Yeast Genome Pattern Matching Help




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Total Hits : 135
Number of Unique Sequence Entries Hit : 135
Sequences Searched : 5916
Entered nucleotide pattern : ATGCNNNNNATCG
Dataset : S. cerevisiae ORF Coding DNA
Strand : both strands

A Table of Full Results is below the Graphic

The black | on each chromosome bar indicates the matching position

Full Search Result for Hits No. 1 - 25

Sequence NameHit NumberMatching PatternMatching PositionsMatching ResultRetrieveLocus Information
BeginEnd
YAL017W/PSK11ATGCCCTACATCG113SequenceRestrictionMapPAS domain-containing serine/threonine protein kinase
YAR019C/CDC151CGATACCCAGCAT11761188SequenceRestrictionMapProtein kinase of the Mitotic Exit Network
R0010W/FLP11CGATACCCCGCAT11951207SequenceRestrictionMapSite-specific recombinase encoded on the 2-micron plasmid
YBR033W/EDS11ATGCTACGAATCG25862598SequenceRestrictionMapPutative zinc cluster protein, predicted to be a transcription factor
YBR086C/IST21CGATGATTTGCAT255267SequenceRestrictionMapCortical ER protein involved in ER-plasma membrane tethering
YBR117C/TKL21CGATACGAGGCAT616628SequenceRestrictionMapTransketolase
YBR136W/MEC11ATGCTCGCGATCG52675279SequenceRestrictionMapGenome integrity checkpoint protein and PI kinase superfamily member
YBR151W/APD11CGATTGGCAGCAT264276SequenceRestrictionMapProtein of unknown function
YBR203W/COS1111CGATTCGGGGCAT15121524SequenceRestrictionMapProtein required for antifungal drug ciclopirox olamine resistance
YBR221C/PDB11ATGCAAGCTATCG367379SequenceRestrictionMapE1 beta subunit of the pyruvate dehydrogenase (PDH) complex
YBR225W1ATGCTTTCCATCG909921SequenceRestrictionMapPutative protein of unknown function
YBR275C/RIF11CGATTTACCGCAT377389SequenceRestrictionMapProtein that binds to the Rap1p C-terminus
YCL016C/DCC11CGATCTACAGCAT603615SequenceRestrictionMapSubunit of a complex with Ctf8p and Ctf18p
YCL038C/ATG221CGATAAAACGCAT14311443SequenceRestrictionMapVacuolar integral membrane protein required for efflux of amino acids
YCL061C/MRC11CGATGAACTGCAT10771089SequenceRestrictionMapS-phase checkpoint protein required for DNA replication
YDL090C/RAM11CGATATAGCGCAT93105SequenceRestrictionMapBeta subunit of the CAAX farnesyltransferase (FTase)
YDL110C/TMA171CGATAAGCGGCAT5668SequenceRestrictionMapATPase dedicated chaperone that adapts proteasome assembly to stress
YDL145C/COP11ATGCAAAATATCG21672179SequenceRestrictionMapAlpha subunit of COPI vesicle coatomer complex
YDL155W/CLB31CGATTACGAGCAT936948SequenceRestrictionMapB-type cyclin involved in cell cycle progression
YDL195W/SEC311ATGCACTGAATCG420432SequenceRestrictionMapComponent of the Sec13p-Sec31p complex of the COPII vesicle coat
YDR109C1CGATTTCTCGCAT7789SequenceRestrictionMapPutative kinase
YDR122W/KIN11ATGCCATCCATCG26382650SequenceRestrictionMapSerine/threonine protein kinase involved in regulation of exocytosis
YDR160W/SSY11ATGCTTTCTATCG862874SequenceRestrictionMapComponent of the SPS plasma membrane amino acid sensor system
YDR175C/RSM241CGATTAGCCGCAT466478SequenceRestrictionMapMitochondrial ribosomal protein of the small subunit
YDR204W/COQ41CGATCCTATGCAT585597SequenceRestrictionMapProtein with a role in ubiquinone (Coenzyme Q) biosynthesis

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