Alignment table
Needleman Wunsch alignment of:
- S. cerevisiae gene sgs1 (YMR109C)
- Human Werner syndrome gene. GenBank: L76937
(Yeast sequence on top).
BLAST P-value: 3.1e-50
Percent Similarity (|+|): 33.9 Percent Identity (|): 23.9
151 LGSRNNNKSVIDNSSIGKQLENDIKLEVIRLQGSLIMALKEQSK..LLLQ 198
|| ||| | | ||| | |
1 ....................MSEKKLETTAQQRKCPEWMNVQNKRCAVEE 30
199 KCSIIESTSLSEDAKRLQLSRDI..RPQLSNMSIRIDSLEKEIIKAKKDG 246
| | | | || || | | || | | | | |
31 RKACVRKSVFEDDLPFLEFTGSIVYSYDASDCSFLSEDISMSLSDGDVVG 80
247 MSKDQSKGRSQVSSQDDNIISSILPSPLEYNTSSRNSNLTSTTATTVTKA 296
| || || | | | || | |
81 FDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLEN 130
297 LAITGAKQNITNNTGKNSNN.DSNNDDLIQVLD.DEDDIDCDPPVILKEG 344
|| | | | | | | | ||| | | | |
131 KAVKKAGVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTETWSLNSL 180
345 APHSPAFPHLHMTS...........EEQDELTRRRNMRSREPVNYRIPDR 383
| | | | || | | | |
181 VKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNLEIL 230
384 DDPFD.YVMGKSLRDDYPDVEREEDELTMEAEDDA.HSSYMTTRDEEKEE 431
|| | | | || || || | | | | | || |
231 DDTVQRFAINKEEEILLSDMNKQLTSISEEVMDLAKHLPHAFSKLENPRR 280
432 NELLNQSDFDFVVNDDLDPTQDTDYHDNMDVSANIQESSQEGDTRSTITL 481
|| | | | | || | | || | | | |
281 VSILLKDISENLYSLRRMIIGSTNIETELRPSNNLNLLSFEDSTTGGVQQ 330
482 SQNKNVQVILS......SPTAQSVPSNGQNQIGVEHIDLLEDDLEKDAIL 525
| | |||| || | | | || || | | |
331 KQIREHEVLIHVEDETWDPTLDHLAKHDGEDVLGNKVERKEDGFE.DGVE 379
526 DDSMSFSFGR...QHMPMSHSDLELIDSE...........KENEDFEEDN 561
|| | | | | || |||||| | | | ||
380 DNKLKENMERACLMSLDITEHELQILEQQSQEEYLSDIAYKSTEHLSPND 429
562 NNNGIEYL..SDSDLE....RFDEERENRTQVADIQELDNDLKIITERKL 605
| | || || ||| | || | | | | |||| | |
430 NENDTSYVIESDEDLEMEMLKHLSPNDNENDTSYVIESDEDLEMEMLKSL 479
606 TGDNEHPPPSWSPKIKREKSSVSQKDEEDDFDDDFSLSDIVSKSNLSSKT 655
| | | | || |||| ||| || |
480 ENLNSGTVEPTHSKCLKMERNLGLPTKEEEEDDENEANEGEEDDDKDFLW 529
656 NGPTYPWSDEVLYRLHEVFKLPGFRPNQLEAVNATL.QGKDVFVLMPTGG 704
| ||| | | | ||| | | ||| | | || || ||
530 PAP....NEEQVTCLKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGY 575
705 GKSLCYQLPAVVKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSS 754
||||||| | | || |||||||||||||| | || |
576 GKSLCFQYPPVY.VGK...IGLVISPLISLMEDQVLQLKMSNIPACFL.. 619
755 RGTAEQRRQTFNLFINGLLDLVYISPEMISASEQCKRAISRLYADGKLAR 804
|||| || | | ||||||| | | | || || |
620 .GSAQSENVLTDIKL.GKYRIVYVTPEYCSGN...MGLLQQLEADIGITL 664
805 IVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDI 854
| |||||||| |||||| |||| | | ||||||||||| || ||
665 IAVDEAHCISEWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDI 714
855 IHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTI.....FEICDAVKSRFK 899
| | || | ||| ||| || ||| | | | | | ||
715 VRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSSHWEFE 764
900 NQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQAD 949
| |||| ||| || | |||| | | ||||| | | | |
765 GPT.IIYCPSRKMTQQVTGELRKLNLSCGTYHAGMSFSTRKDIHHRFVRD 813
950 EIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSY 999
||| | ||||||||||| ||| | || || || |||| ||||||| |
814 EIQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSS 863
1000 CITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRR 1049
| || || | || | || | | || | | | |||
864 CHVLWAPADINLNRHLLTEIRN...EKFRLYKLKMMAKMEKYLHSSRCRR 910
1050 KLVLSYFNEDFDSKL......CHKNCDNCRNSA....NVINEERDVTEPA 1089
||||||| | | | |||||| || | | |
911 QIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLDHCYSMDDSEDTSWDFG 960
1090 KKIVKLVESIQ..NERVTIIYCQDVFKGSRSSKIVQANHDTLEEHGIGKS 1137
| ||| || || | ||| | || | | ||
961 PQAFKLLSAVDILGEKFGIGLPILFLRGSNSQRLAD.QYRRHSLFGTGKD 1009
1138 MQKSEIERIFFHLITIRVLQEYSIMNNSGFASSYVKVGPN........AK 1179
|| | ||| | | | | | | | | ||
1010 QTESWWKAFSRQLITEGFLVEVSRYNKFMKICALTKKGRNWLHKANTESQ 1059
1180 KLLTGKMEIKMQFTISAPNSRPSTSSSFQANEDNIPVIAQKSTTIGGNVA 1229
|| | |||| || | | | ||| | || ||
1060 SLILQANEELCPKKFLLPSSKTVSSGTKEHCYNQVPV..ELSTEKKSNLE 1107
1230 ANPPRFISAKEHLRSYTYGGSTMGSSHPITLKNTSDLRSTQELNNLRMTY 1279
| | | | | || | | || | |
1108 KLYSYKPCDKISSGSNISKKSIMVQSPEKAYSSSQPVISAQEQETQIVLY 1157
1280 ERLRELSLNLGNRMVPPVGNFMPDSILKKMAAILPMNDSAFATLGTVEDK 1329
|| | ||| | | || || | | | | |
1158 GKLVEARQKHANKMDVPPAILATNKILVDMAKMRPTTVENVKRIDGVSEG 1207
1330 YRRRFKYFKATIADLSKKRSSEDHEKYDTILNDEFVNRAAASSNGIAQST 1379
| | | | | | | | | | | |
1208 KAAMLAPLLEVIKHFCQTNSVQT.DLFSSTKPQEEQKTSLVAKNKIC... 1253
1380 GTKSKFFGANLNEAKENEQIINQIRQSQLPKNTTSSKSGTRSISKSSKKS 1429
| || | || | | | |||| | ||||
1254 .TLSQSMAITYSLFQEKKMPLKSIAESRILPLMTIGMHLSQAVKAGCPLD 1302
1430 ANGRRGFRNYRGHYRGRK................................ 1447
| |
1303 LE.RAGLTPEVQKIIADVIRNPPVNSDMSKISLIRMLVPENIDTYLIHMA 1351