Yeast Genome Pattern Matching Help




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Total Hits : 50
Number of Unique Sequence Entries Hit : 50
Sequences Searched : 5916
Entered nucleotide pattern : AATTTGGRGGR
Dataset : S. cerevisiae ORF Coding DNA
Strand : both strands

A Table of Full Results is below the Graphic

The black | on each chromosome bar indicates the matching position

Full Search Result for Hits No. 1 - 25

Sequence NameHit NumberMatching PatternMatching PositionsMatching ResultRetrieveLocus Information
BeginEnd
YAR009C1CCCCCCAAATT13401350SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YBL005W-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YBR012W-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YBR017C/KAP1041AATTTGGAGGA21942204SequenceRestrictionMapTransportin or cytosolic karyopherin beta 2
YBR033W/EDS11AATTTGGGGGA560570SequenceRestrictionMapPutative zinc cluster protein, predicted to be a transcription factor
YBR223C/TDP11CCCTCCAAATT823833SequenceRestrictionMapTyrosyl-DNA phosphodiesterase I
YDR098C-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YDR128W/MTC51CCCCCCAAATT14711481SequenceRestrictionMapSubunit of SEACAT, a subcomplex of the SEA complex
YDR210C-D1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YDR261C-D1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YDR316W-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YDR365W-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YDR374C/PHO921TCCCCCAAATT2434SequenceRestrictionMapPosttranscriptional regulator of phosphate metabolism
YER138C1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YER160C1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YGR027W-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YGR038C-B1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YGR161C-D1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YGR260W/TNA11AATTTGGAGGA820830SequenceRestrictionMapHigh affinity nicotinic acid plasma membrane permease
YHR214C-B1CCCCCCAAATT31313141SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YIL090W/ICE21TCCCCCAAATT787797SequenceRestrictionMapIntegral ER membrane protein with type-III transmembrane domains
YJL149W/DAS11TCCTCCAAATT624634SequenceRestrictionMapPutative SCF ubiquitin ligase F-box protein
YJR027W1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YJR029W1CCCCCCAAATT30173027SequenceRestrictionMapRetrotransposon TYA Gag and TYB Pol genes
YJR036C/HUL41CCCTCCAAATT17941804SequenceRestrictionMapProtein with similarity to hect domain E3 ubiquitin-protein ligases

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