http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml This is the SGD news feed. The goal of this feed is to inform our users about new features in SGD and to promote communication within the yeast community. en http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/cache/NewPapersThisWeek.html During the past week, 65 new papers have been added to SGD. http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#020810_1 Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Summary Paragraphs Added During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005873#summaryParagraph">REV1/YOR346W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000006088#summaryParagraph">REV3/YPL167C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001401#summaryParagraph">REV7/YIL139C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005736#summaryParagraph">RPB10/YOR210W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005365#summaryParagraph">RPB11/YOL005C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005677#summaryParagraph">RPB2/YOR151C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001283#summaryParagraph">RPB3/YIL021W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000003676#summaryParagraph">RPB4/YJL140W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000000358#summaryParagraph">RPB5/YBR154C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000002812#summaryParagraph">RPB7/YDR404C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005750#summaryParagraph">RPB8/YOR224C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000003038#summaryParagraph">RPB9/YGL070C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001185#summaryParagraph">RPC10/YHR143W-A</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000002299#summaryParagraph">RPO21/YDL140C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000006391#summaryParagraph">RPO26/YPR187W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000000927#summaryParagraph">RSP5/YER125W</a></td> <td><br /></td> <td><br /></td> <td><br /></td> <td><br /></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#020810_2 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003225">ADH4/YGL256W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001579">CWP1/YKL096W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001742">DAL80/YKR034W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000367">DEM1/YBR163W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000380">ECM31/YBR176W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002443">EHD3/YDR036C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005844">FAA1/YOR317W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000817">FAA2/YER015W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001271">FAA3/YIL009W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004860">FAA4/YMR246W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000245">FAT1/YBR041W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006308">FHL1/YPR104C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001101">FYV4/YHR059W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006012">GLR1/YPL091W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005420">GPD2/YOL059W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000540">GRX1/YCL035C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001024">GUT1/YHL032C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001259">IMD2/YHR216W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006265">JID1/YPR061C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004178">MDL1/YLR188W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006191">MDL2/YPL270W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001247">MNL1/YHR204W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001492">MRT4/YKL009W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002901">MZM1/YDR493W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002946">PAD1/YDR538W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000763">RAD23/YEL037C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003026">RAD6/YGL058W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005873">REV1/YOR346W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006088">REV3/YPL167C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001401">REV7/YIL139C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006269">ROX1/YPR065W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004332">RPP0/YLR340W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002550">SAN1/YDR143C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002577">SEC7/YDR170C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004930">TGL3/YMR313C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005607">TGL5/YOR081C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001159">TOM71/YHR117W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004033">TRX1/YLR043C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003441">TRX2/YGR209C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003416">UBR1/YGR184C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006008">YDC1/YPL087W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000843">YEN1/YER041W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000387">YPC1/YBR183W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001465">YVH1/YIR026C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004271">YLR281C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004281">YLR290C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005066">YNL122C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000007317">tD(GUC)Q</a></td> <td><br /></td> <td><br /></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#020110_1 Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: <a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001393#summaryParagraph">FKH1/YIL131C</a> and <a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005012#summaryParagraph">FKH2/YNL068C</a> . http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#020110_2 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001744">CAF4/YKR036C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003924">DNM1/YLL001W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001327">FIS1/YIL065C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001393">FKH1/YIL131C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005012">FKH2/YNL068C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003648">MDV1/YJL112W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002264">PHO2/YDL106C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001930">PHO4/YFR034C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005361">PHO80/YOL001W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003465">PHO81/YGR233C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005952">PHO85/YPL031C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003013">RIM8/YGL045W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003824">RPA12/YJR063W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006214">RPA135/YPR010C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002563">RPA14/YDR156W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005868">RPA190/YOR341W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003684">RPA34/YJL148W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005867">RPA43/YOR340C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005192">RPA49/YNL248C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005057">RPC19/YNL113W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006314">RPC40/YPR110C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001608">RRN3/YKL125W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004131">RRN5/YLR141W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000110">RRN6/YBL014C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003562">RRN7/YJL025W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004883">RRN9/YMR270C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000028">SNC1/YAL030W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000514">STP22/YCL008C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000626">SYP1/YCR030C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002465">TGL2/YDR058C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004490">TSA1/YML028W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000739">VAC8/YEL013W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001709">VPS1/YKR001C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001856">YPT1/YFL038C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001465">YVH1/YIR026C</a></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#012910_1 SGD sends out its quarterly newsletter to colleagues designated as contacts in SGD. An <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/newsletters/2010-01.shtml">HTML version</a> of the newsletter is available. If you would like to receive this letter in the future please use the <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/cgi-bin/colleague/colleagueSearch">Colleague Submission/Update</a> form to let us know. </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#012510_1 Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: <a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005163#summaryParagraph">ALG9/YNL219C</a> and <a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000002827#summaryParagraph">RAD30/YDR419W</a> . http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#012510_2 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000367">DEM1/YBR163W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001393">FKH1/YIL131C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005012">FKH2/YNL068C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000238">HMT1/YBR034C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005927">NCR1/YPL006W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002827">RAD30/YDR419W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003824">RPA12/YJR063W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006214">RPA135/YPR010C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005868">RPA190/YOR341W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003684">RPA34/YJL148W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005867">RPA43/YOR340C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005192">RPA49/YNL248C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005736">RPB10/YOR210W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005365">RPB11/YOL005C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005677">RPB2/YOR151C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001283">RPB3/YIL021W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000358">RPB5/YBR154C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002812">RPB7/YDR404C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005750">RPB8/YOR224C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003038">RPB9/YGL070C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001185">RPC10/YHR143W-A</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005057">RPC19/YNL113W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006314">RPC40/YPR110C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002299">RPO21/YDL140C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006391">RPO26/YPR187W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000739">VAC8/YEL013W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002780">VPS74/YDR372C</a></td> <td><br /></td> <td><br /></td> <td><br /></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#012210_1 A large set of genetic interaction data from <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://www.sciencemag.org/cgi/content/abstract/327/5964/425">Costanzo et al., The Genetic Landscape of a Cell, Science 327: 425-431 (2010)</a> is available for <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://downloads.yeastgenome.org/systematic_results/genetic_interactions/Costanzo_2010_pmid_20093466">download</a> from SGD's Download Data Files page and will be available via the web interface in the future. This study presents 74,984 genetic interactions, comprising a functional map of the cell. Thanks to the authors for providing their data to SGD. http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#011810_1 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005620">ARF3/YOR094W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000332">ATG14/YBR128C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004769">ATG16/YMR159C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004627">CSI1/YMR025W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002586">CSN9/YDR179C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004118">DCN1/YLR128W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005432">EMI5/YOL071W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002180">GPD1/YDL022W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003149">GTS1/YGL181W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005385">LAG2/YOL025W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001803">MLP1/YKR095W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001333">PCI8/YIL071C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005736">RPB10/YOR210W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005365">RPB11/YOL005C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005677">RPB2/YOR151C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001283">RPB3/YIL021W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003676">RPB4/YJL140W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000358">RPB5/YBR154C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002812">RPB7/YDR404C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005750">RPB8/YOR224C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003038">RPB9/YGL070C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001185">RPC10/YHR143W-A</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002299">RPO21/YDL140C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006391">RPO26/YPR187W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002375">RRI1/YDL216C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005477">RRI2/YOL117W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000156">YEL1/YBL060W</a></td> <td><br /></td> <td><br /></td> <td><br /></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#011110_1 Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Summary Paragraphs Added During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000006139#summaryParagraph">SAR1/YPL218W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000005309#summaryParagraph">SEC12/YNR026C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000004198#summaryParagraph">SEC13/YLR208W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000006006#summaryParagraph">SEC16/YPL085W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000006385#summaryParagraph">SEC23/YPR181C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001371#summaryParagraph">SEC24/YIL109C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000002354#summaryParagraph">SEC31/YDL195W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000000663#summaryParagraph">SED4/YCR067C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000004994#summaryParagraph">SFB2/YNL049C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000001140#summaryParagraph">SFB3/YHR098C</a></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#011110_2 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001520">AIM26/YKL037W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001302">APQ12/YIL040W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003116">ARO2/YGL148W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003148">ATG1/YGL180W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003965">ATG10/YLL042C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006253">ATG11/YPR049C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000421">ATG12/YBR217W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006389">ATG13/YPR185W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004769">ATG16/YMR159C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004415">ATG17/YLR423C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005186">ATG2/YNL242W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002271">ATG20/YDL113C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006021">ATG21/YPL100W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006087">ATG29/YPL166W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005290">ATG3/YNR007C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004348">ATG33/YLR356W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005167">ATG4/YNL223W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006070">ATG5/YPL149W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001214">ATG7/YHR171W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000174">ATG8/YBL078C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002308">ATG9/YDL149W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003216">BRR6/YGL247W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001571">CAB3/YKL088W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005105">CBK1/YNL161W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002429">CIS1/YDR022C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005706">DCI1/YOR180C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003966">FPS1/YLL043W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003149">GTS1/YGL181W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000132612">ICR1</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001688">LOS1/YKL205W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004837">MRE11/YMR224C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002743">MSN5/YDR335W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005507">PEX11/YOL147C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000132614">PWR1</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005194">RAD50/YNL250W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002297">RGT2/YDL138W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006139">SAR1/YPL218W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005309">SEC12/YNR026C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006385">SEC23/YPR181C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000663">SED4/YCR067C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004994">SFB2/YNL049C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001140">SFB3/YHR098C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000001780">SIS2/YKR072C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002353">SNF3/YDL194W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003573">SNX4/YJL036W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002701">SSD1/YDR293C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006284">TEF1/YPR080W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000322">TEF2/YBR118W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000327">TFC1/YBR123C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000001">TFC3/YAL001C</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000003279">TFC4/YGR047C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000851">TPA1/YER049W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005580">VHS3/YOR054C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002777">XRS2/YDR369C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005613">YVC1/YOR087W</a></td> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004886">ZDS1/YMR273C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000004577">ZDS2/YML109W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000006350">YPR146C</a></td> <td><br /></td> <td><br /></td> </tr> </table> </description> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#010810_1 SGD curators periodically update the systematic sequence and its annotation. Information regarding changes can be found via the <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/chromosomeHistory.pl">Summary of Chromosome Sequence and Annotation Updates</a> and in the "<a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/locusHistory.pl">Locus History</a>" pages of affected features. Files on the SGD <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=http://downloads.yeastgenome.org/">FTP site</a> are updated weekly. <p> <b>Between 2010-01-04 and 2010-01-05</b>, two new ncRNAs were annotated on <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/chromosomeHistory.pl?chr=9#annot">Chromosome IX</a>, the annotation of ORF <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/locusHistory.pl?dbid=S000005606">DIA2/YOR080W</a> was changed, and the sequence of <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/chromosomeHistory.pl?chr=14#seq">Chromosome XIV</a> was changed, affecting the annotation of ORF <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=noteworthy&url=/cgi-bin/locusHistory.pl?dbid=S000005027">SAL1/YNL083W</a>. http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#010810_2 The following changes will be made to files available for download from SGD in February 2010:<p> <ul> <li>All files available in <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://downloads.yeastgenome.org/gene_registry/">http://downloads.yeastgenome.org/gene_registry/</a> will be obsoleted. This means that they will no longer be available to download.<p> <li>The <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://downloads.yeastgenome.org/chromosomal_feature/annotation_change.tab">annotation_change.tab</a> file will also be obsoleted. This means this file will no longer be available to download. For information regarding ORF qualifiers (Verified, Uncharacterized, Dubious), please use the already available <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://downloads.yeastgenome.org/chromosomal_feature/SGD_features.tab">SGD_features.tab</a> file. Information regarding deleted or merged chromosomal features can be found in the new deleted_merged_features.tab file (described below).<p> <li>A new file called deleted_merged_features.tab will be available from <a href="http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=http://downloads.yeastgenome.org/chromosomal_feature/">http://downloads.yeastgenome.org/chromosomal_feature/</a>. This file will list chromosomal features that have been deleted or merged. The format of the file is identical to the annotation_change.tab file. </ul> http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#010410_1 Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: <a href="http://www.yeastgenome.org/cgi-bin/locus.fpl?dbid=S000004103#summaryParagraph">HOG1/YLR113W</a> . http://www.yeastgenome.org/cgi-bin/redirect.pl?source=rssfeed&url=/whats_new.shtml#010410_2 During the past week, the GO annotations have been updated for the following features: <p /> <table border="1"> <tr> <th bgcolor="navajowhite" width="80%" colspan="5"> List of Features with GO Annotations Updated During the Past Week </th> </tr> <tr> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005706">DCI1/YOR180C</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002297">RGT2/YDL138W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000002353">SNF3/YDL194W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000000851">TPA1/YER049W</a></td> <td><a href="http://www.yeastgenome.org/cgi-bin/GO/goAnnotation.pl?dbid=S000005613">YVC1/YOR087W</a></td> </tr> </table> </description>