Restriction Fragments for ARS1212



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BLAST search | Genome Restriction Map | Design Primers for this sequence


The currently selected gene/sequence is :

ARS1212 on chromosome XII from coordinates 289315 to 289444.

seqfile=/share/crumb/www-data/html/tmp/gcgseq.tmp.28338.2

Start End Strand Enzyme_name Restriction_site 5prime 3prime 5primerev 3primerev 1 6 + NspI RCATGY 5 1 . . 2 5 + FatI CATG 1 5 . . 2 5 + NlaIII CATG 5 1 . . 2 5 + CviAII CATG 2 4 . . 16 20 + Hin4II* CCTTC 26 25 . . 29 33 - SfaNI GCATC 19 23 . . 35 40 + Hpy166II GTNNAC 37 37 . . 35 40 + HpaI GTTAAC 37 37 . . 35 40 + HindII GTYRAC 37 37 . . 36 39 + MseI TTAA 36 38 . . 67 71 + Tsp4CI* ACNGT 69 68 . . 71 74 + MseI TTAA 71 73 . . 76 79 + FnuDII* CGCG 77 77 . . 80 84 + Tsp4CI* ACNGT 82 81 . . 89 93 + BlsI GCNGC 91 90 . . 89 93 + BisI GCNGC 90 91 . . 89 93 + BbvI GCAGC 101 105 . . 89 93 + TseI GCWGC 89 92 . . 99 104 + VspI ATTAAT 100 102 . . 100 103 + MseI TTAA 100 102 . . 102 105 + TspEI AATT 101 105 . . 120 124 + Tsp4CI* ACNGT 122 121 . . #--------------------------------------- # # # BbvI: # [GCAGC] # 29 101 # # BisI: # [GCNGC] # 40 90 # # BlsI: # [GCNGC] # 39 91 # # CviAII: # [CATG] # 2 128 # # FatI: # [CATG] # 1 129 # # FnuDII*: # [CGCG] # 53 77 # # Hin4II*: # [CCTTC] # 26 104 # # HindII: # [GTYRAC] # 37 93 # # HpaI: # [GTTAAC] # 37 93 # # Hpy166II: # [GTNNAC] # 37 93 # # MseI: # [TTAA] # 29 30 35 36 # # NlaIII: # [CATG] # 5 125 # # NspI: # [RCATGY] # 5 125 # # SfaNI: # [GCATC] # 19 111 # # TseI: # [GCWGC] # 41 89 # # Tsp4CI*: # [ACNGT] # 8 13 40 69 # # TspEI: # [AATT] # 29 101 # # VspI: # [ATTAAT] # 30 100 # #--------------------------------------- #--------------------------------------- # Total_sequences: 1 # Total_length: 130 # Reported_sequences: 1 # Reported_hitcount: 22 #---------------------------------------