References Associated with Literature Topic: Omics Help

Andrisic L, et al.  (2015) Transcriptional and antioxidative responses to endogenous polyunsaturated fatty acid accumulation in yeast. Mol Cell Biochem 399(1-2):27-37
Babu M  (2015) Yeast mitochondrial protein-protein interactions reveal diverse complexes and disease-relevant functional relationships. J Proteome Res 14(2):1220-37
Bauer CR, et al.  (2015) Essential gene disruptions reveal complex relationships between phenotypic robustness, pleiotropy, and fitness. Mol Syst Biol 11(1):773
Becker E, et al.  (2015) Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and development. J Proteomics 119C():30-44
Belsky JA, et al.  (2015) Genome-wide chromatin footprinting reveals changes in replication origin architecture induced by pre-RC assembly. Genes Dev 29(2):212-24
Birkedal U, et al.  (2015) Profiling of ribose methylations in RNA by high-throughput sequencing. Angew Chem Int Ed Engl 54(2):451-5
Carvalho-Netto OV, et al.  (2015) Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production. Microb Cell Fact 14(1):13
Chabbert CD, et al.  (2015) A high-throughput ChIP-Seq for large-scale chromatin studies. Mol Syst Biol 11(1):777
Chen G, et al.  (2015) Targeting the adaptability of heterogeneous aneuploids. Cell 160(4):771-84
Chujo M, et al.  (2015) Acquisition of the Ability To Assimilate Mannitol by Saccharomyces cerevisiae through Dysfunction of the General Corepressor Tup1-Cyc8. Appl Environ Microbiol 81(1):9-16
Claesen J and Burzykowski T  (2015) A hidden Markov-model for gene mapping based on whole-genome next generation sequencing data. Stat Appl Genet Mol Biol 14(1):21-34
Clausen AR, et al.  (2015) Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation. Nat Struct Mol Biol ()
Costello J, et al.  (2015) Global mRNA selection mechanisms for translation initiation. Genome Biol 16(1):10
Deed RC, et al.  (2015) Transcriptional response of Saccharomyces cerevisiae to low temperature during wine fermentation. Antonie Van Leeuwenhoek ()
Dhungel N, et al.  (2015) Parkinson's disease genes VPS35 and EIF4G1 interact genetically and converge on a-synuclein. Neuron 85(1):76-87
Downey M, et al.  (2015) Acetylome profiling reveals overlap in the regulation of diverse processes by sirtuins, gcn5, and esa1. Mol Cell Proteomics 14(1):162-76
Escalante-Chong R, et al.  (2015) Galactose metabolic genes in yeast respond to a ratio of galactose and glucose. Proc Natl Acad Sci U S A 112(5):1636-41
Fox MJ, et al.  (2015) The Exosome Component Rrp6 Is Required for RNA Polymerase II Termination at Specific Targets of the Nrd1-Nab3 Pathway. PLoS Genet 10(2):e1004999
Fu J, et al.  (2015) The Yeast BDF1 Regulates Endocytosis via LSP1 Under Salt Stress. Curr Microbiol ()
Gagnon J, et al.  (2015) Transcriptome Wide Annotation of Eukaryotic RNase III Reactivity and Degradation Signals. PLoS Genet 11(2):e1005000
Hartman JL, et al.  (2015) Yeast Phenomics: An Experimental Approach for Modeling Gene Interaction Networks that Buffer Disease. Genes (Basel) 6(1):24-45
Huber EM, et al.  (2015) Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure 23(2):407-17
Ibstedt S, et al.  (2015) Concerted evolution of life stage performances signals recent selection on yeast nitrogen use. Mol Biol Evol 32(1):153-61
Jarnuczak A, et al.  (2015) Quantitative proteomics and network analysis of SSA1 and SSB1 deletion mutants reveals robustness of chaperone HSP70 network in Saccharomyces cerevisiae. Proteomics ()
Jayakody LN, et al.  (2015) SUMO expression shortens the lag phase of Saccharomyces cerevisiae yeast growth caused by complex interactive effects of major mixed fermentation inhibitors found in hot-compressed water-treated lignocellulosic hydrolysate. Appl Microbiol Biotechnol 99(1):501-15
Jordan-Pla A, et al.  (2015) Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle. Nucleic Acids Res 43(2):787-802
Kang YN, et al.  (2015) Genome-wide profiling of untranslated regions by paired-end ditag sequencing reveals unexpected transcriptome complexity in yeast. Mol Genet Genomics 290(1):217-24
Kim SR, et al.  (2015) Deletion of PHO13, Encoding Haloacid Dehalogenase Type IIA Phosphatase, Results in Upregulation of the Pentose Phosphate Pathway in Saccharomyces cerevisiae. Appl Environ Microbiol 81(5):1601-9
Kitzman JO, et al.  (2015) Massively parallel single-amino-acid mutagenesis. Nat Methods 12(3):203-6
Koh KD, et al.  (2015) Ribose-seq: global mapping of ribonucleotides embedded in genomic DNA. Nat Methods 12(3):251-7