AboutBlogDownloadExploreHelpGet Data
Email Us Mastodon BlueSky Facebook LinkedIn YouTube
Saccharomyces Genome Database
  • Saccharomyces Genome Database
    Saccharomyces Genome Database
  • Menu
  • Analyze
    • Gene Lists
    • BLAST
    • Fungal BLAST
    • GO Term Finder
    • GO Slim Mapper
    • Pattern Matching
    • Design Primers
    • Restriction Site Mapper
  • Sequence
    • Download
    • Genome Browser
    • BLAST
    • Fungal BLAST
    • Gene/Sequence Resources
    • Reference Genome
      • Download Genome
      • Genome Snapshot
      • Chromosome History
      • Systematic Sequencing Table
      • Original Sequence Papers
    • Strains and Species
      • Variant Viewer
      • Align Strain Sequences
    • Resources
      • UniProtKB
      • InterPro (EBI)
      • HomoloGene (NCBI)
      • YGOB (Trinity College)
      • AlphaFold
  • Function
    • Gene Ontology
      • GO Term Finder
      • GO Slim Mapper
      • GO Slim Mapping File
    • Expression
    • Biochemical Pathways
    • Phenotypes
      • Browse All Phenotypes
    • Interactions
    • YeastGFP
    • Resources
      • GO Consortium
      • BioGRID (U. Toronto)
  • Literature
    • Full-text Search
    • New Yeast Papers
    • YeastBook
    • Resources
      • PubMed (NCBI)
      • PubMed Central (NCBI)
      • Google Scholar
  • Community
    • Community Forum
    • Colleague Information
      • Find a Colleague
      • Add or Update Info
      • Find a Yeast Lab
    • Education
    • Meetings
    • Nomenclature
      • Submit a Gene Registration
      • Gene Registry
      • Nomenclature Conventions
    • Methods and Reagents
      • Strains
    • Historical Data
      • Physical & Genetic Maps
      • Genetic Maps
      • Genetic Loci
      • ORFMap Chromosomes
      • Sequence
    • Submit Data
    • API
  • Info & Downloads
    • About
    • Blog
    • Downloads
    • Site Map
    • Help
  • Author: Barrass JD
  • References

Author: Barrass JD


References 17 references


No citations for this author.

Download References (.nbib)

  • Barrass JD and Beggs JD (2019) Extremely Rapid and Specific Metabolic Labelling of RNA In Vivo with 4-Thiouracil (Ers4tU). J Vis Exp PMID:31498317
    • SGD Paper
    • DOI full text
    • PubMed
  • Mendoza-Ochoa GI, et al. (2019) A fast and tuneable auxin-inducible degron for depletion of target proteins in budding yeast. Yeast 36(1):75-81 PMID:30375036
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Mendoza-Ochoa GI, et al. (2019) Blocking late stages of splicing quickly limits pre-spliceosome assembly in vivo. RNA Biol 16(12):1775-1784 PMID:31671032
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Tudek A, et al. (2018) A Nuclear Export Block Triggers the Decay of Newly Synthesized Polyadenylated RNA. Cell Rep 24(9):2457-2467.e7 PMID:30157437
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Barrass JD, et al. (2015) Transcriptome-wide RNA processing kinetics revealed using extremely short 4tU labeling. Genome Biol 16:282 PMID:26679539
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Gautam A, et al. (2015) Cwc21p promotes the second step conformation of the spliceosome and modulates 3' splice site selection. Nucleic Acids Res 43(6):3309-17 PMID:25740649
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Chathoth KT, et al. (2014) A splicing-dependent transcriptional checkpoint associated with prespliceosome formation. Mol Cell 53(5):779-90 PMID:24560925
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Cordin O, et al. (2014) Brr2p carboxy-terminal Sec63 domain modulates Prp16 splicing RNA helicase. Nucleic Acids Res 42(22):13897-910 PMID:25428373
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Swiatkowska A, et al. (2012) Kinetic analysis of pre-ribosome structure in vivo. RNA 18(12):2187-200 PMID:23093724
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Alexander RD, et al. (2010) Splicing-dependent RNA polymerase pausing in yeast. Mol Cell 40(4):582-93 PMID:21095588
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Alexander RD, et al. (2010) RiboSys, a high-resolution, quantitative approach to measure the in vivo kinetics of pre-mRNA splicing and 3'-end processing in Saccharomyces cerevisiae. RNA 16(12):2570-80 PMID:20974745
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Grainger RJ, et al. (2009) Physical and genetic interactions of yeast Cwc21p, an ortholog of human SRm300/SRRM2, suggest a role at the catalytic center of the spliceosome. RNA 15(12):2161-73 PMID:19854871
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kafasla P, et al. (2009) Interaction of yeast eIF4G with spliceosome components: implications in pre-mRNA processing events. RNA Biol 6(5):563-74 PMID:19838078
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Kershaw CJ, et al. (2009) Mutations in the U5 snRNA result in altered splicing of subsets of pre-mRNAs and reduced stability of Prp8. RNA 15(7):1292-304 PMID:19447917
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Boon KL, et al. (2007) prp8 mutations that cause human retinitis pigmentosa lead to a U5 snRNP maturation defect in yeast. Nat Struct Mol Biol 14(11):1077-83 PMID:17934474
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Boon KL, et al. (2006) Yeast ntr1/spp382 mediates prp43 function in postspliceosomes. Mol Cell Biol 26(16):6016-23 PMID:16880513
    • SGD Paper
    • DOI full text
    • PMC full text
    • PubMed
  • Barrass JD and Beggs JD (2003) Splicing goes global. Trends Genet 19(6):295-8 PMID:12801718
    • SGD Paper
    • DOI full text
    • PubMed
  • SGD
  • About
  • Blog
  • Help
  • Privacy Policy
  • Creative Commons License
© Stanford University, Stanford, CA 94305.
Back to Top