AboutBlogDownloadExploreHelpGet Data
Email Us Mastodon BlueSky Facebook LinkedIn YouTube
Saccharomyces Genome Database
  • Saccharomyces Genome Database
    Saccharomyces Genome Database
  • Menu
  • Analyze
    • Gene Lists
    • BLAST
    • Fungal BLAST
    • GO Term Finder
    • GO Slim Mapper
    • Pattern Matching
    • Design Primers
    • Restriction Site Mapper
  • Sequence
    • Download
    • Genome Browser
    • BLAST
    • Fungal BLAST
    • Gene/Sequence Resources
    • Reference Genome
      • Download Genome
      • Genome Snapshot
      • Chromosome History
      • Systematic Sequencing Table
      • Original Sequence Papers
    • Strains and Species
      • Variant Viewer
      • Align Strain Sequences
    • Resources
      • UniProtKB
      • InterPro (EBI)
      • HomoloGene (NCBI)
      • YGOB (Trinity College)
      • AlphaFold
  • Function
    • Gene Ontology
      • GO Term Finder
      • GO Slim Mapper
      • GO Slim Mapping File
    • Expression
    • Biochemical Pathways
    • Phenotypes
      • Browse All Phenotypes
    • Interactions
    • YeastGFP
    • Resources
      • GO Consortium
      • BioGRID (U. Toronto)
  • Literature
    • Full-text Search
    • New Yeast Papers
    • YeastBook
    • Resources
      • PubMed (NCBI)
      • PubMed Central (NCBI)
      • Google Scholar
  • Community
    • Community Forum
    • Colleague Information
      • Find a Colleague
      • Add or Update Info
      • Find a Yeast Lab
    • Education
    • Meetings
    • Nomenclature
      • Submit a Gene Registration
      • Gene Registry
      • Nomenclature Conventions
    • Methods and Reagents
      • Strains
    • Historical Data
      • Physical & Genetic Maps
      • Genetic Maps
      • Genetic Loci
      • ORFMap Chromosomes
      • Sequence
    • Submit Data
    • API
  • Info & Downloads
    • About
    • Blog
    • Downloads
    • Site Map
    • Help
  • Author: Shimizu T
  • References

Author: Shimizu T


References 23 references


No citations for this author.

Download References (.nbib)

  • Okada T, et al. (2016) Plasma-on-chip device for stable irradiation of cells cultured in media with a low-temperature atmospheric pressure plasma. Arch Biochem Biophys 605:11-8 PMID:27059851
    • SGD Paper
    • DOI full text
    • PubMed
  • Hishiki A, et al. (2015) Structure of a Novel DNA-binding Domain of Helicase-like Transcription Factor (HLTF) and Its Functional Implication in DNA Damage Tolerance. J Biol Chem 290(21):13215-23 PMID:25858588
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Takahashi K, et al. (2014) Role of prolyl isomerase pin1 in pathogenesis of diseases and remedy for the diseases from natural products. Curr Drug Targets 15(10):973-81 PMID:25182609
    • SGD Paper
    • PubMed
  • Morozumi Y, et al. (2013) Homologous pairing activities of two rice RAD51 proteins, RAD51A1 and RAD51A2. PLoS One 8(10):e75451 PMID:24124491
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chiyoda T, et al. (2012) LATS1/WARTS phosphorylates MYPT1 to counteract PLK1 and regulate mammalian mitotic progression. J Cell Biol 197(5):625-41 PMID:22641346
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Hishiki A, et al. (2008) Crystallographic study of G178S mutant of human proliferating cell nuclear antigen. Acta Crystallogr Sect F Struct Biol Cryst Commun 64(Pt 9):819-21 PMID:18765913
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Shiozawa K, et al. (2006) The common phospholipid-binding activity of the N-terminal domains of PEX1 and VCP/p97. FEBS J 273(21):4959-71 PMID:17018057
    • SGD Paper
    • DOI full text
    • PubMed
  • Ubukata T, et al. (2003) Cleavage, but not read-through, stimulation activity is responsible for three biologic functions of transcription elongation factor S-II. J Biol Chem 278(10):8580-5 PMID:12496271
    • SGD Paper
    • DOI full text
    • PubMed
  • Yamauchi T, et al. (2003) Cloning of adiponectin receptors that mediate antidiabetic metabolic effects. Nature 423(6941):762-9 PMID:12802337
    • SGD Paper
    • DOI full text
    • PubMed
  • Shimizu T, et al. (2002) Active-site architecture of endopolygalacturonase I from Stereum purpureum revealed by crystal structures in native and ligand-bound forms at atomic resolution. Biochemistry 41(21):6651-9 PMID:12022868
    • SGD Paper
    • DOI full text
    • PubMed
  • Nakai D, et al. (2001) Mouse homologue of coq7/clk-1, longevity gene in Caenorhabditis elegans, is essential for coenzyme Q synthesis, maintenance of mitochondrial integrity, and neurogenesis. Biochem Biophys Res Commun 289(2):463-71 PMID:11716496
    • SGD Paper
    • DOI full text
    • PubMed
  • Shimizu T, et al. (2001) Crystallization and preliminary X-ray study of endopolygalacturonase from the pathogenic fungus Stereum purpureum. Acta Crystallogr D Biol Crystallogr 57(Pt 8):1171-3 PMID:11468409
    • SGD Paper
    • DOI full text
    • PubMed
  • Takahashi M, et al. (2001) Mouse coq7/clk-1 orthologue rescued slowed rhythmic behavior and extended life span of clk-1 longevity mutant in Caenorhabditis elegans. Biochem Biophys Res Commun 286(3):534-40 PMID:11511092
    • SGD Paper
    • DOI full text
    • PubMed
  • Fujii Y, et al. (2000) Structural basis for the diversity of DNA recognition by bZIP transcription factors. Nat Struct Biol 7(10):889-93 PMID:11017199
    • SGD Paper
    • DOI full text
    • PubMed
  • Shimizu T, et al. (2000) Determination of glycosylation sites, disulfide bridges, and the C-terminus of Stereum purpureum mature endopolygalacturonase I by electrospray ionization mass spectrometry. Eur J Biochem 267(8):2380-9 PMID:10759864
    • SGD Paper
    • DOI full text
    • PubMed
  • Shimizu T, et al. (2000) An open conformation of switch I revealed by the crystal structure of a Mg2+-free form of RHOA complexed with GDP. Implications for the GDP/GTP exchange mechanism. J Biol Chem 275(24):18311-7 PMID:10748207
    • SGD Paper
    • DOI full text
    • PubMed
  • Maesaki R, et al. (1999) The structural basis of Rho effector recognition revealed by the crystal structure of human RhoA complexed with the effector domain of PKN/PRK1. Mol Cell 4(5):793-803 PMID:10619026
    • SGD Paper
    • DOI full text
    • PubMed
  • Maesaki R, et al. (1999) Biochemical and crystallographic characterization of a Rho effector domain of the protein serine/threonine kinase N in a complex with RhoA. J Struct Biol 126(2):166-70 PMID:10388627
    • SGD Paper
    • DOI full text
    • PubMed
  • Ihara K, et al. (1998) Crystal structure of human RhoA in a dominantly active form complexed with a GTP analogue. J Biol Chem 273(16):9656-66 PMID:9545299
    • SGD Paper
    • DOI full text
    • PubMed
  • Shimizu T, et al. (1997) Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition. EMBO J 16(15):4689-97 PMID:9303313
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Nureki O, et al. (1995) Architectures of class-defining and specific domains of glutamyl-tRNA synthetase. Science 267(5206):1958-65 PMID:7701318
    • SGD Paper
    • DOI full text
    • PubMed
  • Hiroya K, et al. (1994) Differential roles of Glu318 and Thr319 in cytochrome P450 1A2 catalysis supported by NADPH-cytochrome P450 reductase and tert-butyl hydroperoxide. Arch Biochem Biophys 310(2):397-401 PMID:7910007
    • SGD Paper
    • DOI full text
    • PubMed
  • Mayuzumi H, et al. (1993) Effect of mutations of ionic amino acids of cytochrome P450 1A2 on catalytic activities toward 7-ethoxycoumarin and methanol. Biochemistry 32(21):5622-8 PMID:8504082
    • SGD Paper
    • DOI full text
    • PubMed
  • SGD
  • About
  • Blog
  • Help
  • Privacy Policy
  • Creative Commons License
© Stanford University, Stanford, CA 94305.
Back to Top