Genome-wide Analysis papers Help

Citation Topic(s)
Wanichthanarak K, et al.  (2014) yStreX: yeast stress expression database. Database (Oxford) 2014() Omics
Webb S, et al.  (2014) PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast. Genome Biol 15(1):R8 Omics
Will T and Helms V  (2014) Identifying transcription factor complexes and their roles. Bioinformatics 30(17):i415-i421 Omics
Williams CC, et al.  (2014) Targeting and plasticity of mitochondrial proteins revealed by proximity-specific ribosome profiling. Science 346(6210):748-51 Omics
Winter G, et al.  (2014) Formation of hydrogen sulfide from cysteine in Saccharomyces cerevisiae BY4742: genome wide screen reveals a central role of the vacuole. PLoS One 9(12):e113869 Omics
Wohlbach DJ, et al.  (2014) Comparative genomics of Saccharomyces cerevisiae natural isolates for bioenergy production. Genome Biol Evol 6(9):2557-66 Omics
Wu J and Hopper AK  (2014) Healing for destruction: tRNA intron degradation in yeast is a two-step cytoplasmic process catalyzed by tRNA ligase Rlg1 and 5'-to-3' exonuclease Xrn1. Genes Dev 28(14):1556-61 Omics
Xue-Franzen Y  (2014) Does gene length play a role? - Transient regulation of Gcn5 histone acetyltransferase under stress conditions. Genom Data 2():293-5 Omics
Yahya G, et al.  (2014) A whi7-anchored loop controls the g1 cdk-cyclin complex at start. Mol Cell 53(1):115-26 Omics
Yamane-Sando Y, et al.  (2014) Fpk1/2 kinases regulate cellular sphingoid long-chain base abundance and alter cellular resistance to LCB elevation or depletion. Microbiologyopen 3(2):196-212 Omics
Yang L, et al.  (2014) Characterization of TATA-containing genes and TATA-less genes in S. cerevisiae by network topologies and biological properties. Genomics 104(6 Pt B):562-71 Omics
Yang X, et al.  (2014) Stress granule-defective mutants deregulate stress responsive transcripts. PLoS Genet 10(11):e1004763 Omics
Yang Y, et al.  (2014) Global signatures of protein binding on structured RNAs in Saccharomyces cerevisiae. Sci China Life Sci 57(1):22-35 Omics
Yin Y and Petes TD  (2014) The Role of Exo1p Exonuclease in DNA End Resection to Generate Gene Conversion Tracts in Saccharomyces cerevisiae. Genetics 197(4):1097-109 Omics
Yofe I, et al.  (2014) Accurate, Model-Based Tuning of Synthetic Gene Expression Using Introns in S. cerevisiae. PLoS Genet 10(6):e1004407 Omics
Yu C, et al.  (2014) Strand-Specific Analysis Shows Protein Binding at Replication Forks and PCNA Unloading from Lagging Strands when Forks Stall. Mol Cell 56(4):551-63 Omics
Yucel EB, et al.  (2014) The impact of medium acidity on the chronological life span of Saccharomyces cerevisiae - lipids, signaling cascades, mitochondrial and vacuolar functions. FEBS J 281(4):1281-303 Omics
Zapata J, et al.  (2014) PP2ARts1 is a master regulator of pathways that control cell size. J Cell Biol 204(3):359-76 Omics
Zeevi D, et al.  (2014) Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters. Genome Res 24(12):1991-9 Omics
Zeigler RD and Cohen BA  (2014) Discrimination between thermodynamic models of cis-regulation using transcription factor occupancy data. Nucleic Acids Res 42(4):2224-34 Omics
Zhang H and Singh KK  (2014) Global genetic determinants of mitochondrial DNA copy number. PLoS One 9(8):e105242 Omics
Zhao S, et al.  (2014) Comparative proteomic analysis of Saccharomyces cerevisiae under different nitrogen sources. J Proteomics 101():102-12 Omics
Zhou Q, et al.  (2014) Genomic and transcriptome analyses reveal that MAPK- and phosphatidylinositol-signaling pathways mediate tolerance to 5-hydroxymethyl-2-furaldehyde for industrial yeast Saccharomyces cerevisiae. Sci Rep 4():6556 Omics
Zid BM and O'Shea EK  (2014) Promoter sequences direct cytoplasmic localization and translation of mRNAs during starvation in yeast. Nature 514(7520):117-21 Omics
Zuleta IA, et al.  (2014) Dynamic characterization of growth and gene expression using high-throughput automated flow cytometry. Nat Methods 11(4):443-8 Omics
da Silveira Dos Santos AX, et al.  (2014) Systematic lipidomic analysis of yeast protein kinase and phosphatase mutants reveals novel insights into regulation of lipid homeostasis. Mol Biol Cell 25(20):3234-46 Omics
de Boer CG and Hughes TR  (2014) Poly-dA:dT Tracts Form an In Vivo Nucleosomal Turnstile. PLoS One 9(10):e110479 Omics
de Boer CG, et al.  (2014) A unified model for yeast transcript definition. Genome Res 24(1):154-66 Omics
van der Felden J, et al.  (2014) The Transcription Factors Tec1 and Ste12 Interact with Coregulators Msa1 and Msa2 To Activate Adhesion and Multicellular Development. Mol Cell Biol 34(12):2283-2293 Omics
Abrusan G, et al.  (2013) Turning gold into 'junk': transposable elements utilize central proteins of cellular networks. Nucleic Acids Res 41(5):3190-200 Omics