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  • Author: Rocha I
  • References

Author: Rocha I


References 13 references


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  • Faustino M, et al. (2024) Mathematical kinetic modelling followed by in vitro and in vivo assays reveal the bifunctional rice GTPCHII/DHBPS enzymes and demonstrate the key roles of OsRibA proteins in the vitamin B2 pathway. BMC Plant Biol 24(1):220 PMID:38532321
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  • Pereira F, et al. (2021) Model-guided development of an evolutionarily stable yeast chassis. Mol Syst Biol 17(7):e10253 PMID:34292675
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  • Kallscheuer N, et al. (2019) Identification and Microbial Production of the Raspberry Phenol Salidroside that Is Active against Huntington's Disease. Plant Physiol 179(3):969-985 PMID:30397021
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  • Pereira R, et al. (2019) Turnover Dependent Phenotypic Simulation: A Quantitative Constraint-Based Simulation Method That Accommodates All Main Strain Design Strategies. ACS Synth Biol 8(5):976-988 PMID:30925047
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  • Vieira V, et al. (2019) Comparison of pathway analysis and constraint-based methods for cell factory design. BMC Bioinformatics 20(1):350 PMID:31221092
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  • Faria C, et al. (2018) Production of mannosylglycerate in Saccharomyces cerevisiae by metabolic engineering and bioprocess optimization. Microb Cell Fact 17(1):178 PMID:30445960
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  • Lopes H and Rocha I (2017) Genome-scale modeling of yeast: chronology, applications and critical perspectives. FEMS Yeast Res 17(5) PMID:28899034
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  • Liu F, et al. (2015) Development and application of efficient pathway enumeration algorithms for metabolic engineering applications. Comput Methods Programs Biomed 118(2):134-46 PMID:25580014
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  • Carneiro S, et al. (2014) Yeast metabolomics: sample preparation for a GC/MS-based analysis. Methods Mol Biol 1152:197-207 PMID:24744035
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  • Gomes D, et al. (2014) Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis. BMC Genomics 15(1):810 PMID:25253284
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  • Soons ZI, et al. (2013) Identification of metabolic engineering targets through analysis of optimal and sub-optimal routes. PLoS One 8(4):e61648 PMID:23626708
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  • Rocha M, et al. (2008) Natural computation meta-heuristics for the in silico optimization of microbial strains. BMC Bioinformatics 9:499 PMID:19038030
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  • Patil KR, et al. (2005) Evolutionary programming as a platform for in silico metabolic engineering. BMC Bioinformatics 6:308 PMID:16375763
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