Genome-wide Analysis papers Help

Citation Topic(s)
Paget CM, et al.  (2014) Environmental systems biology of cold-tolerant phenotype in Saccharomyces species adapted to grow at different temperatures. Mol Ecol 23(21):5241-57 Omics
Pamblanco M, et al.  (2014) Unveiling novel interactions of histone chaperone Asf1 linked to TREX-2 factors Sus1 and Thp1. Nucleus 5(3):247-59 Omics
Pang YL, et al.  (2014) Diverse cell stresses induce unique patterns of tRNA up- and down-regulation: tRNA-seq for quantifying changes in tRNA copy number. Nucleic Acids Res 42(22):e170 Omics
Park D, et al.  (2014) Simultaneous mapping of transcript ends at single-nucleotide resolution and identification of widespread promoter-associated non-coding RNA governed by TATA elements. Nucleic Acids Res 42(6):3736-49 Omics
Park EH and Kim MD  (2014) Genome-wide Screening of Saccharomyces cerevisiae Genes Regulated by Vanillin. J Microbiol Biotechnol () Omics
Park SK, et al.  (2014) Nuclear FKBPs, Fpr3 and Fpr4 affect genome-wide genes transcription. Mol Genet Genomics 289(2):125-36 Omics
Parreiras LS, et al.  (2014) Engineering and Two-Stage Evolution of a Lignocellulosic Hydrolysate-Tolerant Saccharomyces cerevisiae Strain for Anaerobic Fermentation of Xylose from AFEX Pretreated Corn Stover. PLoS One 9(9):e107499 Omics
Parts L, et al.  (2014) Heritability and genetic basis of protein level variation in an outbred population. Genome Res 24(8):1363-70 Omics
Patel RY and Stormo GD  (2014) Discriminative motif optimization based on perceptron training. Bioinformatics 30(7):941-8 Omics
Pereira FB, et al.  (2014) Genome-wide screening of Saccharomyces cerevisiae genes required to foster tolerance towards industrial wheat straw hydrolysates. J Ind Microbiol Biotechnol 41(12):1753-61 Omics
Pimentel C, et al.  (2014) Yap1 mediates tolerance to cobalt toxicity in the yeast Saccharomyces cerevisiae. Biochim Biophys Acta 1840(6):1977-86 Omics
Pincus D, et al.  (2014) Delayed Ras/PKA signaling augments the unfolded protein response. Proc Natl Acad Sci U S A 111(41):14800-5 Omics
Pirmoradian M, et al.  (2014) Membrane-assisted isoelectric focusing device as a micropreparative fractionator for two-dimensional shotgun proteomics. Anal Chem 86(12):5728-32 Omics
Pitkanen E, et al.  (2014) Comparative genome-scale reconstruction of gapless metabolic networks for present and ancestral species. PLoS Comput Biol 10(2):e1003465 Omics
Prescott TA, et al.  (2014) A yeast chemical genetics approach identifies the compound 3,4,5-trimethoxybenzyl isothiocyanate as a calcineurin inhibitor. FEBS Lett 588(3):455-8 Omics
Prescott TA, et al.  (2014) The haploinsufficiency profile of a-hederin suggests a caspofungin-like antifungal mode of action. Phytochemistry 101():116-20 Omics
Qin LX, et al.  (2014) Finding gene clusters for a replicated time course study. BMC Res Notes 7(1):60 Omics
Rabier CE, et al.  (2014) Detecting and locating whole genome duplications on a phylogeny: a probabilistic approach. Mol Biol Evol 31(3):750-62 Omics
Ramachandran S, et al.  (2014) Asymmetric nucleosomes flank promoters in the budding yeast genome. Genome Res () Omics
Reich LL, et al.  (2014) SORTCERY-A High-Throughput Method to Affinity Rank Peptide Ligands. J Mol Biol () Omics
Reiner-Benaim A, et al.  (2014) Scan statistics analysis for detection of introns in time-course tiling array data. Stat Appl Genet Mol Biol 13(2):173-90 Omics
Renvoise M, et al.  (2014) Quantitative variations of the mitochondrial proteome and phosphoproteome during fermentative and respiratory growth in Saccharomyces cerevisiae. J Proteomics 106():140-50 Omics
Reyes LH, et al.  (2014) Improving carotenoids production in yeast via adaptive laboratory evolution. Metab Eng 21():26-33 Omics
Rhoads TW, et al.  (2014) Neutron-encoded mass signatures for quantitative top-down proteomics. Anal Chem 86(5):2314-9 Omics
Rochette S, et al.  (2014) Modulation of the yeast protein interactome in response to DNA damage. J Proteomics 100():25-36 Omics
Rodkaer SV, et al.  (2014) Quantitative proteomics identifies unanticipated regulators of nitrogen- and glucose starvation. Mol Biosyst 10(8):2176-88 Omics
Rodriguez J, et al.  (2014) Genome-Wide Analysis of Nucleosome Positions, Occupancy, and Accessibility in Yeast: Nucleosome Mapping, High-Resolution Histone ChIP, and NCAM. Curr Protoc Mol Biol 108():21.28.1-21.28.16 Omics
Rodriguez-Lombardero S, et al.  (2014) Proteomic Analyses Reveal that Sky1 Modulates Apoptosis and Mitophagy in Saccharomyces cerevisiae Cells Exposed to Cisplatin. Int J Mol Sci 15(7):12573-90 Omics
Rodriguez-Lombardero S, et al.  (2014) Sky1 regulates the expression of sulfur metabolism genes in response to cisplatin. Microbiology 160(Pt 7):1357-68 Omics
Romagnoli G, et al.  (2014) Deletion of the Saccharomyces cerevisiae ARO8 gene, encoding an aromatic amino acid transaminase, enhances phenylethanol production from glucose. Yeast () Omics