LCB3/YJL134W Single Page Format

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This page provides an alternative format to the SGD Locus Summary Page. Note that additional information may be available on or linked from the standard format SGD Locus Summary page.

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SGD Locus Page

Names and Identifiers [TOP] [NEXT] Help
Standard Name Systematic Name Alias Feature Type SGDID
LCB3 YJL134W LBP1, YSR2 ORF, Verified S000003670
Description
Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate, regulates ceramide and long-chain base phosphates levels, involved in incorporation of exogenous long chain bases in sphingolipids

GO Annotations [TOP] [NEXT] Help
Molecular Function
Annotation(s)Reference(s)EvidenceAssigned By
catalytic activityDDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:IPR000326
Assigned on 2008-02-13
UniProtKB
hydrolase activityGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0378
Assigned on 2009-01-12
UniProtKB
sphingosine-1-phosphate phosphatase activityMao C, et al. (1997) Identification and characterization of Saccharomyces cerevisiae dihydrosphingosine-1-phosphate phosphatase. J Biol Chem 272(45):28690-4
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2003-03-12
SGD
Birchwood CJ, et al. (2001) Calcium influx and signaling in yeast stimulated by intracellular sphingosine 1-phosphate accumulation. J Biol Chem 276(15):11712-8
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
TAS : Traceable Author Statement
Assigned on 2002-08-30
SGD
Biological Process
Annotation(s)Reference(s)EvidenceAssigned By
calcium-mediated signalingBirchwood CJ, et al. (2001) Calcium influx and signaling in yeast stimulated by intracellular sphingosine 1-phosphate accumulation. J Biol Chem 276(15):11712-8
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
Assigned on 2002-09-25
SGD
lipid metabolic processGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0443
Assigned on 2009-10-01
UniProtKB
sphingolipid biosynthetic processMao C and Obeid LM (2000) Yeast sphingosine-1-phosphate phosphatases: assay, expression, deletion, purification, and cellular localization by GFP tagging. Methods Enzymol 311:223-32
SGD Papers Entry  Pubmed Entry  
TAS : Traceable Author Statement
Assigned on 2002-08-21
SGD
sphingolipid metabolic processGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0746
Assigned on 2009-01-12
UniProtKB
Cellular Component
Annotation(s)Reference(s)EvidenceAssigned By
endoplasmic reticulumMao C, et al. (1999) The dihydrosphingosine-1-phosphate phosphatases of Saccharomyces cerevisiae are important regulators of cell proliferation and heat stress responses. Biochem J 342 Pt 3():667-75
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-09-25
SGD
GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0256
Assigned on 2007-05-23
UniProtKB
integral to membraneGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0812
Assigned on 2007-05-23
UniProtKB
GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-9909
Assigned on 2009-10-01
UniProtKB
membraneDDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:IPR000326
Assigned on 2008-02-13
UniProtKB
GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0472
Assigned on 2007-05-23
UniProtKB

Pathways [TOP] [NEXT] Help
sphingolipid metabolism

Summary Paragraph [TOP] [NEXT] Help
SUMMARY PARAGRAPH for LCB3/YJL134W for LCB3
About sphingolipid metabolism

Sphingolipids are essential components of the plasma membrane in all eukaryotic cells. S. cerevisiae cells make three complex sphingolipids: inositol-phosphoceramide (IPC), mannose-inositol-phosphoceramide (MIPC), and mannose-(inositol phosphate)2-ceramide (M(IP)2C)(1). In the yeast plasma membrane sphingolipids concentrate with ergosterol to form lipid rafts, specialized membrane microdomains implicated in a variety of cellular processes, including sorting of membrane proteins and lipids, as well as organizing and regulating signaling cascades (2). Intermediates in sphingolipid biosynthesis have been shown to play important roles as signaling molecules and growth regulators. Sphingolipid long chain bases (LCBs), dihydrosphingosine (DHS) and phytosphingosine (PHS), have been implicated as secondary messengers in signaling pathways that regulate heat stress response (3, 4). Other intermediates, phytoceramide and long-chain base phosphates (LCBPs), have been shown to be components of the tightly-controlled ceramide/LCBP rheostat, which regulates cell growth (5). Since phosphoinositol-containing sphingolipids are unique to fungi, the sphingolipid biosynthesis pathway is considered a target for antifungal drugs (6, 7).

Last Updated: 2007-10-05

Basic References [TOP]   Help
BASIC INFORMATION REFERENCES forLCB3/YJL134W for LCB3
1)Dickson RC and Lester RL (2002) Sphingolipid functions in Saccharomyces cerevisiae. Biochim Biophys Acta 1583(1):13-25
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
2)Bagnat M and Simons K (2002) Lipid rafts in protein sorting and cell polarity in budding yeast Saccharomyces cerevisiae. Biol Chem 383(10):1475-80
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
3)Jenkins GM, et al. (1997) Involvement of yeast sphingolipids in the heat stress response of Saccharomyces cerevisiae. J Biol Chem 272(51):32566-72
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
4)Ferguson-Yankey SR, et al. (2002) Mutant analysis reveals complex regulation of sphingolipid long chain base phosphates and long chain bases during heat stress in yeast. Yeast 19(7):573-86
SGD Papers Entry  Pubmed Entry  
5)Kobayashi SD and Nagiec MM (2003) Ceramide/long-chain base phosphate rheostat in Saccharomyces cerevisiae: regulation of ceramide synthesis by Elo3p and Cka2p. Eukaryot Cell 2(2):284-94
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
6)Nagiec MM, et al. (1997) Sphingolipid synthesis as a target for antifungal drugs. Complementation of the inositol phosphorylceramide synthase defect in a mutant strain of Saccharomyces cerevisiae by the AUR1 gene. J Biol Chem 272(15):9809-17
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
7)Sugimoto Y, et al. (2004) IPC synthase as a useful target for antifungal drugs. Curr Drug Targets Infect Disord 4(4):311-22
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
8)Mao C, et al. (1997) Identification and characterization of Saccharomyces cerevisiae dihydrosphingosine-1-phosphate phosphatase. J Biol Chem 272(45):28690-4
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
9)Mandala SM, et al. (1998) Sphingoid base 1-phosphate phosphatase: a key regulator of sphingolipid metabolism and stress response. Proc Natl Acad Sci U S A 95(1):150-5
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
10)Qie L, et al. (1997) Identification of a Saccharomyces gene, LCB3, necessary for incorporation of exogenous long chain bases into sphingolipids. J Biol Chem 272(26):16110-7
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
11)Kihara A, et al. (2003) Transmembrane topology of sphingoid long-chain base-1-phosphate phosphatase, Lcb3p. Genes Cells 8(6):525-35
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

Mutant Phenotypes [TOP] [NEXT] Help
Phenotype page for LCB3/YJL134W

Interactions: genetic, physical, and other gene-gene links. [TOP] [NEXT] Help
Interaction page for LCB3/YJL134W

Homologs [TOP] [NEXT] Help
  • Comparison Resources
  • Physical Properties and Transcript Information: predicted from sequence [TOP] [NEXT] Help
    Protein Sequence Calculations
    from Predicted Full length Translation
    N-term MVDGLNT
    C-term FSLLNIA
    Length(aa) 409
    MW(Da) 47,371
    pI 9.33
    Amino Acid Composition (full length)
    GCG tools: PepPlot, Helical Wheel, PepStruct

    Transcript Translation Calculations
    Codon Bias 0.028  
    Codon Adaptation Index 0.113  
    Frequency of Optimal Codons 0.412  
    Hydropathicity of Protein 0.200  
    Aromaticity Score 0.154  

                              10        20        30        40        50
                               |         |         |         |         |
                      MVDGLNTSNIRKRARTLSNPNDFQEPNYLLDPGNHPSDHFRTRMSKFRFN
                      IREKLLVFTNNQSFTLSRWQKKYRSAFNDLYFTYTSLMGSHTFYVLCLPM
                      PVWFGYFETTKDMVYILGYSIYLSGFFKDYWCLPRPRAPPLHRITLSEYT
                      TKEYGAPSSHTANATGVSLLFLYNIWRMQESSVMVQLLLSCVVLFYYMTL
                      VFGRIYCGMHGILDLVSGGLIGIVCFIVRMYFKYRFPGLRIEEHWWFPLF
                      SVGWGLLLLFKHVKPVDECPCFQDSVAFMGVVSGIECCDWLGKVFGVTLV
                      YNLEPNCGWRLTLARLLVGLPCVVIWKYVISKPMIYTLLIKVFHLKDDRN
                      VAARKRLEATHKEGASKYECPLYIGEPKIDILGRFIIYAGVPFTVVMCSP
                      VLFSLLNIA*
    

    Protein Structures from PDB: proteins of known structure with sequence similarity to LCB3/YJL134W, based on Smith-Waterman analysis. [TOP] [NEXT] Help
    No protein structure information available.

    Genome-wide Expression and Other Large-Scale Analyses [TOP] [NEXT] Help
  • Functional Analysis
  • You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses.

    Locus History (misc. notes) [TOP] [NEXT] Help
    Nomenclature History
    Standard NameReference
    LCB3SGD (2007) Information without a citation in SGD
    SGD Papers Entry  

    Sequence Retrieval [TOP] [NEXT] Help
    Sequence Type Output Format
    Genomic DNA GCG | FASTA | NoHeader
    Genomic DNA with 1 kb up and downstream GCG | FASTA | NoHeader
    DNA coding sequence
    (without introns, without flanking regions)
    GCG | FASTA | NoHeader
    Protein Translation of ORF GCG | FASTA | NoHeader
    6-Frame Translation(with Restriction Map) GCG
    Restriction Fragment Sizes GCG
  • Sequence Analysis Tools
  • Sequence from other databases
    Sequence IDSource
    YJL134WSGD Systematic Sequence
    853307NCBI: Gene ID
    NP_012401.1NCBI: RefSeq protein version ID
    NP_012401.1NCBI: RefSeq protein version ID
    6322327NCBI: NCBI protein GI

    Map and Displays [TOP] [NEXT] Help
    Physical, Genetic Maps: Chromosomal Feature Map GBrowse Combined Physical and Genetic Map Genetic Distance vs. Physical Distance Ratios
    Similarity Viewers: Synteny Viewer Genomic Stripe View SAGE Results Map  

    Localization [TOP] [NEXT] Help
  • Localization Resources
  • Community Annotation [TOP] [NEXT] Help
    No community annotation available.

    Literature Guide: papers categorized by topic. [TOP]   Help
    TopicsReferenceOther Genes Addressed
    35 curated references; 0 references not yet curated
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    DeLuna A, et al. (2008) Exposing the fitness contribution of duplicated genes. Nat Genet 40(5):676-81
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  
    |GDH1 |GDH3 |ITR1 |ITR2 |NDE1 |NDE2 |YSR3
    Reviews
    Dickson RC (2008) Thematic Review Series: Sphingolipids. New insights into sphingolipid metabolism and function in budding yeast. J Lipid Res 49(5):909-21
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AUR1 |CSG2 |CSH1 |DPL1 |FEN1 |IFA38 |IPT1 |ISC1 |LCB1 |LCB2 |LCB4 |LCB5 |LIP1 |PHS1 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Brace JL, et al. (2007) SVF1 regulates cell survival by affecting sphingolipid metabolism in Saccharomyces cerevisiae. Genetics 175(1):65-76
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPL1 |LCB4 |SUR2 |SVF1 |YPK1
    Reviews
    Cowart LA and Obeid LM (2007) Yeast sphingolipids: recent developments in understanding biosynthesis, regulation, and function. Biochim Biophys Acta 1771(3):421-31
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AUR1 |CSG2 |CSH1 |DPL1 |FEN1 |ISC1 |LAC1 |LAG1 |LCB1 |LCB2 |LCB4 |LCB5 |SUR1 |SUR4 |MORE
    Reviews
    Kihara A, et al. (2007) Metabolism and biological functions of two phosphorylated sphingolipids, sphingosine 1-phosphate and ceramide 1-phosphate. Prog Lipid Res 46(2):126-44
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |DPL1 |LAC1 |LAG1 |LCB1 |LCB2 |LCB4 |LCB5 |LIP1 |SUR2 |TSC10 |TSC3 |YDC1 |YPC1 |YSR3
    Non-Fungal Related Genes/Proteins
    Le Stunff H, et al. (2007) Recycling of Sphingosine Is Regulated by the Concerted Actions of Sphingosine-1-phosphate Phosphohydrolase 1 and Sphingosine Kinase 2. J Biol Chem 282(47):34372-80
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Reviews
    Dickson RC, et al. (2006) Functions and metabolism of sphingolipids in Saccharomyces cerevisiae. Prog Lipid Res 45(6):447-65
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ARV1 |AUR1 |CSH1 |DPL1 |FEN1 |IPT1 |LCB1 |LCB2 |LCB4 |LCB5 |NCR1 |PKH1 |PKH2 |SCS7 |MORE
    Reviews
    Riezman H (2006) Organization and functions of sphingolipid biosynthesis in yeast. Biochem Soc Trans 34(3):367-369
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AUR1 |CSG2 |DPL1 |IPT1 |LAC1 |LAG1 |LCB1 |LCB2 |LCB4 |LCB5 |LIP1 |SUR1 |SUR2 |TSC3 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Gaigg B, et al. (2005) Synthesis of sphingolipids with very long chain fatty acids but not ergosterol is required for routing of newly synthesized plasma membrane ATPase to the cell surface of yeast. J Biol Chem 280(23):22515-22
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACB1 |ACC1 |ARE1 |ARE2 |AYR1 |CSG2 |DPL1 |ELO1 |ERG24 |ERG3 |ERG4 |ERG5 |FEN1 |HEM1 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Sano T, et al. (2005) Regulation of the sphingoid long-chain base kinase Lcb4p by ergosterol and heme: studies in phytosphingosine-resistant mutants. J Biol Chem 280(44):36674-82
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPL1 |ERG2 |ERG3 |ERG4 |ERG5 |ERG6 |HAP1 |HEM14 |HMG1 |KES1 |LCB4 |PBP1 |PDR5 |TPS1 |MORE
    Non-Fungal Related Genes/Proteins
    Reviews
    Saba JD and Hla T (2004) Point-counterpoint of sphingosine 1-phosphate metabolism. Circ Res 94(6):724-34
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |LCB4 |LCB5 |YSR3
    Function/Process
    Funato K, et al. (2003) Lcb4p is a key regulator of ceramide synthesis from exogenous long chain sphingoid base in Saccharomyces cerevisiae. J Biol Chem 278(9):7325-34
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |LCB4 |LCB5
    Cellular Location
    Function/Process
    Protein Sequence Features
    Substrates/Ligands/Cofactors
    Kihara A, et al. (2003) Transmembrane topology of sphingoid long-chain base-1-phosphate phosphatase, Lcb3p. Genes Cells 8(6):525-35
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPP1 |LPP1
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Kobayashi SD and Nagiec MM (2003) Ceramide/long-chain base phosphate rheostat in Saccharomyces cerevisiae: regulation of ceramide synthesis by Elo3p and Cka2p. Eukaryot Cell 2(2):284-94
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CKA2 |SUR4
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Bagnat M and Simons K (2002) Cell surface polarization during yeast mating. Proc Natl Acad Sci U S A 99(22):14183-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |BUL1 |BUL2 |ERG6 |FIG1 |FUS1 |FUS2 |GAP1 |HXT2 |LCB1 |PRM1 |SHO1 |STE6 |TRE1
    Reviews
    Bagnat M and Simons K (2002) Lipid rafts in protein sorting and cell polarity in budding yeast Saccharomyces cerevisiae. Biol Chem 383(10):1475-80
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AUR1 |CSG2 |IPT1 |LAC1 |LAG1 |LCB1 |LCB2 |LCB4 |LCB5 |SUR1 |SUR2 |TSC10 |YSR3
    Function/Process
    Ferguson-Yankey SR, et al. (2002) Mutant analysis reveals complex regulation of sphingolipid long chain base phosphates and long chain bases during heat stress in yeast. Yeast 19(7):573-86
    SGD Papers Entry  Pubmed Entry  
    |DPL1 |LCB4 |LCB5
    Reviews
    Funato K, et al. (2002) Biosynthesis and trafficking of sphingolipids in the yeast Saccharomyces cerevisiae. Biochemistry 41(51):15105-14
    SGD Papers Entry  Pubmed Entry  
    |ACB1 |AUR1 |CCC2 |CSG2 |DPL1 |ELO1 |FEN1 |FMP45 |IFA38 |IPT1 |ISC1 |LAC1 |LAG1 |LCB1 |MORE
    Alias
    Function/Process
    Genetic Interactions
    Swain E, et al. (2002) Sterol-dependent regulation of sphingolipid metabolism in Saccharomyces cerevisiae. J Biol Chem 277(29):26177-84
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CCC2 |ERG26 |SCS7 |SUR2
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Regulatory Role
    Strains/Constructs
    Birchwood CJ, et al. (2001) Calcium influx and signaling in yeast stimulated by intracellular sphingosine 1-phosphate accumulation. J Biol Chem 276(15):11712-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CCH1 |DPL1 |LCB4 |LCB5 |MID1
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Regulatory Role
    Strains/Constructs
    Substrates/Ligands/Cofactors
    Zhang X, et al. (2001) Elevation of endogenous sphingolipid long-chain base phosphates kills Saccharomyces cerevisiae cells. Curr Genet 40(4):221-33
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPL1 |LCB4 |LCB5
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    de Groot PW, et al. (2001) A genomic approach for the identification and classification of genes involved in cell wall formation and its regulation in Saccharomyces cerevisiae. Comp Funct Genomics 2(3):124-42
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |AAD4 |AIM22 |ALG12 |ALK2 |ARE2 |ARG2 |ARP5 |ASI2 |ATG4 |ATG9 |AVL9 |AVT1 |AVT4 |BFA1 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Techniques and Reagents
    Kim S, et al. (2000) Accumulation of phosphorylated sphingoid long chain bases results in cell growth inhibition in Saccharomyces cerevisiae. Genetics 156(4):1519-29
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPL1 |LCB4 |LCB5 |SUR2 |YSR3
    Alias
    Fungal Related Genes/Proteins
    Non-Fungal Related Genes/Proteins
    Mandala SM, et al. (2000) Molecular cloning and characterization of a lipid phosphohydrolase that degrades sphingosine-1- phosphate and induces cell death. Proc Natl Acad Sci U S A 97(14):7859-64
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |YSR3
    Alias
    Function/Process
    Substrates/Ligands/Cofactors
    Techniques and Reagents
    Mao C and Obeid LM (2000) Yeast sphingosine-1-phosphate phosphatases: assay, expression, deletion, purification, and cellular localization by GFP tagging. Methods Enzymol 311:223-32
    SGD Papers Entry  Pubmed Entry  
    |YSR3
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Zanolari B, et al. (2000) Sphingoid base synthesis requirement for endocytosis in Saccharomyces cerevisiae. EMBO J 19(12):2824-33
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |LCB1 |LCB4 |LCB5 |SLA2 |YSR3
    Alias
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Dickson RC and Lester RL (1999) Metabolism and selected functions of sphingolipids in the yeast Saccharomyces cerevisiae. Biochim Biophys Acta 1438(3):305-21
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AUR1 |CSG2 |DPL1 |ERG2 |FAS2 |FEN1 |IPT1 |LCB1 |LCB2 |LCB4 |LCB5 |MSN2 |MSN4 |MSS4 |MORE
    Alias
    Cell Cycle Phase Involved
    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Mao C, et al. (1999) The dihydrosphingosine-1-phosphate phosphatases of Saccharomyces cerevisiae are important regulators of cell proliferation and heat stress responses. Biochem J 342 Pt 3():667-75
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |YSR3
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Skrzypek MS, et al. (1999) Analysis of phosphorylated sphingolipid long-chain bases reveals potential roles in heat stress and growth control in Saccharomyces. J Bacteriol 181(4):1134-40
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPL1
    Reviews
    Daum G, et al. (1998) Biochemistry, cell biology and molecular biology of lipids of Saccharomyces cerevisiae. Yeast 14(16):1471-510
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACC1 |ACP1 |AUR1 |CDS1 |CEM1 |CHO1 |CHO2 |CKI1 |CPT1 |CRD1 |CSG2 |DPL1 |DPP1 |EPT1 |MORE
    Reviews
    Dickson RC (1998) Sphingolipid functions in Saccharomyces cerevisiae: comparison to mammals. Annu Rev Biochem 67:27-48
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CSG2 |DPL1 |IPT1 |LCB1 |LCB2 |SAC1 |SUR2
    Alias
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Protein Sequence Features
    Strains/Constructs
    Substrates/Ligands/Cofactors
    Mandala SM, et al. (1998) Sphingoid base 1-phosphate phosphatase: a key regulator of sphingolipid metabolism and stress response. Proc Natl Acad Sci U S A 95(1):150-5
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |YSR3
    Alias
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Mao C, et al. (1997) Identification and characterization of Saccharomyces cerevisiae dihydrosphingosine-1-phosphate phosphatase. J Biol Chem 272(45):28690-4
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |YSR3
    DNA/RNA Sequence Features
    Function/Process
    Fungal Related Genes/Proteins
    Genetic Interactions
    Mutants/Phenotypes
    Protein Sequence Features
    Strains/Constructs
    Techniques and Reagents
    Qie L, et al. (1997) Identification of a Saccharomyces gene, LCB3, necessary for incorporation of exogenous long chain bases into sphingolipids. J Biol Chem 272(26):16110-7
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |YSR3
    DNA/RNA Sequence Features
    Mapping
    Strains/Constructs
    Katsoulou C, et al. (1996) Sequence analysis of a 40.7 kb segment from the left arm of yeast chromosome X reveals 14 known genes and 13 new open reading frames including homologues of genes clustered on the right arm of chromosome XI. Yeast 12(8):787-97
    SGD Papers Entry  Pubmed Entry  
    |INO1 |MRS3 |RPA34 |RPB4 |SNA3 |SNR128 |SNR190 |TIF2 |TIM17 |URA2 |VPS35 |YAK1 |YJL135W |YJL144W |MORE


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    SGDtm pages Database Copyright © 1997-2010 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.