # NspBII*: # [CMGCKG] # 24 75 # # SacII: # [CCGCGG] # 23 76 # # SecI*: # [CCNNGG] # 26 73 # # SetI: # [ASST] # 42 57 # # TaiI: # [ACGT] # 42 57 # # TauI: # [GCSGC] # 21 78 # # Tsp45I: # [GTSAC] # 35 64 # # TspRI: # [CASTGNN] # 26 73 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 99 # Reported_sequences: 1 # Reported_hitcount: 22 #---------------------------------------