This page displays data from Segal et al and was kindly provided to SGD by Eran Segal.

Module 19 (41 Genes) - Stress Analysis
Jump to: Significant GO annotations | Significant Motif Binding Sites.
Predicted Regulatory Module
The control program is a set of gene products predicted to regulate the cluster of genes below. The prediction is based on the relationship between the expression of the regulator and the expression of genes in the cluster as described in Segal et al. In several instances, there is direct experimental evidence to corroborate the predicted function of the regulators. In this view, the regulators (circled gene products) are in a hierarchy according to their effects on gene expression in the experiments directly below them.


Jump to: Predicted Control Program | Significant Motif Binding Sites.
 
Significant GO Annotations
This table lists, in order of significance, all GO annotations enriched in this cluster at a pvalue below 0.01. For each significant GO annotation, this table displays the following statistics: the number of genes in the cluster with the annotation (Hits), the percentage of genes in the cluster with the annotation (Hits (%)), the total number of genes in the entire dataset with the annotation (Total) and the pvalue of the annotation enrichment.
GO Term Ontology Hits Hits (%) Total Pvalue
macromolecule biosynthesis Biological Process 8 19.51 86 7.11166e-05
ergosterol biosynthesis Biological Process 4 9.75 16 0.000119135
cell wall Cellular Component 6 14.63 51 0.000173913
external encapsulating structure Cellular Component 6 14.63 51 0.000173913
steroid biosynthesis Biological Process 4 9.75 19 0.000241863
sterol biosynthesis Biological Process 4 9.75 19 0.000241863
sterol metabolism Biological Process 4 9.75 20 0.00029754
protein biosynthesis Biological Process 8 19.51 107 0.000320729
steroid metabolism Biological Process 4 9.75 21 0.000361725
signal transducer activity Molecular Function 8 19.51 109 0.000362927
mannoprotein metabolism Biological Process 6 14.63 61 0.00045995
mannoprotein biosynthesis Biological Process 6 14.63 61 0.00045995
plasma membrane Cellular Component 10 24.39 175 0.000463253
alcohol metabolism Biological Process 4 9.75 24 0.000612147
glucosidase activity Molecular Function 3 7.31 11 0.000710062
conjugation with cellular fusion Biological Process 5 12.19 44 0.000737883
response to pheromone during conjugation with cellular fusion Biological Process 4 9.75 29 0.00126297
endoplasmic reticulum Cellular Component 6 14.63 75 0.00134413
apicolateral plasma membrane Cellular Component 5 12.19 51 0.00142974
plasmodesma Cellular Component 5 12.19 51 0.00142974
cell junction Cellular Component 5 12.19 51 0.00142974
intercellular junction Cellular Component 5 12.19 51 0.00142974
plasmodesmatal desmotubule Cellular Component 5 12.19 51 0.00142974
hydrolase activity\, hydrolyzing O-glycosyl compounds Molecular Function 3 7.31 17 0.00265268
hydrolase activity\, acting on glycosyl bonds Molecular Function 3 7.31 19 0.00365817
physiological processes Biological Process 35 85.36 1589 0.00531745
response to pheromone Biological Process 7 17.07 148 0.00911821
sensory perception Biological Process 7 17.07 149 0.0094203
chemosensory perception Biological Process 7 17.07 150 0.00972914


Jump to: Predicted Control Program | Significant GO Annotations.
 
Significant Motif Binding Sites
This table lists, in order of significance, all motif binding sites enriched in this cluster at a pvalue below 0.01. For each significant motif binding site, the following statistics are displayed: the number of genes in the cluster with the binding site in their promoter (Hits), the percentage of genes with the binding site in their promoter (Hits (%)), the total number of genes in the dataset with the binding site in their promoter (Total) and the pvalue of the binding site enrichment. To view the sequence logo for each motif, click on the motif name.
Motif Source Consensus Hits Hits (%) Total Pvalue
STE12_Q4 TRANSFAC ATGAAAC 22 53.65 556 3.78276e-05