NDC1/YML031W Single Page Format

Help

This page provides an alternative format to the SGD Locus Summary Page. Note that additional information may be available on or linked from the standard format SGD Locus Summary page.

Contents

SGD Locus Page

Names and Identifiers [TOP] [NEXT] Help
Standard Name Systematic Name Alias Feature Type SGDID
NDC1 YML031W   ORF, Verified S000004493
Description
Nuclear envelope protein with multiple putative transmembrane domains, required for nuclear pore complex assembly and spindle pole body duplication; required for meiosis II

GO Annotations [TOP] [NEXT] Help
Molecular Function
Annotation(s)Reference(s)EvidenceAssigned By
structural constituent of cytoskeletonChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
Biological Process
Annotation(s)Reference(s)EvidenceAssigned By
RNA export from nucleusChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
Fabre E and Hurt E (1997) Yeast genetics to dissect the nuclear pore complex and nucleocytoplasmic trafficking. Annu Rev Genet 31:277-313
SGD Papers Entry  Pubmed Entry  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
establishment of protein localizationHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
mRNA export from nucleusTian W, et al. (2008) Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function. Genome Biol 9 Suppl 1:S7
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
RCA : Reviewed Computational Analysis
Assigned on 2009-09-03
YeastFunc
mRNA transportGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0509
Assigned on 2007-05-23
UniProtKB
Tian W, et al. (2008) Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function. Genome Biol 9 Suppl 1:S7
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
RCA : Reviewed Computational Analysis
Assigned on 2009-09-03
YeastFunc
microtubule nucleationChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
Winsor B and Schiebel E (1997) Review: an overview of the Saccharomyces cerevisiae microtubule and microfilament cytoskeleton. Yeast 13(5):399-434
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
nuclear pore organizationTian W, et al. (2008) Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function. Genome Biol 9 Suppl 1:S7
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
RCA : Reviewed Computational Analysis
Assigned on 2009-09-03
YeastFunc
nucleus organizationTian W, et al. (2008) Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function. Genome Biol 9 Suppl 1:S7
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
RCA : Reviewed Computational Analysis
Assigned on 2009-09-03
YeastFunc
protein import into nucleusChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
Fabre E and Hurt E (1997) Yeast genetics to dissect the nuclear pore complex and nucleocytoplasmic trafficking. Annu Rev Genet 31:277-313
SGD Papers Entry  Pubmed Entry  
IPI : Inferred from Physical Interaction
Assigned on 2001-01-18
SGD
protein transportGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0653
Assigned on 2007-05-23
UniProtKB
spindle pole body duplication in nuclear envelopeChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
Assigned on 2001-01-18
SGD
transmembrane transportGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0811
Assigned on 2009-10-01
UniProtKB
transportGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0813
Assigned on 2007-05-23
UniProtKB
Cellular Component
Annotation(s)Reference(s)EvidenceAssigned By
NDC1 complexOnischenko E, et al. (2009) Role of the Ndc1 interaction network in yeast nuclear pore complex assembly and maintenance. J Cell Biol 185(3):475-91
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction with SGD:POM152, SGD:POM34
IDA : Inferred from Direct Assay
Assigned on 2009-07-01
SGD
cytoplasmGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0963
Assigned on 2009-11-20
UniProtKB
cytoskeletonGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0206
Assigned on 2009-11-20
UniProtKB
integral to membraneGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0812
Assigned on 2007-05-23
UniProtKB
GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-9909
Assigned on 2009-10-01
UniProtKB
membraneGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0472
Assigned on 2007-05-23
UniProtKB
nuclear poreChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2001-01-18
SGD
Rout MP, et al. (2000) The yeast nuclear pore complex: composition, architecture, and transport mechanism. J Cell Biol 148(4):635-51
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-06-17
SGD
GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0906
Assigned on 2007-05-23
UniProtKB
GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-0185
Assigned on 2009-05-06
UniProtKB
nucleusGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0539
Assigned on 2009-06-29
UniProtKB
spindle pole bodyChial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2001-01-18
SGD
GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-0252
Assigned on 2009-05-06
UniProtKB

Pathways [TOP] [NEXT] Help
No pathways available

Summary Paragraph [TOP] [NEXT] Help
No summary paragraph available

Basic References [TOP]   Help
BASIC INFORMATION REFERENCES forNDC1/YML031W for NDC1
1)Chial HJ, et al. (1999) Altered dosage of the Saccharomyces cerevisiae spindle pole body duplication gene, NDC1, leads to aneuploidy and polyploidy. Proc Natl Acad Sci U S A 96(18):10200-5
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
2)Thomas JH and Botstein D (1986) A gene required for the separation of chromosomes on the spindle apparatus in yeast. Cell 44(1):65-76
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
3)Lau CK, et al. (2004) A novel allele of Saccharomyces cerevisiae NDC1 reveals a potential role for the spindle pole body component Ndc1p in nuclear pore assembly. Eukaryot Cell 3(2):447-58
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
4)Hoyt, A. (1989) Personal Communication, Mortimer Map Edition 10
SGD Papers Entry  

Mutant Phenotypes [TOP] [NEXT] Help
Phenotype page for NDC1/YML031W

Interactions: genetic, physical, and other gene-gene links. [TOP] [NEXT] Help
Interaction page for NDC1/YML031W

Homologs [TOP] [NEXT] Help
  • Comparison Resources
  • Physical Properties and Transcript Information: predicted from sequence [TOP] [NEXT] Help
    Protein Sequence Calculations
    from Predicted Full length Translation
    N-term MIQTPRE
    C-term SGNPNAT
    Length(aa) 655
    MW(Da) 74,133
    pI 8.41
    Amino Acid Composition (full length)
    GCG tools: PepPlot, Helical Wheel, PepStruct

    Transcript Translation Calculations
    Codon Bias 0.066  
    Codon Adaptation Index 0.114  
    Frequency of Optimal Codons 0.441  
    Hydropathicity of Protein 0.005  
    Aromaticity Score 0.104  

                              10        20        30        40        50
                               |         |         |         |         |
                      MIQTPRELLNPRYTYHTIFSDVCKTRFNHLVTRLFFICSIIQTVVISLLA
                      LPHSPLWELALAFIPNILALNLVSLLIIVTRKNYMHVKNFGFANSLTFIL
                      GQLLSVKFLVYQGVYSMGSILLSFVLGVVFGRGGSGWKPYYKLFIWLVVP
                      TIYNLQHHVTDADKLSFNCENFFQAPQDYVLERVKRIMEKSVILSVISMF
                      VLPIFTTVFFSRQKSGLFDSFTNGVLAVTNLLIISCIIFITFEFINIAFD
                      AHMSIGCLHKGKLISNLSSTPMETLLSGLSADKPFTRLTAYQELAYRATS
                      LDPSLRAPIYHSKFRSSSGNTWSLILNECLKTIQINNEKVVQYLRSVQDL
                      GGSATARHKKKVENLDYMYENGKLTSANERLFGNRPSMMAPLRDNGLLDE
                      SPNRLRVRTDDSVLLNRGNKKRHRSSYYDNDLDETTQTFNGSIFTHETTF
                      MTAMRLMLKKLKNSIMSFIFPSYAERQSSDESDNYRLLPNGSNKAQISII
                      DIWSISKKRQAEKLVPLPICHANSVVALTGLLIRSKTEDPKGGIIASVGD
                      ILKTLERSICALGEFADWDPESMAYTAFQTQRTAQDRVQQDSEDEDSMKD
                      TTDMISVLYQLSTSAFMEIVLEYNVALNDVYLDADVAKLANWFLEVYASG
                      NPNAT*
    

    Protein Structures from PDB: proteins of known structure with sequence similarity to NDC1/YML031W, based on Smith-Waterman analysis. [TOP] [NEXT] Help
    No protein structure information available.

    Genome-wide Expression and Other Large-Scale Analyses [TOP] [NEXT] Help
  • Functional Analysis
  • You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses.

    Locus History (misc. notes) [TOP] [NEXT] Help
    Nomenclature History
    Standard NameReference
    NDC1Hoyt, A. (1989) Personal Communication, Mortimer Map Edition 10
    SGD Papers Entry  
    Mapping Notes
    DateNote
    1989-10-01Edition 10: ndc1 is physically adjacent to rad52

    Mortimer RK, et al. (1989) Genetic map of Saccharomyces cerevisiae, edition 10. Yeast 5(5):321-403
    SGD Papers Entry  Pubmed Entry  SGD Curated Comments & Errata

    Sequence Retrieval [TOP] [NEXT] Help
    Sequence Type Output Format
    Genomic DNA GCG | FASTA | NoHeader
    Genomic DNA with 1 kb up and downstream GCG | FASTA | NoHeader
    DNA coding sequence
    (without introns, without flanking regions)
    GCG | FASTA | NoHeader
    Protein Translation of ORF GCG | FASTA | NoHeader
    6-Frame Translation(with Restriction Map) GCG
    Restriction Fragment Sizes GCG
  • Sequence Analysis Tools
  • Sequence from other databases
    Sequence IDSource
    YML031WSGD Systematic Sequence
    854977NCBI: Gene ID
    NP_013681.1NCBI: RefSeq protein version ID
    NP_013681.1NCBI: RefSeq protein version ID
    6323610NCBI: NCBI protein GI

    Map and Displays [TOP] [NEXT] Help
    Physical, Genetic Maps: Chromosomal Feature Map GBrowse Combined Physical and Genetic Map Genetic Distance vs. Physical Distance Ratios
    Similarity Viewers: Synteny Viewer Genomic Stripe View SAGE Results Map  

    Localization [TOP] [NEXT] Help
  • Localization Resources
  • Community Annotation [TOP] [NEXT] Help
    No community annotation available.

    Literature Guide: papers categorized by topic. [TOP]   Help
    TopicsReferenceOther Genes Addressed
    34 curated references; 0 references not yet curated
    Cellular Location
    Regulation of
    Makio T, et al. (2009) The nucleoporins Nup170p and Nup157p are essential for nuclear pore complex assembly. J Cell Biol 185(3):459-73
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |APQ12 |ASM4 |GLE1 |KAP104 |KAP123 |KAP95 |MLP1 |NAB2 |NUP1 |NUP100 |NUP133 |NUP157 |NUP159 |NUP170 |MORE
    Cellular Location
    Protein-protein Interactions
    Strains/Constructs
    Onischenko E, et al. (2009) Role of the Ndc1 interaction network in yeast nuclear pore complex assembly and maintenance. J Cell Biol 185(3):475-91
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |MPS3 |NPL3 |NUP133 |NUP157 |NUP170 |NUP188 |NUP2 |NUP53 |NUP82 |POM152 |POM34
    Reviews
    Rexach M (2009) Piecing together nuclear pore complex assembly during interphase. J Cell Biol 185(3):377-9
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |NIC96 |NUP157 |NUP170 |NUP188 |NUP53 |NUP82 |NUP84 |POM152 |POM34 |RTN1 |YOP1
    Cellular Location
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Sezen B, et al. (2009) The SESA network links duplication of the yeast centrosome with the protein translation machinery. Genes Dev 23(13):1559-70
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASC1 |BBP1 |BFR1 |BRE5 |CDC33 |EAP1 |GCN4 |MLP1 |MLP2 |MPS2 |NIP1 |PGK1 |POM152 |POM34 |MORE
    Mutants/Phenotypes
    Strains/Constructs
    Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AAR2 |ABD1 |ABF1 |ACC1 |ACP1 |ADE13 |AFG2 |ALA1 |ALG1 |ALG13 |ALG14 |ALG2 |ALG7 |ALR1 |MORE
    Protein-protein Interactions
    Patel SS and Rexach MF (2008) Discovering novel interactions at the nuclear pore complex using bead halo: a rapid method for detecting molecular interactions of high and low affinity at equilibrium. Mol Cell Proteomics 7(1):121-31
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |GLE1 |KAP95 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP53 |NUP60 |NUP84 |POM34 |SEH1 |SRM1 |MORE
    Cellular Location
    Computational analysis
    Protein Physical Properties
    Protein-protein Interactions
    Protein/Nucleic Acid Structure
    Alber F, et al. (2007) Determining the architectures of macromolecular assemblies. Nature 450(7170):683-94
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |ASM4 |GLE1 |GLE2 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP145 |NUP157 |NUP159 |NUP170 |MORE
    Cellular Location
    Evolution
    Protein/Nucleic Acid Structure
    Alber F, et al. (2007) The molecular architecture of the nuclear pore complex. Nature 450(7170):695-701
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |ASM4 |GLE1 |GLE2 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP145 |NUP157 |NUP159 |NUP170 |MORE
    Large-scale protein localization
    Lind K and Norbeck J (2007) Immuno-qPCR detection of the tandem affinity purification (TAP)-tag as a sensitive and accurate tool suitable for large-scale protein quantification. Proteomics 7(24):4414-23
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ARH1 |CDC13 |CDC23 |CDC27 |CLF1 |CTT1 |DAK1 |ERG8 |FPS1 |HOR2 |HXK2 |HXT1 |HXT7 |MCD1 |MORE
    Cellular Location
    Function/Process
    Protein Sequence Features
    Protein-protein Interactions
    Patel SS, et al. (2007) Natively unfolded nucleoporins gate protein diffusion across the nuclear pore complex. Cell 129(1):83-96
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |GLE1 |GLE2 |KAP95 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP157 |NUP159 |NUP170 |NUP192 |NUP2 |MORE
    Reviews
    Taddei A (2007) Active genes at the nuclear pore complex. Curr Opin Cell Biol 19(3):305-310
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |CDC31 |DBP5 |GAL1 |GFD1 |GLE1 |GLE2 |HSP104 |HTZ1 |INO1 |KAP120 |KAP122 |KAP123 |KAP95 |MORE
    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Protein-protein Interactions
    Strains/Constructs
    Araki Y, et al. (2006) The Saccharomyces cerevisiae spindle pole body (SPB) component Nbp1p is required for SPB membrane insertion and interacts with the integral membrane proteins Ndc1p and Mps2p. Mol Biol Cell 17(4):1959-70
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BBP1 |CDC31 |MPS1 |MPS2 |MPS3 |NBP1 |SPC110 |SPC42
    Evolution
    Fungal Related Genes/Proteins
    De Hertogh B, et al. (2006) Emergence of species-specific transporters during evolution of the hemiascomycete phylum. Genetics 172(2):771-81
    SGD Papers Entry  Pubmed Entry  Reference full text  
    |AAC1 |AAC3 |ACS2 |ADP1 |ADY2 |AGC1 |AGP1 |AGP2 |AGP3 |ALP1 |ALR1 |ALR2 |ANT1 |AQR1 |MORE
    Computational analysis
    Non-Fungal Related Genes/Proteins
    Protein Sequence Features
    Protein/Nucleic Acid Structure
    Strains/Constructs
    Devos D, et al. (2006) Simple fold composition and modular architecture of the nuclear pore complex. Proc Natl Acad Sci U S A 103(7):2172-7
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP145 |NUP157 |NUP159 |NUP170 |NUP188 |NUP192 |MORE
    Cellular Location
    Function/Process
    Non-Fungal Related Genes/Proteins
    Protein Sequence Features
    Lau CK, et al. (2006) Topology of yeast Ndc1p: predictions for the human NDC1/NET3 homologue. Anat Rec A Discov Mol Cell Evol Biol 288(7):681-94
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Madrid AS, et al. (2006) The role of the integral membrane nucleoporins Ndc1p and Pom152p in nuclear pore complex assembly and function. J Cell Biol 173(3):361-71
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |NPL3 |NUP159 |NUP60 |POM152 |POM34
    Non-Fungal Related Genes/Proteins
    Mansfeld J, et al. (2006) The conserved transmembrane nucleoporin NDC1 is required for nuclear pore complex assembly in vertebrate cells. Mol Cell 22(1):93-103
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Non-Fungal Related Genes/Proteins
    Stavru F, et al. (2006) NDC1: a crucial membrane-integral nucleoporin of metazoan nuclear pore complexes. J Cell Biol 173(4):509-19
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Lau CK, et al. (2004) A novel allele of Saccharomyces cerevisiae NDC1 reveals a potential role for the spindle pole body component Ndc1p in nuclear pore assembly. Eukaryot Cell 3(2):447-58
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |NIC96 |NUP49
    Protein Physical Properties
    Protein Sequence Features
    Denning DP, et al. (2003) Disorder in the nuclear pore complex: the FG repeat regions of nucleoporins are natively unfolded. Proc Natl Acad Sci U S A 100(5):2450-5
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |ASM4 |CDC31 |GLE1 |GLE2 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP145 |NUP157 |NUP159 |MORE
    Cellular Location
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    McBratney S and Winey M (2002) Mutant membrane protein of the budding yeast spindle pole body is targeted to the endoplasmic reticulum degradation pathway. Genetics 162(2):567-78
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CUE1 |HRD1 |MPS2 |UBC6 |UBC7
    Cellular Location
    Genetic Interactions
    Strains/Constructs
    Marelli M, et al. (2001) A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope. J Cell Biol 153(4):709-24
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |NUP170 |NUP53 |POM152 |PSE1
    Reviews
    Vasu SK and Forbes DJ (2001) Nuclear pores and nuclear assembly. Curr Opin Cell Biol 13(3):363-75
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |CDC31 |GLE1 |GLE2 |MLP1 |MLP2 |NIC96 |NSP1 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP145 |MORE
    Reviews
    Adams IR and Kilmartin JV (2000) Spindle pole body duplication: a model for centrosome duplication? Trends Cell Biol 10(8):329-35
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BBP1 |CDC31 |CMD1 |CNM67 |KAR1 |MPS2 |NUD1 |SPC110 |SPC29 |SPC42 |SPC72 |SPC97 |SPC98 |TUB4
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Chial HJ, et al. (2000) Yeast Eap1p, an eIF4E-associated protein, has a separate function involving genetic stability. Curr Biol 10(23):1519-22
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CDC33 |EAP1
    Cellular Location
    Protein Physical Properties
    Strains/Constructs
    Techniques and Reagents
    Rout MP, et al. (2000) The yeast nuclear pore complex: composition, architecture, and transport mechanism. J Cell Biol 148(4):635-51
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AIM4 |ASM4 |BMS1 |BUD20 |CTR9 |GLE1 |GLE2 |HAS1 |KAP120 |KAP122 |KAP123 |KAP95 |KRR1 |MEX67 |MORE
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Chial HJ, et al. (1999) Altered dosage of the Saccharomyces cerevisiae spindle pole body duplication gene, NDC1, leads to aneuploidy and polyploidy. Proc Natl Acad Sci U S A 96(18):10200-5
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Techniques and Reagents
    Chial HJ, et al. (1998) Saccharomyces cerevisiae Ndc1p is a shared component of nuclear pore complexes and spindle pole bodies. J Cell Biol 143(7):1789-800
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |NUP49 |POM152 |SPC42
    Fungal Related Genes/Proteins
    West RR, et al. (1998) cut11(+): A gene required for cell cycle-dependent spindle pole body anchoring in the nuclear envelope and bipolar spindle formation in Schizosaccharomyces pombe. Mol Biol Cell 9(10):2839-55
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Reviews
    Sobel SG (1997) Mini review: mitosis and the spindle pole body in Saccharomyces cerevisiae. J Exp Zool 277(2):120-38
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CDC31 |CIK1 |DYN1 |KAR1 |KAR3 |MPS1 |MPS2 |NUM1 |SPC110 |SPC42 |TUB1 |TUB2 |TUB4
    Reviews
    Winsor B and Schiebel E (1997) Review: an overview of the Saccharomyces cerevisiae microtubule and microfilament cytoskeleton. Yeast 13(5):399-434
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASE1 |BBP1 |BIK1 |BIM1 |CAP1 |CAP2 |CBC2 |CDC31 |CEN3 |CEN5 |CNM67 |DSK2 |DYN1 |DYN2 |MORE
    Reviews
    Winey M and Byers B (1993) Assembly and functions of the spindle pole body in budding yeast. Trends Genet 9(9):300-4
    SGD Papers Entry  Pubmed Entry  
    |CDC31 |CIK1 |CIN8 |KAR1 |MPS1 |SPC110 |SPC42 |SPC98
    Cell Cycle Phase Involved
    Cellular Location
    Function/Process
    Mutants/Phenotypes
    Protein Physical Properties
    Protein Sequence Features
    Strains/Constructs
    Techniques and Reagents
    Winey M, et al. (1993) NDC1: a nuclear periphery component required for yeast spindle pole body duplication. J Cell Biol 122(4):743-51
    SGD Papers Entry  Pubmed Entry  
    |CDC34
    Cell Cycle Phase Involved
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Thomas JH and Botstein D (1986) A gene required for the separation of chromosomes on the spindle apparatus in yeast. Cell 44(1):65-76
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CCS1 |RAD52


    Return to SGD
    Send a Message to the SGD Curators

    SGDtm pages Database Copyright © 1997-2010 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.