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  • Author: Jonas F
  • References

Author: Jonas F


References 17 references


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  • Gera T, et al. (2024) ChEC-Seq: A Comprehensive Guide for Scalable and Cost-Efficient Genome-Wide Profiling in Saccharomyces cerevisiae. Methods Mol Biol 2846:263-283 PMID:39141241
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  • Hurieva B, et al. (2024) Disordered sequences of transcription factors regulate genomic binding by integrating diverse sequence grammars and interaction types. Nucleic Acids Res 52(15):8763-8777 PMID:38908024
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  • Jana Lang T, et al. (2024) Massively parallel binding assay (MPBA) reveals limited transcription factor binding cooperativity, challenging models of specificity. Nucleic Acids Res 52(20):12227-12243 PMID:39413205
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  • Mindel V, et al. (2024) Intrinsically disordered regions of the Msn2 transcription factor encode multiple functions using interwoven sequence grammars. Nucleic Acids Res 52(5):2260-2272 PMID:38109289
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  • Zigdon I, et al. (2024) Beyond RNA-binding domains: determinants of protein-RNA binding. RNA 30(12):1620-1633 PMID:39353735
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  • Jonas F, et al. (2023) The molecular grammar of protein disorder guiding genome-binding locations. Nucleic Acids Res 51(10):4831-4844 PMID:36938874
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  • Jonas F, et al. (2023) Nucleosome retention by histone chaperones and remodelers occludes pervasive DNA-protein binding. Nucleic Acids Res 51(16):8496-8513 PMID:37493599
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  • Kumar DK, et al. (2023) Complementary strategies for directing in vivo transcription factor binding through DNA binding domains and intrinsically disordered regions. Mol Cell 83(9):1462-1473.e5 PMID:37116493
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  • Gera T, et al. (2022) Evolution of binding preferences among whole-genome duplicated transcription factors. Elife 11 PMID:35404235
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  • Jonas F, et al. (2022) Rtt109 promotes nucleosome replacement ahead of the replication fork. Genome Res 32(6):1089-1098 PMID:35609993
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  • Frenkel N, et al. (2021) Rtt109 slows replication speed by histone N-terminal acetylation. Genome Res 31(3):426-435 PMID:33563717
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  • Hurst V, et al. (2021) A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress. EMBO J 40(21):e108439 PMID:34569643
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  • Lupo O, et al. (2021) Accumulation of cis- and trans-regulatory variations is associated with phenotypic divergence of a complex trait between yeast species. G3 (Bethesda) 11(2) PMID:33609368
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  • Yaakov G, et al. (2021) Measurement of histone replacement dynamics with genetically encoded exchange timers in yeast. Nat Biotechnol 39(11):1434-1443 PMID:34239087
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  • Yaakov G, et al. (2021) Publisher Correction: Measurement of histone replacement dynamics with genetically encoded exchange timers in yeast. Nat Biotechnol 39(11):1467 PMID:34584249
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  • Jonas F, et al. (2018) A Visual Framework for Classifying Determinants of Cell Size. Cell Rep 25(12):3519-3529.e2 PMID:30566874
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  • Cohen N, et al. (2017) Iron affects Ire1 clustering propensity and the amplitude of endoplasmic reticulum stress signaling. J Cell Sci 130(19):3222-3233 PMID:28794014
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