This page displays data from Segal et al. and was kindly provided to SGD by Eran Segal.

Module 20 (12 Genes) - Cell Cycle Analysis

Jump to: Significant GO annotations | Significant Motif Binding Sites.

Predicted Regulatory Module

The control program is a set of gene products predicted to regulate the cluster of genes below. The prediction is based on the relationship between the expression of the regulator and the expression of genes in the cluster as described in Segal et al. In several instances, there is direct experimental evidence to corroborate the predicted function of the regulators. In this view, the regulators (circled gene products) are in a hierarchy according to their effects on gene expression in the experiments directly below them.

Jump to: Predicted Control Program | Significant Motif Binding Sites.

Significant GO Annotations
This table lists, in order of significance, all GO annotations enriched in this cluster at a pvalue below 0.01. For each significant GO annotation, this table displays the following statistics: the number of genes in the cluster with the annotation (Hits), the percentage of genes in the cluster with the annotation (Hits (%)), the total number of genes in the entire dataset with the annotation (Total) and the pvalue of the annotation enrichment.
GO Term	Ontology	Hits	Hits (%)	Total	Pvalue
cell wall	Cellular Component	8	66.66	39	3.14964e-10
external encapsulating structure	Cellular Component	8	66.66	39	3.14964e-10
hydrolase activity\, hydrolyzing O-glycosyl compounds	Molecular Function	5	41.66	14	8.18485e-08
hydrolase activity\, acting on glycosyl bonds	Molecular Function	5	41.66	16	1.76427e-07
mannoprotein biosynthesis	Biological Process	5	41.66	38	1.77182e-05
mannoprotein metabolism	Biological Process	5	41.66	38	1.77182e-05
cell wall organization and biogenesis	Biological Process	5	41.66	38	1.77182e-05
structural constituent of cell wall	Molecular Function	3	25	7	2.78245e-05
macromolecule biosynthesis	Biological Process	5	41.66	46	4.60432e-05
protein biosynthesis	Biological Process	5	41.66	48	5.68032e-05
glucosidase activity	Molecular Function	3	25	10	9.32044e-05
cytokinesis	Biological Process	5	41.66	75	0.000482798
cell wall (sensu Fungi)	Cellular Component	3	25	27	0.00198895
hydrolase activity	Molecular Function	5	41.66	109	0.00262058
structural molecule activity	Molecular Function	3	25	32	0.00324213
protein metabolism	Biological Process	5	41.66	134	0.00633757

Jump to: Predicted Control Program | Significant GO Annotations.

Significant Motif Binding Sites
This table lists, in order of significance, all motif binding sites enriched in this cluster at a pvalue below 0.01. For each significant motif binding site, the following statistics are displayed: the number of genes in the cluster with the binding site in their promoter (Hits), the percentage of genes with the binding site in their promoter (Hits (%)), the total number of genes in the dataset with the binding site in their promoter (Total) and the pvalue of the binding site enrichment. To view the sequence logo for each motif, click on the motif name.
Motif	Source	Consensus	Hits	Hits (%)	Total	Pvalue