AboutBlogDownloadExploreHelpGet Data
Email Us Mastodon BlueSky Facebook LinkedIn YouTube
Saccharomyces Genome Database
  • Saccharomyces Genome Database
    Saccharomyces Genome Database
  • Menu
  • Analyze
    • Gene Lists
    • BLAST
    • Fungal BLAST
    • GO Term Finder
    • GO Slim Mapper
    • Pattern Matching
    • Design Primers
    • Restriction Site Mapper
  • Sequence
    • Download
    • Genome Browser
    • BLAST
    • Fungal BLAST
    • Gene/Sequence Resources
    • Reference Genome
      • Download Genome
      • Genome Snapshot
      • Chromosome History
      • Systematic Sequencing Table
      • Original Sequence Papers
    • Strains and Species
      • Variant Viewer
      • Align Strain Sequences
    • Resources
      • UniProtKB
      • InterPro (EBI)
      • HomoloGene (NCBI)
      • YGOB (Trinity College)
      • AlphaFold
  • Function
    • Gene Ontology
      • GO Term Finder
      • GO Slim Mapper
      • GO Slim Mapping File
    • Expression
    • Biochemical Pathways
    • Phenotypes
      • Browse All Phenotypes
    • Interactions
    • YeastGFP
    • Resources
      • GO Consortium
      • BioGRID (U. Toronto)
  • Literature
    • Full-text Search
    • New Yeast Papers
    • YeastBook
    • Resources
      • PubMed (NCBI)
      • PubMed Central (NCBI)
      • Google Scholar
  • Community
    • Community Forum
    • Colleague Information
      • Find a Colleague
      • Add or Update Info
      • Find a Yeast Lab
    • Education
    • Meetings
    • Nomenclature
      • Submit a Gene Registration
      • Gene Registry
      • Nomenclature Conventions
    • Methods and Reagents
      • Strains
    • Historical Data
      • Physical & Genetic Maps
      • Genetic Maps
      • Genetic Loci
      • ORFMap Chromosomes
      • Sequence
    • Submit Data
    • API
  • Info & Downloads
    • About
    • Blog
    • Downloads
    • Site Map
    • Help
  • Author: Ficner R
  • References

Author: Ficner R


References 32 references


No citations for this author.

Download References (.nbib)

  • Enders M, et al. (2023) Structure and function of spliceosomal DEAH-box ATPases. Biol Chem 404(8-9):851-866 PMID:37441768
    • SGD Paper
    • DOI full text
    • PubMed
  • Gomkale R, et al. (2021) Mapping protein interactions in the active TOM-TIM23 supercomplex. Nat Commun 12(1):5715 PMID:34588454
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Munzel L, et al. (2021) Atg21 organizes Atg8 lipidation at the contact of the vacuole with the phagophore. Autophagy 17(6):1458-1478 PMID:32515645
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Hamann F, et al. (2020) Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2. Proc Natl Acad Sci U S A 117(6):2948-2956 PMID:31974312
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Linden A, et al. (2020) A Cross-linking Mass Spectrometry Approach Defines Protein Interactions in Yeast Mitochondria. Mol Cell Proteomics 19(7):1161-1178 PMID:32332106
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Shaikhqasem A, et al. (2020) Characterization of Inhibition Reveals Distinctive Properties for Human and Saccharomyces cerevisiae CRM1. J Med Chem 63(14):7545-7558 PMID:32585100
    • SGD Paper
    • DOI full text
    • PubMed
  • Ficner R, et al. (2017) Studying structure and function of spliceosomal helicases. Methods 125:63-69 PMID:28668587
    • SGD Paper
    • DOI full text
    • PubMed
  • Fourmann JB, et al. (2017) Regulation of Prp43-mediated disassembly of spliceosomes by its cofactors Ntr1 and Ntr2. Nucleic Acids Res 45(7):4068-4080 PMID:27923990
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Tauchert MJ, et al. (2017) Structural insights into the mechanism of the DEAH-box RNA helicase Prp43. Elife 6 PMID:28092261
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Fourmann JB, et al. (2016) The target of the DEAH-box NTP triphosphatase Prp43 in Saccharomyces cerevisiae spliceosomes is the U2 snRNP-intron interaction. Elife 5 PMID:27115347
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Tauchert MJ, et al. (2016) Structural and functional analysis of the RNA helicase Prp43 from the thermophilic eukaryote Chaetomium thermophilum. Acta Crystallogr F Struct Biol Commun 72(Pt 2):112-20 PMID:26841761
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Melin J, et al. (2015) A presequence-binding groove in Tom70 supports import of Mdl1 into mitochondria. Biochim Biophys Acta 1853(8):1850-9 PMID:25958336
    • SGD Paper
    • DOI full text
    • PubMed
  • Christian H, et al. (2014) Insights into the activation of the helicase Prp43 by biochemical studies and structural mass spectrometry. Nucleic Acids Res 42(2):1162-79 PMID:24165877
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Khoshnevis S, et al. (2014) Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes. Nucleic Acids Res 42(6):4123-39 PMID:24423867
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kuhle B and Ficner R (2014) Structural insight into the recognition of amino-acylated initiator tRNA by eIF5B in the 80S initiation complex. BMC Struct Biol 14:20 PMID:25350701
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Lehneck R, et al. (2014) Crystal structures of two tetrameric β-carbonic anhydrases from the filamentous ascomycete Sordaria macrospora. FEBS J 281(7):1759-72 PMID:24506675
    • SGD Paper
    • DOI full text
    • PubMed
  • Fourmann JB, et al. (2013) Dissection of the factor requirements for spliceosome disassembly and the elucidation of its dissociation products using a purified splicing system. Genes Dev 27(4):413-28 PMID:23431055
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Khoshnevis S, et al. (2012) Novel insights into the architecture and protein interaction network of yeast eIF3. RNA 18(12):2306-19 PMID:23105002
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kudlinzki D, et al. (2012) Structural analysis of the C-terminal domain of the spliceosomal helicase Prp22. Biol Chem 393(10):1131-40 PMID:23096351
    • SGD Paper
    • DOI full text
    • PubMed
  • Schulz C, et al. (2011) Tim50's presequence receptor domain is essential for signal driven transport across the TIM23 complex. J Cell Biol 195(4):643-56 PMID:22065641
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Khoshnevis S, et al. (2010) Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b. PLoS One 5(9) PMID:20862284
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Khoshnevis S, et al. (2010) The iron-sulphur protein RNase L inhibitor functions in translation termination. EMBO Rep 11(3):214-9 PMID:20062004
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kudlinzki D, et al. (2009) Crystallization and preliminary X-ray diffraction analysis of the C-terminal domain of the human spliceosomal DExD/H-box protein hPrp22. Acta Crystallogr Sect F Struct Biol Cryst Commun 65(Pt 9):956-8 PMID:19724143
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Padmanabhan N, et al. (2009) The yeast HtrA orthologue Ynm3 is a protease with chaperone activity that aids survival under heat stress. Mol Biol Cell 20(1):68-77 PMID:18946088
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Warkocki Z, et al. (2009) Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components. Nat Struct Mol Biol 16(12):1237-43 PMID:19935684
    • SGD Paper
    • DOI full text
    • PubMed
  • Grimm C, et al. (2000) The crystal structure of 3alpha -hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni shows a novel oligomerization pattern within the short chain dehydrogenase/reductase family. J Biol Chem 275(52):41333-9 PMID:11007791
    • SGD Paper
    • DOI full text
    • PubMed
  • Reidt U, et al. (2000) Crystal structure of the human U4/U6 small nuclear ribonucleoprotein particle-specific SnuCyp-20, a nuclear cyclophilin. J Biol Chem 275(11):7439-42 PMID:10713041
    • SGD Paper
    • DOI full text
    • PubMed
  • Mofid MR, et al. (1999) Crystallization and preliminary crystallographic studies of Sfp: a phosphopantetheinyl transferase of modular peptide synthetases. Acta Crystallogr D Biol Crystallogr 55(Pt 5):1098-100 PMID:10216318
    • SGD Paper
    • DOI full text
    • PubMed
  • Nottrott S, et al. (1999) Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5' stem-loop of U4 snRNA. EMBO J 18(21):6119-33 PMID:10545122
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Reuter K and Ficner R (1999) Overproduction, purification, crystallization and preliminary x-ray diffraction studies of the human spliceosomal protein U5-15kD. Acta Crystallogr D Biol Crystallogr 55(Pt 4):888-90 PMID:10089325
    • SGD Paper
    • DOI full text
    • PubMed
  • Reuter K, et al. (1999) Crystal structure of the surfactin synthetase-activating enzyme sfp: a prototype of the 4'-phosphopantetheinyl transferase superfamily. EMBO J 18(23):6823-31 PMID:10581256
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Reuter K, et al. (1999) Identification, characterization and crystal structure analysis of the human spliceosomal U5 snRNP-specific 15 kD protein. J Mol Biol 294(2):515-25 PMID:10610776
    • SGD Paper
    • DOI full text
    • PubMed
  • SGD
  • About
  • Blog
  • Help
  • Privacy Policy
  • Creative Commons License
© Stanford University, Stanford, CA 94305.
Back to Top