The
transcriptional activator GCN4 contains clusters of hydrophobic residues
that make additive contributions to transcription in vivo. We observed
efficient binding of a GST-GCN4 fusion to components of TFIID,
holoenzyme mediator and ADA/GCN5 complex in cell extracts, that was
dependent on the hydrophobic clusters in the activation domain. There
were additive effects of the mutations on binding of coactivator
proteins in vitro that paralleled reductions in activation in vivo.
Immunoprecipitation studies have revealed that components of the
mediator are not associated with TFIID and the ADA/GCN5 complex in cell
extracts. GCN4 is thus believed to interact independently with TFIID,
ADA/GCN5 and mediator using nearly identical sets of hydrophobic
clusters for all these interactions. Full activation is dependent upon
interaction of GCN4 with all three complexes, as mutations in single
components of the three complexes can have dramatic effects on the ability
of GCN4 to function as a transcriptional activator in vivo. In vitro,
GST-GCN4 fusion was able to bind to partially purified holoenzyme
mediator in a manner similar that seen in cell extracts, suggesting that mediator is
one of the direct contacts of GCN4.
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