References Associated with Literature Topic: Large-scale protein interaction Help

Babu M, et al.  (2012) Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae. Nature 489(7417):585-9
Baker M  (2012) Proteomics: The interaction map. Nature 484(7393):271-5
Jackson CA, et al.  (2012) Proteomic analysis of interactors for yeast protein arginine methyltransferase Hmt1 reveals novel substrate and insights into additional biological roles. Proteomics 12(22):3304-14
Musso G, et al.  (2012) Characterization and evolutionary analysis of protein-protein interaction networks. Methods Mol Biol 856():363-80
Peterson GJ, et al.  (2012) Simulated evolution of protein-protein interaction networks with realistic topology. PLoS One 7(6):e39052
Schlecht U, et al.  (2012) Multiplex assay for condition-dependent changes in protein-protein interactions. Proc Natl Acad Sci U S A 109(23):9213-8
Bloom J, et al.  (2011) Global analysis of cdc14 phosphatase reveals diverse roles in mitotic processes. J Biol Chem 286(7):5434-45
Echtenkamp FJ, et al.  (2011) Global Functional Map of the p23 Molecular Chaperone Reveals an Extensive Cellular Network. Mol Cell 43(2):229-41
Fasolo J, et al.  (2011) Diverse protein kinase interactions identified by protein microarrays reveal novel connections between cellular processes. Genes Dev 25(7):767-78
Hruby A, et al.  (2011) A constraint network of interactions: protein-protein interaction analysis of the yeast type II phosphatase Ptc1p and its adaptor protein Nbp2p. J Cell Sci 124(Pt 1):35-46
Musso G, et al.  (2011) Filtering and interpreting large-scale experimental protein-protein interaction data. Methods Mol Biol 781():295-309
Pu J, et al.  (2011) Interactomic study on interaction between lipid droplets and mitochondria. Protein Cell 2(6):487-96
Ren L, et al.  (2011) Systematic Two-Hybrid and Comparative Proteomic Analyses Reveal Novel Yeast Pre-mRNA Splicing Factors Connected to Prp19. PLoS One 6(2):e16719
Tian R, et al.  (2011) Development of a multiplexed microfluidic proteomic reactor and its application for studying protein-protein interactions. Anal Chem 83(11):4095-102
Benschop JJ, et al.  (2010) A Consensus of Core Protein Complex Compositions for Saccharomyces cerevisiae. Mol Cell 38(6):916-928
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Chakraborty S, et al.  (2010) Protein complex forming ability is favored over the features of interacting partners in determining the evolutionary rates of proteins in the yeast protein-protein interaction networks. BMC Syst Biol 4():155
Dagkessamanskaia A, et al.  (2010) Functional dissection of an intrinsically disordered protein: understanding the roles of different domains of Knr4 protein in protein-protein interactions. Protein Sci 19(7):1376-85
Gupta S, et al.  (2010) Unraveling the conundrum of seemingly discordant protein-protein interaction datasets. Conf Proc IEEE Eng Med Biol Soc 1():783-6
Hase T, et al.  (2010) Difference in gene duplicability may explain the difference in overall structure of protein-protein interaction networks among eukaryotes. BMC Evol Biol 10(1):358
Ikeuchi A, et al.  (2010) A method for reverse interactome analysis: High-resolution mapping of interdomain interaction network in Dam1 complex and its specific disorganization based on the interaction domain expression. Biotechnol Prog 26(4):945-53
Kaake RM, et al.  (2010) Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy. J Proteome Res 9(4):2016-29
Kim ED, et al.  (2010) Predicting direct protein interactions from affinity purification mass spectrometry data. Algorithms Mol Biol 5(1):34
Mendu V, et al.  (2010) Cpr1 cyclophilin and Ess1 parvulin prolyl isomerases interact with the tombusvirus replication protein and inhibit viral replication in yeast model host. Virology 406(2):342-51
Chua HN, et al.  (2009) A probabilistic graph-theoretic approach to integrate multiple predictions for the protein-protein subnetwork prediction challenge. Ann N Y Acad Sci 1158:224-33
Gong Y, et al.  (2009) An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell. Mol Syst Biol 5:275
Halbeisen RE and Gerber AP  (2009) Stress-dependent coordination of transcriptome and translatome in yeast. PLoS Biol 7(5):e1000105
Joo YJ, et al.  (2009) Determination of the core promoter regions of the Saccharomyces cerevisiae RPS3 gene. Biochim Biophys Acta 1789(11-12):741-50
Kahali B, et al.  (2009) Exploring the evolutionary rate differences of party hub and date hub proteins in Saccharomyces cerevisiae protein-protein interaction network. Gene 429(1-2):18-22
Lambert JP, et al.  (2009) A novel proteomics approach for the discovery of chromatin-associated protein networks. Mol Cell Proteomics 8(4):870-82