| EUG1/YDR518W Single Page Format | |
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| PDB protein structure(s) homologous to EUG1 | Homolog Source (per PDB) | Protein Alignment: EUG1 vs. Homolog | External Links |
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| P-Value | %Identical | %Similar | Alignment |
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2b5e ( Chain: A) Crystal structure of yeast protein disulfide isomerase | PDB_InfoPDB_Structure | Saccharomyces cerevisiae | 2.6e-78 | 42 | 30 | View alignment | SCOP MMDB CATH | 3boa ( Chain: A) Crystal structure of yeast protein disulfide isomerase. | PDB_InfoPDB_Structure | Saccharomyces cerevisiae | 2.6e-78 | 42 | 30 | View alignment | SCOP MMDB CATH | 3f8u ( Chain: A, C) Tapasin/erp57 heterodimer | PDB_InfoPDB_Structure | Homo sapiens | Chain A = 2.0e-30 | 28 | 33 | View alignment | SCOP MMDB CATH | | Chain C = 2.0e-30 | 28 | 33 | View alignment | 2djj ( Chain: A) Solution structure of the a' domain of thermophilic fungal protein disulfide isomerase | PDB_InfoPDB_Structure | Humicola insolens | 2.6e-15 | 42 | 35 | View alignment | SCOP MMDB CATH | 2dmm ( Chain: A) The solution structure of the second thioredoxin domain of human protein disulfide-isomerase a3 | PDB_InfoPDB_Structure | Homo sapiens | 8.9e-12 | 36 | 35 | View alignment | SCOP MMDB CATH | 2alb ( Chain: A) Nmr structure of the n-terminal domain a of the glycoprotein chaperone erp57 | PDB_InfoPDB_Structure | Synthetic: yes; other_details: this sequence occurs naturally in humans | 1.7e-10 | 43 | 25 | View alignment | SCOP MMDB CATH | 2dj3 ( Chain: A) The solution structure of the third thioredoxin domain of mouse protein disulfide-isomerase a4 | PDB_InfoPDB_Structure | Mus musculus | 3.4e-10 | 41 | 29 | View alignment | SCOP MMDB CATH | 2r2j ( Chain: A) Crystal structure of human erp44 | PDB_InfoPDB_Structure | Homo sapiens | 5.7e-10 | 24 | 32 | View alignment | SCOP MMDB CATH | 1x5c ( Chain: A) The solution structure of the second thioredoxin-like domain of human protein disulfide-isomerase | PDB_InfoPDB_Structure | Homo sapiens | 5.8e-09 | 34 | 38 | View alignment | SCOP MMDB CATH | 2djk ( Chain: A) Solution structure of the b' domain of thermophilic fungal protein disulfide isomerase | PDB_InfoPDB_Structure | Humicola insolens | 1.5e-08 | 30 | 31 | View alignment | SCOP MMDB CATH | 2dj2 ( Chain: A) The solution structure of the second thioredoxin domain of mouse protein disulfide-isomerase a4 | PDB_InfoPDB_Structure | Mus musculus | 4.5e-08 | 36 | 33 | View alignment | SCOP MMDB CATH | 2dj1 ( Chain: A) The solution structure of the first thioredoxin domain of mouse protein disulfide-isomerase a4 | PDB_InfoPDB_Structure | Mus musculus | 8.8e-08 | 38 | 29 | View alignment | SCOP MMDB CATH | 1mek ( Chain: A) Human protein disulfide isomerase, nmr, 40 structures | PDB_InfoPDB_Structure | Homo sapiens | 1.5e-06 | 32 | 33 | View alignment | SCOP MMDB CATH | 1x5d ( Chain: A) The solution structure of the second thioredoxin-like domain of human protein disulfide-isomerase a6 | PDB_InfoPDB_Structure | Homo sapiens | 1.7e-05 | 32 | 35 | View alignment | SCOP MMDB CATH | 2diz ( Chain: A) The solution structure of the third thioredoxin domain of human thioredoxin domain-containing protein 5 | PDB_InfoPDB_Structure | Homo sapiens | 2.6e-05 | 34 | 35 | View alignment | SCOP MMDB CATH | 3ed3 ( Chain: A, B) Crystal structure of the yeast dithiol/disulfide oxidoreductase mpd1p | PDB_InfoPDB_Structure | Saccharomyces cerevisiae | Chain A = 4.4e-05 | 26 | 29 | View alignment | SCOP MMDB CATH | | Chain B = 4.4e-05 | 26 | 29 | View alignment | 2dml ( Chain: A) The solution structure of the first thioredoxin domain of mouse protein disulfide-isomerase a6 | PDB_InfoPDB_Structure | Mus musculus | 0.000210 | 37 | 30 | View alignment | SCOP MMDB CATH | 2i1u ( Chain: A) Mycobacterium tuberculosis thioredoxin c | PDB_InfoPDB_Structure | Mycobacterium tuberculosis | 0.000259 | 34 | 26 | View alignment | SCOP MMDB CATH | 1syr ( Chain: B, H, A, F, L, K, D, G, I, J, C, E) Initial structural analysis of plasmodium falciparum thioredoxin | PDB_InfoPDB_Structure | Plasmodium falciparum 3D7 | Chain B = 0.000420 | 29 | 32 | View alignment | SCOP MMDB CATH | | Chain H = 0.000420 | 29 | 32 | View alignment | | Chain A = 0.000420 | 29 | 32 | View alignment | | Chain F = 0.000420 | 29 | 32 | View alignment | | Chain L = 0.000420 | 29 | 32 | View alignment | | Chain K = 0.000420 | 29 | 32 | View alignment | | Chain D = 0.000420 | 29 | 32 | View alignment | | Chain G = 0.000420 | 29 | 32 | View alignment | | Chain I = 0.000420 | 29 | 32 | View alignment | | Chain J = 0.000420 | 29 | 32 | View alignment | | Chain C = 0.000420 | 29 | 32 | View alignment | | Chain E = 0.000420 | 29 | 32 | View alignment | 2yzu ( Chain: A) Crystal structure of oxidized thioredoxin from thermus thermophilus hb8 | PDB_InfoPDB_Structure | Thermus thermophilus HB8 | 0.000469 | 33 | 34 | View alignment | SCOP MMDB CATH | 2cvk ( Chain: A) Crystal structure of thermus thermophilus thioredoxin | PDB_InfoPDB_Structure | Thermus thermophilus | 0.000479 | 33 | 34 | View alignment | SCOP MMDB CATH | 2puk ( Chain: G, C) Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin m | PDB_InfoPDB_Structure | Synechocystis sp. | Spinacia oleracea | Chain G = 0.002299 | 31 | 34 | View alignment | SCOP MMDB CATH | | Chain C = 0.002299 | 31 | 34 | View alignment | 1v98 ( Chain: B, A) Crystal structure analysis of thioredoxin from thermus thermophilus | PDB_InfoPDB_Structure | Thermus thermophilus HB8 | Chain B = 0.002900 | 32 | 27 | View alignment | SCOP MMDB CATH | | Chain A = 0.002900 | 32 | 27 | View alignment | 2o89 ( Chain: A) S. aureus thioredoxin p31t/c32s mutant | PDB_InfoPDB_Structure | Staphylococcus aureus | 0.003701 | 32 | 29 | View alignment | SCOP MMDB CATH | 1quw ( Chain: A) Solution structure of the thioredoxin from bacillus acidocaldarius | PDB_InfoPDB_Structure | Alicyclobacillus acidocaldarius | 0.004897 | 35 | 29 | View alignment | SCOP MMDB CATH | 1gl8 ( Chain: A) Solution structure of thioredoxin m from spinach, oxidized form | PDB_InfoPDB_Structure | Spinacia oleracea | 0.005599 | 30 | 34 | View alignment | SCOP MMDB CATH | 1nsw ( Chain: C, A, B, D) The crystal structure of the k18g mutant of the thioredoxin from alicyclobacillus acidocaldarius | PDB_InfoPDB_Structure | Alicyclobacillus acidocaldarius | Chain C = 0.005701 | 35 | 29 | View alignment | SCOP MMDB CATH | | Chain A = 0.005701 | 35 | 29 | View alignment | | Chain B = 0.005701 | 35 | 29 | View alignment | | Chain D = 0.005701 | 35 | 29 | View alignment | 1fb6 ( Chain: A, B) Crystal structure of thioredoxin m from spinach chloroplast (oxidized form) | PDB_InfoPDB_Structure | Spinacia oleracea | Chain A = 0.005701 | 30 | 34 | View alignment | SCOP MMDB CATH | | Chain B = 0.005701 | 30 | 34 | View alignment | 1fb0 ( Chain: B, A) Crystal structure of thioredoxin m from spinach chloroplast (reduced form) | PDB_InfoPDB_Structure | Spinacia oleracea | Chain B = 0.005701 | 30 | 34 | View alignment | SCOP MMDB CATH | | Chain A = 0.005701 | 30 | 34 | View alignment | 2o87 ( Chain: A) S. aureus thioredoxin p31s mutant | PDB_InfoPDB_Structure | Staphylococcus aureus | 0.005701 | 33 | 28 | View alignment | SCOP MMDB CATH | 1w89 ( Chain: F, D, C, E, A, B) Structure of the reduced form of human thioredoxin 2 | PDB_InfoPDB_Structure | Homo sapiens | Chain F = 0.005799 | 29 | 35 | View alignment | SCOP MMDB CATH | | Chain D = 0.005799 | 29 | 35 | View alignment | | Chain C = 0.005799 | 29 | 35 | View alignment | | Chain E = 0.005799 | 29 | 35 | View alignment | | Chain A = 0.005799 | 29 | 35 | View alignment | | Chain B = 0.005799 | 29 | 35 | View alignment | 1w4v ( Chain: A, B, C, E, F, D) Structure of the oxidised form of human thioredoxin 2 | PDB_InfoPDB_Structure | Homo sapiens | Chain A = 0.005799 | 29 | 35 | View alignment | SCOP MMDB CATH | | Chain B = 0.005799 | 29 | 35 | View alignment | | Chain C = 0.005799 | 29 | 35 | View alignment | | Chain E = 0.005799 | 29 | 35 | View alignment | | Chain F = 0.005799 | 29 | 35 | View alignment | | Chain D = 0.005799 | 29 | 35 | View alignment | 1uvz ( Chain: C, A, D, F, B, E) Structure of human thioredoxin 2 | PDB_InfoPDB_Structure | Homo sapiens | Chain C = 0.005799 | 29 | 35 | View alignment | SCOP MMDB CATH | | Chain A = 0.005799 | 29 | 35 | View alignment | | Chain D = 0.005799 | 29 | 35 | View alignment | | Chain F = 0.005799 | 29 | 35 | View alignment | | Chain B = 0.005799 | 29 | 35 | View alignment | | Chain E = 0.005799 | 29 | 35 | View alignment | 2ipa ( Chain: A) Solution structure of trx-arsc complex | PDB_InfoPDB_Structure | Bacillus subtilis | 0.006499 | 30 | 34 | View alignment | SCOP MMDB CATH | 2voc ( Chain: A, B) Thioredoxin a active site mutants form mixed disulfide dimers that resemble enzyme-substrate reaction intermediate | PDB_InfoPDB_Structure | Bacillus subtilis | Chain A = 0.007197 | 30 | 34 | View alignment | SCOP MMDB CATH | | Chain B = 0.007197 | 30 | 34 | View alignment | 2o85 ( Chain: A) S. aureus thioredoxin p31t mutant | PDB_InfoPDB_Structure | Staphylococcus aureus | 0.009104 | 31 | 29 | View alignment | SCOP MMDB CATH | 2o7k ( Chain: A) S. aureus thioredoxin | PDB_InfoPDB_Structure | Staphylococcus aureus | 0.009104 | 31 | 29 | View alignment | SCOP MMDB CATH |
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| Topics | Reference | Other Genes Addressed |
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23 curated references; 0 references not yet curated | Reviews
| Hatahet F, et al. (2009) Protein disulfide isomerase: a critical evaluation of its function in disulfide bond formation. Antioxid Redox Signal 11(11):2807-50
| |EPS1 |MPD1 |MPD2 |PDI1 |
Mutants/Phenotypes Regulation of
| Kim JH, et al. (2009) The unfolded protein response is necessary but not sufficient to compensate for defects in disulfide isomerization. J Biol Chem 284(16):10400-8
| |ALG8 |APM3 |APS3 |ARL1 |AVL9 |CCZ1 |CDC50 |COG8 |EPS1 |ERV41 |ERV46 |FLD1 |GCS1 |GEF1 |MORE |
Fungal Related Genes/Proteins Non-Fungal Related Genes/Proteins Protein Sequence Features
| Marino SM and Gladyshev VN (2009) A structure-based approach for detection of thiol oxidoreductases and their catalytic redox-active cysteine residues. PLoS Comput Biol 5(5):e1000383
| |AHP1 |BET3 |CAP2 |DOT5 |EPS1 |ERO1 |ERV1 |ERV2 |GLR1 |GPX1 |GPX2 |GRX1 |GRX2 |GRX3 |MORE |
Mutants/Phenotypes
| Shima J, et al. (2008) Possible roles of vacuolar H(+)-ATPase and mitochondrial function in tolerance to air-drying stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains. Yeast 25(3):179-90
| |ADA2 |ADK1 |ADO1 |AEP2 |AFG3 |ANP1 |APQ13 |ARF1 |ARG82 |ARV1 |ATG17 |ATP17 |BDF1 |BEM1 |MORE |
Regulation of
| Wu WS and Li WH (2008) Identifying gene regulatory modules of heat shock response in yeast. BMC Genomics 9:439
| |ADD37 |AFR1 |AGX1 |AHA1 |AIM17 |ALD4 |ALG13 |ARA1 |ASI1 |ATG12 |ATG8 |BAG7 |BDH1 |CAD1 |MORE |
RNA Levels and Processing
| Cullen PJ, et al. (2006) Genome-wide analysis of the response to protein glycosylation deficiency in yeast. FEMS Yeast Res 6(8):1264-73
| |ACS1 |ADR1 |ALD6 |AMS1 |CHS1 |CHS3 |CHS7 |CLB1 |CLB2 |CLN1 |CLN2 |CLN3 |CTT1 |DER1 |MORE |
Reviews
| Gruber CW, et al. (2006) Protein disulfide isomerase: the structure of oxidative folding. Trends Biochem Sci 31(8):455-64
| |EPS1 |ERO1 |ERV2 |MPD1 |MPD2 |PDI1 |
Protein-protein Interactions Protein/Nucleic Acid Structure
| Kimura T, et al. (2005) Interactions among Yeast Protein-Disulfide Isomerase Proteins and Endoplasmic Reticulum Chaperone Proteins Influence Their Activities. J Biol Chem 280(36):31438-41
| |CNE1 |EPS1 |KAR2 |MPD1 |MPD2 |PDI1 |
RNA Levels and Processing Regulation of
| Lai LC, et al. (2005) Dynamical remodeling of the transcriptome during short-term anaerobiosis in Saccharomyces cerevisiae: differential response and role of Msn2 and/or Msn4 and other factors in galactose and glucose media. Mol Cell Biol 25(10):4075-91
| |AAC1 |ADE1 |ADE12 |ADE17 |ADE4 |AFR1 |AIM17 |AIM3 |AKR1 |AKR2 |ALA1 |ALD5 |ARE1 |ARN1 |MORE |
Function/Process Protein Physical Properties Protein Sequence Features Strains/Constructs Substrates/Ligands/Cofactors
| Kimura T, et al. (2004) Functional differences between human and yeast protein disulfide isomerase family proteins. Biochem Biophys Res Commun 320(2):359-65
| |MPD1 |MPD2 |PDI1 |
Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs
| Xiao R, et al. (2004) The contributions of protein disulfide isomerase and its homologues to oxidative protein folding in the yeast endoplasmic reticulum. J Biol Chem 279(48):49780-6
| |EPS1 |MPD1 |MPD2 |PDI1 |
Function/Process Mutants/Phenotypes
| Dimmer KS, et al. (2002) Genetic basis of mitochondrial function and morphology in Saccharomyces cerevisiae. Mol Biol Cell 13(3):847-53
| |ABF2 |ACO1 |ADA2 |ADK1 |AEP1 |AEP2 |AEP3 |AFG3 |AFT1 |AIM10 |AIM22 |ALY1 |APQ13 |ARG82 |MORE |
RNA Levels and Processing Regulation of
| Alexandre H, et al. (2001) Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae. FEBS Lett 498(1):98-103
| |AHP1 |ALD2 |ALD4 |APJ1 |ATG8 |CCC2 |CDC19 |CIT1 |CIT2 |CPR6 |CTT1 |DAK1 |EMI2 |ERO1 |MORE |
Function/Process Protein Sequence Features
| Fetrow JS, et al. (2001) Genomic-scale comparison of sequence- and structure-based methods of function prediction: does structure provide additional insight? Protein Sci 10(5):1005-14
| |CDD1 |EPS1 |ERF2 |GRX1 |GRX2 |GRX3 |GRX4 |GRX5 |GRX6 |GRX7 |GRX8 |LEU5 |MPD1 |MPD2 |MORE |
Function/Process Mutants/Phenotypes Protein Sequence Features Strains/Constructs Substrates/Ligands/Cofactors
| Norgaard P and Winther JR (2001) Mutation of yeast Eug1p CXXS active sites to CXXC results in a dramatic increase in protein disulphide isomerase activity. Biochem J 358(Pt 1):269-74
| |PDI1 |
Function/Process Fungal Related Genes/Proteins Genetic Interactions Mutants/Phenotypes Strains/Constructs
| Norgaard P, et al. (2001) Functional differences in yeast protein disulfide isomerases. J Cell Biol 152(3):553-62
| |EPS1 |MPD1 |MPD2 |PDI1 |
Fungal Related Genes/Proteins
| Bao WG, et al. (2000) Protein disulphide isomerase genes of Kluyveromyces lactis. Yeast 16(4):329-41
| |MPD1 |PDI1 |
Regulation of
| Travers KJ, et al. (2000) Functional and genomic analyses reveal an essential coordination between the unfolded protein response and ER-associated degradation. Cell 101(3):249-58
| |ERO1 |FPR2 |INO1 |IRE1 |KAR2 |LHS1 |OPI1 |PDI1 |
Cellular Location Function/Process Genetic Interactions Mutants/Phenotypes Protein Sequence Features Strains/Constructs
| Frand AR and Kaiser CA (1999) Ero1p oxidizes protein disulfide isomerase in a pathway for disulfide bond formation in the endoplasmic reticulum. Mol Cell 4(4):469-77
| |ERO1 |MPD2 |PDI1 |
DNA/RNA Sequence Features Regulation of Transcription
| Mori K, et al. (1998) Palindrome with spacer of one nucleotide is characteristic of the cis-acting unfolded protein response element in Saccharomyces cerevisiae. J Biol Chem 273(16):9912-20
| |FPR2 |HAC1 |KAR2 |LHS1 |PDI1 |SCJ1 |
Function/Process Genetic Interactions Mutants/Phenotypes Protein Sequence Features Strains/Constructs
| Holst B, et al. (1997) Active site mutations in yeast protein disulfide isomerase cause dithiothreitol sensitivity and a reduced rate of protein folding in the endoplasmic reticulum. J Cell Biol 138(6):1229-38
| |PDI1 |
Cellular Location Function/Process
| Webster PA, et al. (1995) Properties and cellular functions of related yeast ER proteins protein disulphide-isomerase and Eug1p. Biochem Soc Trans 23(1):66S
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Cellular Location Function/Process Fungal Related Genes/Proteins Genetic Interactions Mutants/Phenotypes Non-Fungal Related Genes/Proteins RNA Levels and Processing Strains/Constructs
| Tachibana C and Stevens TH (1992) The yeast EUG1 gene encodes an endoplasmic reticulum protein that is functionally related to protein disulfide isomerase. Mol Cell Biol 12(10):4601-11
| |PDI1 |