EMP24/YGL200C Single Page Format |
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Contents
- Names and Identifiers
- GO Annotations
- Pathways
- Summary Paragraph
- Mutant Phenotypes
- Interactions
- Homologs
- Protein Info (physical properties, transcript info)
- PDB Homologs (protein structure info)
- Motifs
- Genome-wide Expression
(and other large-scale analyses)- Locus History (misc. notes)
- Sequence Retrieval and Analysis
- Map and Displays
- Localization
- Community Annotation
- Literature Guide
Sequence Coordinates
  ChrVII: 123310 to 122699
CDS: 123310 - 122699Click on map for expanded view
SGD ORF map GBrowse SGD Locus Page
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| Standard Name | Systematic Name | Alias | Feature Type | SGDID | ||||
| EMP24 | YGL200C | BST2 | ORF, Verified | S000003168 | ||||
| Description | ||||||||
| Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles, which function in ER to Golgi transport | ||||||||
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| No pathways available | |||||||||
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| No summary paragraph available | |||||||||
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| Phenotype page for EMP24/YGL200C | |||||||
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| Interaction page for EMP24/YGL200C | |||||||||
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MASFATKFVIACFLFFSASAHNVLLPAYGRRCFFEDLSKGDELSISFQFG
DRNPQSSSQLTGDFIIYGPERHEVLKTVRDTSHGEITLSAPYKGHFQYCF
LNENTGIETKDVTFNIHGVVYVDLDDPNTNTLDSAVRKLSKLTREVKDEQ
SYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIANSLFQIYYLRRFFEVT
SLV*
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| No protein structure information available. | |||||||||
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| You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses. | |||||
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| Nomenclature History |
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| Sequence Type | Output Format | ||||
| Genomic DNA | GCG | FASTA | NoHeader | ||||
| Genomic DNA with 1 kb up and downstream | GCG | FASTA | NoHeader | ||||
| DNA coding sequence (without introns, without flanking regions) | GCG | FASTA | NoHeader | ||||
| Protein Translation of ORF | GCG | FASTA | NoHeader | ||||
| 6-Frame Translation(with Restriction Map) | GCG | ||||
| Restriction Fragment Sizes | GCG | ||||
| Sequence from other databases | |
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| Sequence ID | Source |
| YGL200C | SGD Systematic Sequence |
| 852675 | NCBI: Gene ID |
| NP_011315.1 | NCBI: RefSeq protein version ID |
| NP_011315.1 | NCBI: RefSeq protein version ID |
| 6321238 | NCBI: NCBI protein GI |
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| Physical, Genetic Maps: | Chromosomal Feature Map | GBrowse | Combined Physical and Genetic Map | Genetic Distance vs. Physical Distance Ratios | ||||
| Similarity Viewers: | Synteny Viewer | Genomic Stripe View | SAGE Results Map |   | ||||
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| No community annotation available. | |||||||||
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| Topics | Reference | Other Genes Addressed | 41 curated references; 1 references not yet curated | |||
| Not yet curated | Kurbatova E, et al. (2009) p24 proteins play a role in peroxisome proliferation in yeast. FEBS Lett 583(19):3175-80 | |ERP3 | ||||
| Reviews | Nagotu S, et al. (2010) Divide et impera: the dictum of peroxisomes. Traffic 11(2):175-84 | |ARF1 |ARF3 |CAF4 |DNM1 |DSL1 |FIS1 |MDV1 |PEX11 |PEX2 |PEX3 |PEX30 |PEX31 |SEC20 |SEC39 |MORE | ||||
| Mutants/Phenotypes Strains/Constructs | Castillon GA, et al. (2009) Concentration of GPI-anchored proteins upon ER exit in yeast. Traffic 10(2):186-200 | |BST1 |CCW14 |CWP2 |ERV14 |GAP1 |GUP1 |HXT1 |HXT2 |MF(ALPHA)1 |MF(ALPHA)2 |MID2 |PER1 |SEC12 |SEC13 |MORE | ||||
| Function/Process Genetic Interactions Mutants/Phenotypes Protein-protein Interactions Strains/Constructs | Aguilera-Romero A, et al. (2008) The yeast p24 complex is required for the formation of COPI retrograde transport vesicles from the Golgi apparatus. J Cell Biol 180(4):713-20 | |ERV25 |GCS1 |GLO3 |IRE1 |KAR2 |RER1 |SEC21 |SEC23 |SEC27 | ||||
| Non-Fungal Related Genes/Proteins | Boltz KA and Carney GE (2008) Loss of p24 function in Drosophila melanogaster causes a stress response and increased levels of NF-kappaB-regulated gene products. BMC Genomics 9:212 | |ERP1 |ERP2 |ERP3 |ERP4 |ERP5 |ERP6 |ERV25 | ||||
| Reviews | Fujita M and Jigami Y (2008) Lipid remodeling of GPI-anchored proteins and its function. Biochim Biophys Acta 1780(3):410-20 | |BST1 |CDC42 |CWH43 |EGT2 |ERI1 |ERV25 |FUR4 |GAS1 |GPI10 |GUP1 |GWT1 |IRE1 |LAS21 |MCD4 |MORE | ||||
| Mutants/Phenotypes | Herrero AB, et al. (2008) Levels of SCS7/FA2H-Mediated Fatty Acid 2-Hydroxylation Determine the Sensitivity of Cells to Antitumor PM02734. Cancer Res 68(23):9779-87 | |AIM44 |ALD6 |ALG6 |API2 |APL1 |APL5 |APM3 |ATP15 |ATP4 |ATP5 |ATP7 |BRE5 |BST1 |CAT5 |MORE | ||||
| Non-Fungal Related Genes/Proteins | Hwang SO, et al. (2008) Novel Oxidative Stress-responsive Gene ERS25 Functions as a Regulator of the Heat-shock and Cell Death Response. J Biol Chem 283(19):13063-9 | |||||
| Protein Processing/Modification/Regulation RNA Levels and Processing | Liu Y and Chang A (2008) Heat shock response relieves ER stress. EMBO J 27(7):1049-59 | |ERV29 |GAS1 |HRD1 |HSF1 |HSP150 |IRE1 |KAR2 |PEP4 |PHO8 |PRC1 |SVP26 | ||||
| Reviews | Baines AC and Zhang B (2007) Receptor-mediated protein transport in the early secretory pathway. Trends Biochem Sci 32(8):381-8 | |EMP46 |EMP47 |ERV14 |ERV25 |ERV29 |ERV41 |ERV46 |SAR1 |SEC13 |SEC23 |SEC24 |SEC31 |SFB2 |SFB3 |MORE | ||||
| Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs | Haass FA, et al. (2007) Identification of yeast proteins necessary for cell-surface function of a potassium channel. Proc Natl Acad Sci U S A 104(46):18079-18084 | |BST1 |CSG2 |ERV14 |ERV25 |SUR4 |TED1 | ||||
| DNA/RNA Sequence Features RNA Levels and Processing Regulation of | Wang D, et al. (2007) Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors. Genome Res 17(8):1161-9 | |ADH6 |AFG1 |APP1 |ARG8 |BNA2 |CAR2 |CHO2 |CRP1 |DIS3 |DYN1 |ERS1 |GPM1 |HEM1 |HMG1 |MORE | ||||
| RNA Levels and Processing Regulation of | Tanaka F, et al. (2006) Functional genomic analysis of commercial baker's yeast during initial stages of model dough-fermentation. Food Microbiol 23(8):717-28 | |ACE2 |ACO1 |ACS1 |ACS2 |ACT1 |ADH1 |ADH2 |ADH5 |ADK1 |AIM38 |ALD2 |ALG8 |ARG1 |ARG3 |MORE | ||||
| Cellular Location | Inadome H, et al. (2005) Immunoisolaton of the yeast Golgi subcompartments and characterization of a novel membrane protein, Svp26, discovered in the Sed5-containing compartments. Mol Cell Biol 25(17):7696-710 | |AKR1 |ANP1 |ARF1 |ATG27 |DPM1 |EHT1 |EMP47 |ERP1 |ERP2 |ERV14 |ERV25 |ERV41 |ERV46 |GCS1 |MORE | ||||
| Protein-protein Interactions | Miller JP, et al. (2005) Large-scale identification of yeast integral membrane protein interactions. Proc Natl Acad Sci U S A 102(34):12123-8 | |ARV1 |EMP46 |EMP47 |ERD1 |ERD2 |ERG11 |ERP5 |ERV29 |ERV41 |MST27 |PHO84 |PHO88 |SEC61 |SHR3 |MORE | ||||
| Function/Process Genetic Interactions | Schuldiner M, et al. (2005) Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Cell 123(3):507-19 ![]() | |ALG12 |ALG3 |ALG5 |ALG6 |ALG8 |ALG9 |API2 |APL5 |APL6 |APM3 |APS3 |ARL1 |ARL3 |ARV1 |MORE | ||||
| Reviews | Bonifacino JS and Glick BS (2004) The mechanisms of vesicle budding and fusion. Cell 116(2):153-66 | |BET1 |EMP46 |EMP47 |ERV25 |ERV41 |GAP1 |SAR1 |SEC12 |SEC13 |SEC16 |SEC17 |SEC18 |SEC23 |SEC24 |MORE | ||||
| Mutants/Phenotypes Regulatory Role Strains/Constructs | Gillingham AK, et al. (2004) The GTPase Arf1p and the ER to Golgi cargo receptor Erv14p cooperate to recruit the golgin Rud3p to the cis-Golgi. J Cell Biol 167(2):281-92 | |ARF1 |ARF3 |ARL1 |EMP47 |ERV14 |ERV29 |ERV46 |RER1 |RUD3 |YIP3 |YPT1 |YPT31 |YPT32 |YPT6 | ||||
| Genetic Interactions Strains/Constructs | Tong AH, et al. (2004) Global mapping of the yeast genetic interaction network. Science 303(5659):808-13 | |AAD4 |AAH1 |ABF2 |ACE2 |ADH6 |AEP2 |AFG1 |AGP1 |AHC1 |AHC2 |AIM21 |AIM22 |AIM26 |AIM29 |MORE | ||||
| Non-Fungal Related Genes/Proteins | Carney GE and Taylor BJ (2003) Logjam encodes a predicted EMP24/GP25 protein that is required for Drosophila oviposition behavior. Genetics 164(1):173-86 | |||||
| Regulation of | Miller EA, et al. (2003) Multiple cargo binding sites on the COPII subunit Sec24p ensure capture of diverse membrane proteins into transport vesicles. Cell 114(4):497-509 | |BET1 |BOS1 |EMP47 |ERP1 |ERP2 |GAP1 |PRM8 |SEC13 |SEC22 |SEC23 |SEC24 |SEC31 |SED5 |SFB2 |MORE | ||||
| Fungal Related Genes/Proteins Non-Fungal Related Genes/Proteins Protein Sequence Features | Anantharaman V and Aravind L (2002) The GOLD domain, a novel protein module involved in Golgi function and secretion. Genome Biol 3(5):research0023 | |ERP1 |ERP2 |ERP6 |ERV25 |OSH3 |UPS1 |UPS2 |UPS3 | ||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Belden WJ and Barlowe C (2001) Deletion of yeast p24 genes activates the unfolded protein response. Mol Biol Cell 12(4):957-69 | |ERD2 |ERV25 |IRE1 |KAR2 | ||||
| Cellular Location Function/Process Genetic Interactions Mutants/Phenotypes Protein-protein Interactions Strains/Constructs | Belden WJ and Barlowe C (2001) Distinct roles for the cytoplasmic tail sequences of Emp24p and Erv25p in transport between the endoplasmic reticulum and Golgi complex. J Biol Chem 276(46):43040-8 | |ERP1 |ERP2 |ERV25 |SEC13 |SEC31 | ||||
| Cellular Location Function/Process Protein-protein Interactions Techniques and Reagents | Otte S, et al. (2001) Erv41p and Erv46p: new components of COPII vesicles involved in transport between the ER and Golgi complex. J Cell Biol 152(3):503-18 | |BET1 |EMP47 |ERP1 |ERP2 |ERV14 |ERV25 |ERV29 |ERV41 |ERV46 |RER1 |YIF1 |YIP3 |YPT1 | ||||
| Cellular Location | Cho JH, et al. (2000) Proteins in the early golgi compartment of Saccharomyces cerevisiae immunoisolated by Sed5p. FEBS Lett 469(2-3):151-4 | |ANP1 |ERP1 |ERV25 |ERV41 |KEX2 |KRE2 |MNN9 |SEC66 |SED5 |VAN1 |YPT52 | ||||
| Function/Process Protein Physical Properties Protein-protein Interactions | Ciufo LF and Boyd A (2000) Identification of a lumenal sequence specifying the assembly of Emp24p into p24 complexes in the yeast secretory pathway. J Biol Chem 275(12):8382-8 | |ERV25 | ||||
| Reviews | Kaiser C (2000) Thinking about p24 proteins and how transport vesicles select their cargo. Proc Natl Acad Sci U S A 97(8):3783-5 | |ERP1 |ERP2 |ERP3 |ERP4 |ERP5 |ERP6 |ERV25 | ||||
| Cellular Location Function/Process Mutants/Phenotypes Protein Sequence Features Protein-protein Interactions Strains/Constructs Techniques and Reagents | Muniz M, et al. (2000) The Emp24 complex recruits a specific cargo molecule into endoplasmic reticulum-derived vesicles. J Cell Biol 148(5):925-30 | |ERV25 |GAP1 |GAS1 |KAR2 | ||||
| Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs | Springer S, et al. (2000) The p24 proteins are not essential for vesicular transport in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 97(8):4034-9 | |ERP1 |ERP2 |ERP3 |ERP4 |ERP5 |ERP6 |ERV25 |GAS1 | ||||
| Fungal Related Genes/Proteins Genetic Interactions Mutants/Phenotypes Protein-protein Interactions | Marzioch M, et al. (1999) Erp1p and Erp2p, partners for Emp24p and Erv25p in a yeast p24 complex. Mol Biol Cell 10(6):1923-38 | |ERP1 |ERP2 |ERP3 |ERP4 |ERP5 |ERP6 |ERV25 |GAS1 |KAR2 |SEC13 | ||||
| Non-Fungal Related Genes/Proteins | Dominguez M, et al. (1998) gp25L/emp24/p24 protein family members of the cis-Golgi network bind both COP I and II coatomer. J Cell Biol 140(4):751-65 | |SEC23 | ||||
| Cellular Location | Kuehn MJ, et al. (1998) COPII-cargo interactions direct protein sorting into ER-derived transport vesicles. Nature 391(6663):187-90 | |BET1 |KAR2 |SAR1 |SEC23 |SHR3 | ||||
| Reviews | Lippincott-Schwartz J, et al. (1998) Building a secretory apparatus: role of ARF1/COPI in Golgi biogenesis and maintenance. Histochem Cell Biol 109(5-6):449-62 | |ARF1 |COP1 |RET2 |RET3 |SAR1 |SEC13 |SEC21 |SEC23 |SEC24 |SEC26 |SEC27 |SEC28 |SEC31 | ||||
| Cellular Location Mutants/Phenotypes Protein Sequence Features Strains/Constructs | Nakamura N, et al. (1998) Identification of potential regulatory elements for the transport of Emp24p. Mol Biol Cell 9(12):3493-503 | |WBP1 | ||||
| Protein Processing/Modification/Regulation Protein-protein Interactions Regulation of | Campbell JL and Schekman R (1997) Selective packaging of cargo molecules into endoplasmic reticulum-derived COPII vesicles. Proc Natl Acad Sci U S A 94(3):837-42 | |SAR1 |SEC12 |SEC13 |SEC16 |SEC22 |SEC23 |SEC24 |SEC31 | ||||
| Mapping | Coglievina M, et al. (1997) Sequencing of a 40.5 kb fragment located on the left arm of chromosome VII from Saccharomyces cerevisiae. Yeast 13(1):55-64 | |CDC55 |COX13 |COX4 |DSD1 |GCN1 |GTS1 |IME4 |RPS26A |RPS26B |STR3 |YGL182C |YGL185C |YGL193C |YGL199C | ||||
| Cellular Location Fungal Related Genes/Proteins Genetic Interactions Mutants/Phenotypes Protein Processing/Modification/Regulation Protein-protein Interactions Strains/Constructs | Belden WJ and Barlowe C (1996) Erv25p, a component of COPII-coated vesicles, forms a complex with Emp24p that is required for efficient endoplasmic reticulum to Golgi transport. J Biol Chem 271(43):26939-46 | |ERV25 | ||||
| Non-Fungal Related Genes/Proteins | Blum R, et al. (1996) Tmp21 and p24A, two type I proteins enriched in pancreatic microsomal membranes, are members of a protein family involved in vesicular trafficking. J Biol Chem 271(29):17183-9 | |||||
| Cellular Location Genetic Interactions | Elrod-Erickson MJ and Kaiser CA (1996) Genes that control the fidelity of endoplasmic reticulum to Golgi transport identified as suppressors of vesicle budding mutations. Mol Biol Cell 7(7):1043-58 | |BST1 |BST3 |KAR2 |PDI1 |SEC13 | ||||
| Cellular Location Function/Process Mutants/Phenotypes Protein Physical Properties Techniques and Reagents | Schimmoller F, et al. (1995) The absence of Emp24p, a component of ER-derived COPII-coated vesicles, causes a defect in transport of selected proteins to the Golgi. EMBO J 14(7):1329-39 | |GAS1 | ||||
| Other Features Techniques and Reagents | Singer-Kruger B, et al. (1993) Partial purification and characterization of early and late endosomes from yeast. Identification of four novel proteins. J Biol Chem 268(19):14376-86 | |EMP70 | ||||
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