Genome-wide Analysis papers Help

Citation Topic(s)
Schwartz S, et al.  (2014) Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA. Cell 159(1):148-162 Omics
Serero A, et al.  (2014) Mutational landscape of yeast mutator strains. Proc Natl Acad Sci U S A 111(5):1897-902 Omics
Shaham G and Tuller T  (2014) Most associations between transcript features and gene expression are monotonic. Mol Biosyst 10(6):1426-40 Omics
Shen L, et al.  (2014) Response of Saccharomyces cerevisiae to the Stimulation of Lipopolysaccharide. PLoS One 9(8):e104428 Omics
Singh PK and Shakya M  (2014) Comparative evolutionary analysis of cell cycle proteins networks in fission and budding yeast. Cell Biochem Biophys 70(2):1167-75 Omics
Slavov N, et al.  (2014) Constant growth rate can be supported by decreasing energy flux and increasing aerobic glycolysis. Cell Rep 7(3):705-14 Omics
Smardon AM, et al.  (2014) The RAVE complex is an isoform-specific V-ATPase assembly factor in yeast. Mol Biol Cell 25(3):356-67 Omics
Smith JE, et al.  (2014) Translation of Small Open Reading Frames within Unannotated RNA Transcripts in Saccharomyces cerevisiae. Cell Rep 7(6):1858-1866 Omics
Song J, et al.  (2014) Essential Genetic Interactors of SIR2 Required for Spatial Sequestration and Asymmetrical Inheritance of Protein Aggregates. PLoS Genet 10(7):e1004539 Omics
Song Q, et al.  (2014) Pooled segregant sequencing reveals genetic determinants of yeast pseudohyphal growth. PLoS Genet 10(8):e1004570 Omics
Song W, et al.  (2014) Genome-wide high-resolution mapping of chromosome fragile sites in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 111(21):E2210-8 Omics
Sorenson MR and Stevens SW  (2014) Rapid identification of mRNA processing defects with a novel single-cell yeast reporter. RNA 20(5):732-45 Omics
Soriano I, et al.  (2014) Different nucleosomal architectures at early and late replicating origins in Saccharomyces cerevisiae. BMC Genomics 15(1):791 Omics
Soste M, et al.  (2014) A sentinel protein assay for simultaneously quantifying cellular processes. Nat Methods 11(10):1045-8 Omics
Sridhar A, et al.  (2014) At short telomeres tel1 directs early replication and phosphorylates rif1. PLoS Genet 10(10):e1004691 Omics
Stirling PC, et al.  (2014) Genome Destabilizing Mutator Alleles Drive Specific Mutational Trajectories in Saccharomyces cerevisiae. Genetics 196(2):403-12 Omics
Stovicek V, et al.  (2014) Global changes in gene expression associated with phenotypic switching of wild yeast. BMC Genomics 15(1):136 Omics
Suhandynata R, et al.  (2014) A Method for Sporulating Budding Yeast Cells that Allows for Unbiased Identification of Kinase Substrates Using Stable Isotope Labeling by Amino Acids in Cell Culture. G3 (Bethesda) () Omics
Suzuki K, et al.  (2014) Proteomic Profiling of Autophagosome Cargo in Saccharomyces cerevisiae. PLoS One 9(3):e91651 Omics
Swamy KB, et al.  (2014) Examining the condition-specific antisense transcription in S. cerevisiae and S. paradoxus. BMC Genomics 15():521 Omics
Szamecz B, et al.  (2014) The genomic landscape of compensatory evolution. PLoS Biol 12(8):e1001935 Omics
Talkish J, et al.  (2014) Mod-seq: high-throughput sequencing for chemical probing of RNA structure. RNA 20(5):713-20 Omics
Tamari Z, et al.  (2014) Coordination of gene expression and growth-rate in natural populations of budding yeast. PLoS One 9(2):e88801 Omics
Tarasov K, et al.  (2014) High-content screening of yeast mutant libraries by shotgun lipidomics. Mol Biosyst 10(6):1364-76 Omics
Thurtle DM and Rine J  (2014) The molecular topography of silenced chromatin in Saccharomyces cerevisiae. Genes Dev 28(3):245-58 Omics
Tran DT, et al.  (2014) Stable Isotope Labeling with Amino Acids in Cell Culture (SILAC)-Based Strategy for Proteome-Wide Thermodynamic Analysis of Protein-Ligand Binding Interactions. Mol Cell Proteomics 13(7):1800-13 Omics
Trembley MA, et al.  (2014) The yeast 14-3-3 proteins Bmh1 and Bmh2 differentially regulate rapamycin-mediated transcription. Biosci Rep () Omics
Treu L, et al.  (2014) The impact of genomic variability on gene expression in environmental Saccharomyces cerevisiae strains. Environ Microbiol 16(5):1378-97 Omics
Tripathi H, et al.  (2014) Genomic Identification of Potential Targets Unique to Candida albicans for the Discovery of Antifungal Agents. Curr Drug Targets 15(1):136-49 Omics
Tronchoni J, et al.  (2014) Transcriptomics of cryophilic Saccharomyces kudriavzevii reveals the key role of gene translation efficiency in cold stress adaptations. BMC Genomics 15(1):432 Omics