BNI4/YNL233W Single Page Format

Help

This page provides an alternative format to the SGD Locus Summary Page. Note that additional information may be available on or linked from the standard format SGD Locus Summary page.

Contents

SGD Locus Page

Names and Identifiers [TOP] [NEXT] Help
Standard Name Systematic Name Alias Feature Type SGDID
BNI4 YNL233W   ORF, Verified S000005177
Description
Targeting subunit for Glc7p protein phosphatase, localized to the bud neck, required for localization of chitin synthase III to the bud neck via interaction with the chitin synthase III regulatory subunit Skt5p

GO Annotations [TOP] [NEXT] Help
Molecular Function
Annotation(s)Reference(s)EvidenceAssigned By
protein bindingKozubowski L, et al. (2003) A Bni4-Glc7 phosphatase complex that recruits chitin synthase to the site of bud emergence. Mol Biol Cell 14(1):26-39
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2003-02-18
SGD
Biological Process
Annotation(s)Reference(s)EvidenceAssigned By
ER-nuclear signaling pathwayHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
asymmetric protein localizationKozubowski L, et al. (2003) A Bni4-Glc7 phosphatase complex that recruits chitin synthase to the site of bud emergence. Mol Biol Cell 14(1):26-39
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
IDA : Inferred from Direct Assay
Assigned on 2005-09-20
SGD
barrier septum formationSanz M, et al. (2004) Saccharomyces cerevisiae Bni4p directs the formation of the chitin ring and also participates in the correct assembly of the septum structure. Microbiology 150(Pt 10):3229-41
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IGI : Inferred from Genetic Interaction
Assigned on 2004-11-12
SGD
cell divisionHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
cellular cell wall organizationHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
chitin biosynthetic processSanz M, et al. (2004) Saccharomyces cerevisiae Bni4p directs the formation of the chitin ring and also participates in the correct assembly of the septum structure. Microbiology 150(Pt 10):3229-41
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IGI : Inferred from Genetic Interaction
TAS : Traceable Author Statement
IMP : Inferred from Mutant Phenotype
Assigned on 2004-11-12
SGD
cofactor transportHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
reproductionHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
response to unfolded proteinHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
sexual reproductionHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
Cellular Component
Annotation(s)Reference(s)EvidenceAssigned By
cellular bud neckSundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2004-10-08
SGD
cellular bud neck septin collarKozubowski L, et al. (2005) Role of the septin ring in the asymmetric localization of proteins at the mother-bud neck in Saccharomyces cerevisiae. Mol Biol Cell 16(8):3455-66
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2009-11-04
SGD
incipient cellular bud siteSanz M, et al. (2004) Saccharomyces cerevisiae Bni4p directs the formation of the chitin ring and also participates in the correct assembly of the septum structure. Microbiology 150(Pt 10):3229-41
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2004-11-12
SGD
Kozubowski L, et al. (2005) Role of the septin ring in the asymmetric localization of proteins at the mother-bud neck in Saccharomyces cerevisiae. Mol Biol Cell 16(8):3455-66
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2009-11-04
SGD
septin ringDeMarini DJ, et al. (1997) A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall. J Cell Biol 139(1):75-93
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
IPI : Inferred from Physical Interaction
Assigned on 2004-11-12
SGD
Kozubowski L, et al. (2005) Role of the septin ring in the asymmetric localization of proteins at the mother-bud neck in Saccharomyces cerevisiae. Mol Biol Cell 16(8):3455-66
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2009-11-04
SGD

Pathways [TOP] [NEXT] Help
No pathways available

Summary Paragraph [TOP] [NEXT] Help
SUMMARY PARAGRAPH for BNI4/YNL233W for BNI4
BNI4 encodes a scaffold protein that tethers chitin synthase III (Chs3p) to the bud neck by interacting with septin neck filaments and with Skt5p, which is a regulatory subunit of chitin synthase III (1). Bni4p is also involved in targeting protein phosphatase 1 (Glc7p) to the bud neck before bud emergence (1). Bni4p is required for the assembly of the chitin ring, and is also involved in septum formation and the maintenance of bud neck integrity (2).

Bni4p localization is regulated during the cell cycle, with the protein located on the exterior of the septin ring before budding and on the mother side of the collar after budding (3). Proper localization of Bni4p requires the actin cytoskeleton, and binding to Glc7p, since cells containing mutant bni4 that fails to associate with Glc7p display mislocalization of Bni4p (1, 3). Bni4 is phosphorylated in a cell cycle-dependent manner, and inactivation of the protein kinase Hsl1p affects Bni4p localization, but there is no evidence that Hsl1p directly phosphorylates Bni4p (1).

bni4 null mutants are viable, but display altered deposition of chitin, and mislocalization of Chs3p, Skt5p, and Glc7p (2, 1).

Last Updated: 2005-09-20

Basic References [TOP]   Help
BASIC INFORMATION REFERENCES forBNI4/YNL233W for BNI4
1)Kozubowski L, et al. (2003) A Bni4-Glc7 phosphatase complex that recruits chitin synthase to the site of bud emergence. Mol Biol Cell 14(1):26-39
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
2)Sanz M, et al. (2004) Saccharomyces cerevisiae Bni4p directs the formation of the chitin ring and also participates in the correct assembly of the septum structure. Microbiology 150(Pt 10):3229-41
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
3)Kozubowski L, et al. (2005) Role of the septin ring in the asymmetric localization of proteins at the mother-bud neck in Saccharomyces cerevisiae. Mol Biol Cell 16(8):3455-66
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
4)DeMarini DJ, et al. (1997) A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall. J Cell Biol 139(1):75-93
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

Mutant Phenotypes [TOP] [NEXT] Help
Phenotype page for BNI4/YNL233W

Interactions: genetic, physical, and other gene-gene links. [TOP] [NEXT] Help
Interaction page for BNI4/YNL233W

Homologs [TOP] [NEXT] Help
  • Comparison Resources
  • Physical Properties and Transcript Information: predicted from sequence [TOP] [NEXT] Help
    Protein Sequence Calculations
    from Predicted Full length Translation
    N-term MSDSISD
    C-term RCYTHFY
    Length(aa) 892
    MW(Da) 100,589
    pI 4.77
    Amino Acid Composition (full length)
    GCG tools: PepPlot, Helical Wheel, PepStruct

    Transcript Translation Calculations
    Codon Bias 0.046  
    Codon Adaptation Index 0.138  
    Frequency of Optimal Codons 0.439  
    Hydropathicity of Protein -0.923  
    Aromaticity Score 0.061  

                              10        20        30        40        50
                               |         |         |         |         |
                      MSDSISDSKSSELLNSTFYSSTSINTLDHARTFRNSLILKEISDQSLNSS
                      IKPCESVLDRDVESSVLQRSFGESNARDSEVQTVNMTTSPSLSALADILN
                      ERSKYADQKTRKAQNIESSIIEEEEEAEEQNNSINYHEDITGSRLSVREE
                      ANENLAMTSPNLIDIDGSNSIQVAPLSLPSFEEPDFLSTPRVKPDSQGPR
                      SKVSTRRTILERDNNLPVKREENTIINSETESTTHSAPFLKEDPKPSPPS
                      SKLYNPKVRLNKAEARKYTDSSAQRTTSAGSVLEDTSMHKKKKSIFSFLK
                      KKEPKPVIGNNSVTNEKNKMSSSSTFSMNIQTSLKTPEKLKKKSHSSSSI
                      FNSFLKGKIETSDSPRKEPMRQKKRTPKSKDKKQDTEQIIDAASVLSTES
                      PLLRKNHDDTPVKIDHVTRSIDQRKPTPLNMDLILGGDKQINTPLQEHVR
                      EDDDAKNDLQLPTKDNFLSLDYEAPSPAFSKHDTGEVLFPKFLDNHEVDS
                      IVSLERTRSTKSNKRSSMNSQRRSLTDTLSIKAQSEGMFITEASSVVLST
                      PDLTKSPASSILKNGRFEYSDNFSREHSYEGTTNEDFLDIKDDSGPLKKD
                      DIFLESIEQKFDQLVMASDEEKTEVERDVPKPREEPLKKDSERQSVFADD
                      DNELISDIMEFASFINFGDDDLNLDLDLGDTTASYATETPEPVGNDEVNR
                      SGTFDTRNNKEDSYKERETQSYSAAGATTYGDERQGQLHTFEQDGSEIND
                      NEFENEDFNKHIEQPIEVTPRNNAYLPEFEPNRPVSMSFKGLKAPRMNTS
                      FIDSMTPDSPVKSDLTSLGEVYVNSNNDQGVRFSSQIILYDTYGEFEYDR
                      HPEISTCNQLTPQLAQMIKLELNELKSAMEVHDDSRCYTHFY*
    

    Protein Structures from PDB: proteins of known structure with sequence similarity to BNI4/YNL233W, based on Smith-Waterman analysis. [TOP] [NEXT] Help
    No protein structure information available.

    Genome-wide Expression and Other Large-Scale Analyses [TOP] [NEXT] Help
  • Functional Analysis
  • You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses.

    Locus History (misc. notes) [TOP] [NEXT] Help
    Nomenclature History
    Standard NameReference
    BNI4DeMarini DJ, et al. (1997) A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall. J Cell Biol 139(1):75-93
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Sequence Retrieval [TOP] [NEXT] Help
    Sequence Type Output Format
    Genomic DNA GCG | FASTA | NoHeader
    Genomic DNA with 1 kb up and downstream GCG | FASTA | NoHeader
    DNA coding sequence
    (without introns, without flanking regions)
    GCG | FASTA | NoHeader
    Protein Translation of ORF GCG | FASTA | NoHeader
    6-Frame Translation(with Restriction Map) GCG
    Restriction Fragment Sizes GCG
  • Sequence Analysis Tools
  • Sequence from other databases
    Sequence IDSource
    YNL233WSGD Systematic Sequence
    855488NCBI: Gene ID
    NP_014166.1NCBI: RefSeq protein version ID
    NP_014166.1NCBI: RefSeq protein version ID
    6324096NCBI: NCBI protein GI

    Map and Displays [TOP] [NEXT] Help
    Physical, Genetic Maps: Chromosomal Feature Map GBrowse Combined Physical and Genetic Map Genetic Distance vs. Physical Distance Ratios
    Similarity Viewers: Synteny Viewer Genomic Stripe View SAGE Results Map  

    Localization [TOP] [NEXT] Help
  • Localization Resources
  • Community Annotation [TOP] [NEXT] Help
    No community annotation available.

    Literature Guide: papers categorized by topic. [TOP]   Help
    TopicsReferenceOther Genes Addressed
    33 curated references; 0 references not yet curated
    Cellular Location
    Regulation of
    Strains/Constructs
    Gomez A, et al. (2009) Slt2 and Rim101 contribute independently to the correct assembly of the chitin ring at the budding yeast neck in Saccharomyces cerevisiae. Eukaryot Cell 8(9):1449-59
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CCT7 |CDC3 |CHS1 |CHS3 |CTS1 |GFA1 |MYO1 |RIM101 |SKT5 |SLT2
    Mutants/Phenotypes
    Strains/Constructs
    Hontz RD, et al. (2009) Genetic Identification of Factors That Modulate Ribosomal DNA Transcription in Saccharomyces cerevisiae. Genetics 182(1):105-19
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AAP1 |ADA2 |AGC1 |ATG2 |BRE1 |CHD1 |CHS6 |CIN1 |CMP2 |DAS2 |DPB11 |ECM29 |FUR4 |GAP1 |MORE
    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Protein Processing/Modification/Regulation
    Protein-protein Interactions
    Regulation of
    Strains/Constructs
    Zou J, et al. (2009) Regulation of cell polarity through phosphorylation of Bni4 by Pho85 G1 cyclin-dependent kinases in Saccharomyces cerevisiae. Mol Biol Cell 20(14):3239-50
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AIM44 |APL3 |AXL1 |BCK1 |BEM1 |BEM2 |BNI1 |BNR1 |BOI1 |BOP3 |BUD22 |BUD3 |BUD4 |CDC10 |MORE
    Reviews
    Barral Y and Kinoshita M (2008) Structural insights shed light onto septin assemblies and function. Curr Opin Cell Biol 20(1):12-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CDC10 |CDC11 |CDC12 |CDC3 |HSL1 |HSL7 |KCC4 |SHS1 |SPR28 |SPR3
    Mutants/Phenotypes
    Strains/Constructs
    Bharucha JP, et al. (2008) Saccharomyces cerevisiae Afr1 protein is a protein phosphatase 1/Glc7-targeting subunit that regulates the septin cytoskeleton during mating. Eukaryot Cell 7(8):1246-55
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AFR1 |CDC10 |CDC12 |GLC7
    Cellular Location
    Cross-species Expression
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Protein Sequence Features
    Protein-protein Interactions
    Regulatory Role
    Strains/Constructs
    Larson JR, et al. (2008) Protein Phosphatase Type 1 Directs Chitin Synthesis at the Bud Neck in Saccharomyces cerevisiae. Mol Biol Cell 19(7):3040-51
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BNI1 |CDC10 |CHS3 |GLC7
    Cellular Location
    Computational analysis
    Qi Y, et al. (2008) Finding friends and enemies in an enemies-only network: A graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions. Genome Res 18(12):1991-2004
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AAH1 |ADA2 |AGE1 |AGE2 |AIM29 |ALG3 |ALG5 |ALG6 |ALG8 |ALG9 |ANP1 |ARL3 |ARP3 |ARP4 |MORE
    Genomic expression study
    RNA Levels and Processing
    Yiu G, et al. (2008) Pathways change in expression during replicative aging in Saccharomyces cerevisiae. J Gerontol A Biol Sci Med Sci 63(1):21-34
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  yfgdb  
    |AML1 |BUD14 |BUD23 |DIM1 |GAC1 |GCD10 |GLC7 |GLC8 |GSY2 |HXT15 |HXT17 |HXT2 |HXT3 |HXT5 |MORE
    Protein Sequence Features
    Chang EJ, et al. (2007) Prediction of cyclin-dependent kinase phosphorylation substrates. PLoS One 2(7):e656
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |ACC1 |ACE2 |ACM1 |ADY3 |AFI1 |ALY2 |ASE1 |ASH1 |BCK1 |BEM3 |BNI1 |BOI1 |BUD3 |BUD4 |MORE
    Function/Process
    Genetic Interactions
    Gray JV and Krause SA (2007) Identifying in vivo pathways using genome-wide genetic networks. Biochem Soc Trans 35(Pt 6):1538-41
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BEM2 |CHS1 |CHS3 |CHS5 |CHS6 |CHS7 |FKS1 |HOC1 |HSP82 |KRE11 |RVS167 |SKT5 |SLT2 |SMI1
    Mutants/Phenotypes
    Kramer RW, et al. (2007) Yeast functional genomic screens lead to identification of a role for a bacterial effector in innate immunity regulation. PLoS Pathog 3(2):e21
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |AFR1 |BMH1 |BNI1 |BRO1 |BUD22 |CCW12 |CDC10 |CDC26 |CNM67 |CWP1 |DAD3 |ECM33 |FIT2 |FIT3 |MORE
    Cell Cycle Phase Involved
    Transcription
    Rowicka M, et al. (2007) High-resolution timing of cell cycle-regulated gene expression. Proc Natl Acad Sci U S A 104(43):16892-7
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  Web Supplement  
    |BUD13 |CDC11 |CDC12 |CDC28 |CDC3 |CLB1 |CLN2 |CLN3 |FKS1 |GAS1 |GAS5 |GIC2 |HHF2 |HHO1 |MORE
    Protein-protein Interactions
    Walsh EP, et al. (2007) Proteins interacting with Saccharomyces cerevisiae type 1 protein phosphatase catalytic subunit identified by single-step affinity purification and mass spectrometry. Methods Mol Biol 365:235-46
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CFT1 |CFT2 |GIP3 |GLC7 |HER1 |MHP1 |PAP1 |PFS2 |PTA1 |REF2 |RPL27B |RPL3 |RPL4B |SDS22 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Gladfelter AS, et al. (2005) Interplay between septin organization, cell cycle and cell shape in yeast. J Cell Sci 118(Pt 8):1617-28
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BNI1 |BNR1 |BUD3 |BUD4 |BUD5 |CDC12 |CDC42 |CLN1 |CLN2 |SWE1
    Cellular Location
    Kozubowski L, et al. (2005) Role of the septin ring in the asymmetric localization of proteins at the mother-bud neck in Saccharomyces cerevisiae. Mol Biol Cell 16(8):3455-66
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |BEM3 |CDC11 |CDC12 |CDC3 |CDC42 |CLA4 |ELM1 |GIN4 |KCC4 |RGA1 |RGA2 |SHS1
    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Lesage G, et al. (2005) An interactional network of genes involved in chitin synthesis in Saccharomyces cerevisiae. BMC Genet 6():8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  yfgdb  
    |CHS1 |CHS3 |CHS5 |CHS6 |CHS7 |SHC1 |SKT5 |YGL081W
    Cellular Location
    Strains/Constructs
    Techniques and Reagents
    Rodal AA, et al. (2005) Actin and septin ultrastructures at the budding yeast cell cortex. Mol Biol Cell 16(1):372-84
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |ABP1 |ARP2 |ARP3 |CDC10 |CDC12 |CDC3 |CRN1 |KCC4 |MYO3 |MYO5 |SLA1 |SLA2
    Fungal Related Genes/Proteins
    Rowbottom L, et al. (2004) Candida albicans mutants in the BNI4 gene have reduced cell-wall chitin and alterations in morphogenesis. Microbiology 150(Pt 10):3243-52
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Sanz M, et al. (2004) Saccharomyces cerevisiae Bni4p directs the formation of the chitin ring and also participates in the correct assembly of the septum structure. Microbiology 150(Pt 10):3229-41
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CHS3 |SKT5
    Cellular Location
    Sundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ALG14 |ASF2 |AXL2 |CSI2 |DPB2 |HSL1 |JEM1 |KCC4 |MCD1 |MPS3 |NBP1 |POL12 |POL30 |PRI2 |MORE
    Genetic Interactions
    Strains/Constructs
    Tong AH, et al. (2004) Global mapping of the yeast genetic interaction network. Science 303(5659):808-13
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  yfgdb  
    |AAD4 |AAH1 |ABF2 |ACE2 |ADH6 |AEP2 |AFG1 |AGP1 |AHC1 |AHC2 |AIM21 |AIM22 |AIM26 |AIM29 |MORE
    Cellular Location
    Function/Process
    Mutants/Phenotypes
    Protein Processing/Modification/Regulation
    Protein-protein Interactions
    Strains/Constructs
    Kozubowski L, et al. (2003) A Bni4-Glc7 phosphatase complex that recruits chitin synthase to the site of bud emergence. Mol Biol Cell 14(1):26-39
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |GLC7 |HSL1 |SKT5
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Rodriguez-Pena JM, et al. (2002) Mechanisms for targeting of the Saccharomyces cerevisiae GPI-anchored cell wall protein Crh2p to polarised growth sites. J Cell Sci 115(Pt 12):2549-58
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CDC10 |CDC15 |CDC42 |CHS5 |CWP1 |RSR1 |SBE2 |SBE22 |UTR2
    Function/Process
    Protein-protein Interactions
    Walsh EP, et al. (2002) Novel interactions of Saccharomyces cerevisiae type 1 protein phosphatase identified by single-step affinity purification and mass spectrometry. Biochemistry 41(7):2409-20
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |GIP3 |GLC7 |MHP1 |PTA1 |REF2 |SDS22
    Mutants/Phenotypes
    Stevenson LF, et al. (2001) A large-scale overexpression screen in Saccharomyces cerevisiae identifies previously uncharacterized cell cycle genes. Proc Natl Acad Sci U S A 98(7):3946-51
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Web Supplement  
    |ABF1 |ACS2 |ACT1 |ALO1 |ARF1 |ARF2 |BFA1 |BIM1 |CAJ1 |CCC1 |CDC14 |CDC20 |CDC55 |CDH1 |MORE
    Genetic Interactions
    Strains/Constructs
    Tong AH, et al. (2001) Systematic genetic analysis with ordered arrays of yeast deletion mutants. Science 294(5550):2364-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  yfgdb  
    |ARC18 |ARC40 |ARP1 |ARP2 |ARP6 |ASE1 |ASF1 |ATS1 |BBC1 |BCK1 |BEM1 |BEM2 |BEM4 |BFA1 |MORE
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    de Groot PW, et al. (2001) A genomic approach for the identification and classification of genes involved in cell wall formation and its regulation in Saccharomyces cerevisiae. Comp Funct Genomics 2(3):124-42
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |AAD4 |AIM22 |ALG12 |ALK2 |ARE2 |ARG2 |ARP5 |ASI2 |ATG4 |ATG9 |AVL9 |AVT1 |AVT4 |BFA1 |MORE
    Mutants/Phenotypes
    Strains/Constructs
    Capozzo C, et al. (2000) Gene disruption and basic phenotypic analysis of nine novel yeast genes from chromosome XIV. Yeast 16(12):1089-97
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CSL4 |NAF1 |NCS2 |NMA111 |NOP15 |PDR16 |YNL108C |YNL115C
    Reviews
    Pruyne D and Bretscher A (2000) Polarization of cell growth in yeast. J Cell Sci 113 ( Pt 4):571-85
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ABP1 |ACT1 |AIP1 |ARC15 |ARC18 |ARC19 |ARC35 |ARC40 |ARP2 |ARP3 |AXL2 |BEM1 |BNI1 |BNR1 |MORE
    Cellular Location
    Mutants/Phenotypes
    Strains/Constructs
    Techniques and Reagents
    Ross-Macdonald P, et al. (1999) Large-scale analysis of the yeast genome by transposon tagging and gene disruption. Nature 402(6760):413-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  yfgdb  
    |AIM23 |CIK1 |CIN1 |CRN1 |ECM33 |IMP2 |MRM1 |NAN1 |NDI1 |NSR1 |OXA1 |PCP1 |PET122 |RIM20 |MORE
    Cellular Location
    Ayscough KR, et al. (1997) High rates of actin filament turnover in budding yeast and roles for actin in establishment and maintenance of cell polarity revealed using the actin inhibitor latrunculin-A. J Cell Biol 137(2):399-416
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |BEM1 |BUD6 |CAP2 |CDC10 |CDC11 |CDC42 |COF1 |END3 |GIN4 |MYO2 |SAC6 |SEC4 |SEC8 |MORE
    Cellular Location
    DNA/RNA Sequence Features
    Function/Process
    Mutants/Phenotypes
    Protein Sequence Features
    Protein-protein Interactions
    Regulation of
    Strains/Constructs
    DeMarini DJ, et al. (1997) A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall. J Cell Biol 139(1):75-93
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CDC10 |CDC11 |CDC12 |CDC3 |CHS3 |SKT5
    DNA/RNA Sequence Features
    Mapping
    Pandolfo D, et al. (1996) The DNA sequence of cosmid 14-5 from chromosome XIV reveals 21 open reading frames including a novel gene encoding a globin-like domain. Yeast 12(10B Suppl):1071-6
    SGD Papers Entry  Pubmed Entry  
    |ATG2 |CSL4 |HDA1 |JJJ1 |KEX2 |LAP3 |SIN4 |SLA2 |SQS1 |URE2 |YNL234W |YTP1 |ZWF1


    Return to SGD
    Send a Message to the SGD Curators

    SGDtm pages Database Copyright © 1997-2010 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.