MTR2/YKL186C Single Page Format

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SGD Locus Page

Names and Identifiers [TOP] [NEXT] Help
Standard Name Systematic Name Alias Feature Type SGDID
MTR2 YKL186C   ORF, Verified S000001669
Description
mRNA transport regulator, essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA

GO Annotations [TOP] [NEXT] Help
Molecular Function
Annotation(s)Reference(s)EvidenceAssigned By
protein bindingStrasser K, et al. (2000) Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export. J Cell Biol 150(4):695-706
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-09-16
SGD
Biological Process
Annotation(s)Reference(s)EvidenceAssigned By
establishment of protein localizationHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
poly(A)+ mRNA export from nucleusKadowaki T, et al. (1994) Nuclear mRNA accumulation causes nucleolar fragmentation in yeast mtr2 mutant. Mol Biol Cell 5(11):1253-63
SGD Papers Entry  Pubmed Entry  
IMP : Inferred from Mutant Phenotype
Assigned on 2002-09-16
SGD
Santos-Rosa H, et al. (1998) Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores. Mol Cell Biol 18(11):6826-38
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction
IMP : Inferred from Mutant Phenotype
Assigned on 2002-09-16
SGD
ribosomal large subunit export from nucleusYao W, et al. (2007) Nuclear Export of Ribosomal 60S Subunits by the General mRNA Export Receptor Mex67-Mtr2. Mol Cell 26(1):51-62
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
IGI : Inferred from Genetic Interaction with SGD:NMD3
Assigned on 2007-08-01
SGD
ribosomal subunit export from nucleusHuttenhower C and Troyanskaya OG (2009) Prediction of Gene Ontology annotations by integrating high-throughput datasets
SGD Papers Entry  
RCA : Reviewed Computational Analysis
Assigned on 2009-08-06
bioPIXIE_MEFIT
transportGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0813
Assigned on 2007-05-23
UniProtKB
Cellular Component
Annotation(s)Reference(s)EvidenceAssigned By
nuclear RNA export factor complexSantos-Rosa H, et al. (1998) Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores. Mol Cell Biol 18(11):6826-38
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IPI : Inferred from Physical Interaction with SGD:MEX67
Assigned on 2007-08-01
SGD
nuclear poreSantos-Rosa H, et al. (1998) Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores. Mol Cell Biol 18(11):6826-38
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-09-16
SGD
nucleusGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0539
Assigned on 2007-05-23
UniProtKB
GOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-0191
Assigned on 2008-02-13
UniProtKB

Pathways [TOP] [NEXT] Help
No pathways available

Summary Paragraph [TOP] [NEXT] Help
No summary paragraph available

Basic References [TOP]   Help
BASIC INFORMATION REFERENCES forMTR2/YKL186C for MTR2
1)Kadowaki T, et al. (1994) Nuclear mRNA accumulation causes nucleolar fragmentation in yeast mtr2 mutant. Mol Biol Cell 5(11):1253-63
SGD Papers Entry  Pubmed Entry  
2)Kadowaki T, et al. (1994) Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants. J Cell Biol 126(3):649-59
SGD Papers Entry  Pubmed Entry  

Mutant Phenotypes [TOP] [NEXT] Help
Phenotype page for MTR2/YKL186C

Interactions: genetic, physical, and other gene-gene links. [TOP] [NEXT] Help
Interaction page for MTR2/YKL186C

Homologs [TOP] [NEXT] Help
  • Comparison Resources
  • Physical Properties and Transcript Information: predicted from sequence [TOP] [NEXT] Help
    Protein Sequence Calculations
    from Predicted Full length Translation
    N-term MNTNSNT
    C-term EDSLLKI
    Length(aa) 184
    MW(Da) 20,783
    pI 7.93
    Amino Acid Composition (full length)
    GCG tools: PepPlot, Helical Wheel, PepStruct

    Transcript Translation Calculations
    Codon Bias 0.041  
    Codon Adaptation Index 0.112  
    Frequency of Optimal Codons 0.446  
    Hydropathicity of Protein -0.414  
    Aromaticity Score 0.092  

                              10        20        30        40        50
                               |         |         |         |         |
                      MNTNSNTMVMNDANQAQITATFTKKILAHLDDPDSNKLAQFVQLFNPNNC
                      RIIFNATPFAQATVFLQMWQNQVVQTQHALTGVDYHAIPGSGTLICNVNC
                      KVRFDESGRDKMGQDATVPIQPNNTGNRNRPNDMNKPRPLWGPYFGISLQ
                      LIIDDRIFRNDFNGVISGFNYNMVYKPEDSLLKI*
    

    Protein Structures from PDB: proteins of known structure with sequence similarity to MTR2/YKL186C, based on Smith-Waterman analysis. [TOP] [NEXT] Help
    PDB protein structure(s) homologous to MTR2Homolog Source (per PDB)Protein Alignment: MTR2 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1of5 ( Chain: B)
    Crystal structure of mex67-mtr2
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae4.6e-911000View alignmentSCOP
    MMDB
    CATH
    1q40 ( Chain: A, C)
    Crystal structure of the c. albicans mtr2-mex67 m domain complex
  • PDB_Info
  • PDB_Structure
  • Candida albicansChain A = 5.3e-163333View alignmentSCOP
    MMDB
    CATH
    Chain C = 5.3e-163333View alignment
    1q42 ( Chain: A)
    Crystal structure analysis of the candida albicans mtr2
  • PDB_Info
  • PDB_Structure
  • Candida albicans5.3e-163333View alignmentSCOP
    MMDB
    CATH

    Genome-wide Expression and Other Large-Scale Analyses [TOP] [NEXT] Help
  • Functional Analysis
  • You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses.

    Locus History (misc. notes) [TOP] [NEXT] Help
    Nomenclature History
    Standard NameReference
    MTR2Kadowaki T, et al. (1994) Nuclear mRNA accumulation causes nucleolar fragmentation in yeast mtr2 mutant. Mol Biol Cell 5(11):1253-63
    SGD Papers Entry  Pubmed Entry  
    Kadowaki T, et al. (1994) Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants. J Cell Biol 126(3):649-59
    SGD Papers Entry  Pubmed Entry  
    Sequence Annotation Notes
    DateNote
    2007-04-04MTR2/YKL186C mRNA contains an intron in the 5' untranslated region (UTR); however, Miura et al. also detected an unspliced form that was more prevalent than the spliced version.

    Miura F, et al. (2006) A large-scale full-length cDNA analysis to explore the budding yeast transcriptome. Proc Natl Acad Sci U S A 103(47):17846-51
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  Web Supplement  yfgdb  

    Sequence Retrieval [TOP] [NEXT] Help
    Sequence Type Output Format
    Genomic DNA GCG | FASTA | NoHeader
    Genomic DNA with 1 kb up and downstream GCG | FASTA | NoHeader
    DNA coding sequence
    (without introns, without flanking regions)
    GCG | FASTA | NoHeader
    Protein Translation of ORF GCG | FASTA | NoHeader
    6-Frame Translation(with Restriction Map) GCG
    Restriction Fragment Sizes GCG
  • Sequence Analysis Tools
  • Sequence from other databases
    Sequence IDSource
    YKL186CSGD Systematic Sequence
    853649NCBI: Gene ID
    NP_012735.1NCBI: RefSeq protein version ID
    NP_012735.1NCBI: RefSeq protein version ID
    6322662NCBI: NCBI protein GI

    Map and Displays [TOP] [NEXT] Help
    Physical, Genetic Maps: Chromosomal Feature Map GBrowse Combined Physical and Genetic Map Genetic Distance vs. Physical Distance Ratios
    Similarity Viewers: Synteny Viewer Genomic Stripe View SAGE Results Map  

    Localization [TOP] [NEXT] Help
  • Localization Resources
  • Community Annotation [TOP] [NEXT] Help
    No community annotation available.

    Literature Guide: papers categorized by topic. [TOP]   Help
    TopicsReferenceOther Genes Addressed
    47 curated references; 0 references not yet curated
    Reviews
    Fasken MB and Corbett AH (2009) Mechanisms of nuclear mRNA quality control. RNA Biol 6(3):237-41
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DIS3 |MEX67 |MLP1 |NAB2 |PAP2 |PML39 |RRP6 |SUB2 |YRA1
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Faza MB, et al. (2009) Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery. J Cell Biol 184(6):833-46
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CSN12 |MEX67 |SAC3 |SEM1 |SUB2 |SUS1 |THP1 |YPR045C |YRA1
    RNA Levels and Processing
    Regulation of
    Kawashima T, et al. (2009) Nonsense-mediated mRNA decay mutes the splicing defects of spliceosome component mutations. RNA 15(12):2236-47
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |BOS1 |CDC40 |CIN2 |LSB3 |MUD1 |NAM7 |NAM8 |PRP18 |PRP2 |PRP22 |REC107 |RPL16A |RPS11B |MORE
    Reviews
    Kressler D, et al. (2009) Driving Ribosome Assembly. Biochim Biophys Acta
    SGD Papers Entry  Pubmed Entry  
    |AFG2 |ARB1 |ARX1 |BMS1 |CRM1 |DBP10 |DBP2 |DBP3 |DBP6 |DBP7 |DBP8 |DBP9 |DRS1 |ECM1 |MORE
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Lo KY and Johnson AW (2009) Reengineering ribosome export. Mol Biol Cell 20(5):1545-54
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ARX1 |CRM1 |CSE1 |LOS1 |LSG1 |MEX67 |MSN5 |NMD3 |RPL11B |RPL12B |RPL25 |RPL3 |RPL32 |RPL8B
    Mutants/Phenotypes
    Strains/Constructs
    Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AAR2 |ABD1 |ABF1 |ACC1 |ACP1 |ADE13 |AFG2 |ALA1 |ALG1 |ALG13 |ALG14 |ALG2 |ALG7 |ALR1 |MORE
    Reviews
    Feldbrugge M, et al. (2008) The posttranscriptional machinery of Ustilago maydis. Fungal Genet Biol 45 Suppl 1:S40-6
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |ASH1 |DBP5 |GLE1 |KEM1 |MEX67 |MYO4 |NAM7 |NIP1 |NMD2 |NOP58 |PRT1 |RPG1 |SHE2 |MORE
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Hung NJ, et al. (2008) Arx1 Is a Nuclear Export Receptor for the 60S Ribosomal Subunit in Yeast. Mol Biol Cell 19(2):735-44
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ARX1 |CRM1 |GLE2 |MEX67 |NIC96 |NMD3 |NSP1 |NUP100 |NUP116 |NUP120 |NUP133 |NUP42 |NUP57 |NUP82 |MORE
    Reviews
    Hurt JA and Silver PA (2008) mRNA nuclear export and human disease. Dis Model Mech 1(2-3):103-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DBP5 |GLE1 |MEX67 |NUP42 |SUB2 |YRA1
    Computational analysis
    Evolution
    Fungal Related Genes/Proteins
    Non-Fungal Related Genes/Proteins
    Ohyanagi H, et al. (2008) Eukaryotic nuclear structure explains the evolutionary rate difference of ribosome export factors. Gene 421(1-2):7-13
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CRM1 |MAK21 |NMD3 |NOC2 |NOC3 |NOC4 |NOP14
    Evolution
    Non-Fungal Related Genes/Proteins
    Ohyanagi H, et al. (2008) The origin of nucleus: Rebuild from the prokaryotic ancestors of ribosome export factors. Gene 423(2):149-152
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CRM1 |MAK21 |NMD3 |NOC2 |NOC3 |NOC4 |NOP14
    DNA/RNA Sequence Features
    Mutants/Phenotypes
    Strains/Constructs
    Parenteau J, et al. (2008) Deletion of Many Yeast Introns Reveals a Minority of Genes that Require Splicing for Function. Mol Biol Cell 19(5):1932-41
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACT1 |ARP2 |ARP9 |BUD25 |CIN2 |COF1 |DYN2 |GIM5 |GLC7 |HNT1 |HOP2 |LSB3 |MOB1 |MOB2 |MORE
    Reviews
    Rougemaille M, et al. (2008) mRNA journey to the cytoplasm: attire required. Biol Cell 100(6):327-42
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CBC2 |CDC33 |HRB1 |MEX67 |NAB2 |NPL3 |PAB1 |SAC3 |STO1 |SUB2 |THP1 |YRA1
    Mutants/Phenotypes
    Protein Sequence Features
    Protein-Nucleic Acid Interactions
    Protein-protein Interactions
    Strains/Constructs
    Yao W, et al. (2008) A versatile interaction platform on the Mex67-Mtr2 receptor creates an overlap between mRNA and ribosome export. EMBO J 27(1):6-16
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |MEX67 |NMD3 |NUP116 |NUP120 |NUP145 |NUP159 |NUP82 |NUP84 |NUP85 |SEC13 |SEH1
    Function/Process
    Gaillard H, et al. (2007) A new connection of mRNP biogenesis and export with transcription-coupled repair. Nucleic Acids Res 35(12):3893-906
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DEF1 |FMP27 |HPR1 |MEX67 |MFT1 |RAD26 |RAD7 |RPB10 |RPB11 |RPB2 |RPB3 |RPB4 |RPB5 |RPB7 |MORE
    Reviews
    Kohler A and Hurt E (2007) Exporting RNA from the nucleus to the cytoplasm. Nat Rev Mol Cell Biol 8(10):761-73
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ARC1 |ARX1 |CDC31 |CEX1 |CRM1 |DBP5 |GLE1 |GLE2 |HTZ1 |LOS1 |MEX67 |MLP1 |MLP2 |NMD3 |MORE
    Protein-protein Interactions
    Techniques and Reagents
    Oeffinger M, et al. (2007) Comprehensive analysis of diverse ribonucleoprotein complexes. Nat Methods 4(11):951-6
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ACB1 |ACT1 |ADE3 |AIM34 |ASH1 |ASM4 |BEM2 |BRR2 |BRX1 |BUD8 |CBC2 |CBF5 |CDC3 |CDC31 |MORE
    Reviews
    Stewart M (2007) Ratcheting mRNA out of the Nucleus. Mol Cell 25(3):327-30
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DBP5 |GLE1 |MEX67
    Reviews
    Taddei A (2007) Active genes at the nuclear pore complex. Curr Opin Cell Biol 19(3):305-310
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ASM4 |CDC31 |DBP5 |GAL1 |GFD1 |GLE1 |GLE2 |HSP104 |HTZ1 |INO1 |KAP120 |KAP122 |KAP123 |KAP95 |MORE
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Protein Sequence Features
    Protein-Nucleic Acid Interactions
    Protein-protein Interactions
    Protein/Nucleic Acid Structure
    Strains/Constructs
    Yao W, et al. (2007) Nuclear Export of Ribosomal 60S Subunits by the General mRNA Export Receptor Mex67-Mtr2. Mol Cell 26(1):51-62
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |NMD3
    Evolution
    Fungal Related Genes/Proteins
    De Hertogh B, et al. (2006) Emergence of species-specific transporters during evolution of the hemiascomycete phylum. Genetics 172(2):771-81
    SGD Papers Entry  Pubmed Entry  Reference full text  
    |AAC1 |AAC3 |ACS2 |ADP1 |ADY2 |AGC1 |AGP1 |AGP2 |AGP3 |ALP1 |ALR1 |ALR2 |ANT1 |AQR1 |MORE
    Protein Physical Properties
    Protein-protein Interactions
    Strains/Constructs
    Gwizdek C, et al. (2006) Ubiquitin-associated domain of Mex67 synchronizes recruitment of the mRNA export machinery with transcription. Proc Natl Acad Sci U S A 103(44):16376-81
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |GAL10 |HPR1 |MEX67 |MFT1 |PMA1 |RAD23 |RSP5 |THP2
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Panse VG, et al. (2006) Formation and nuclear export of preribosomes are functionally linked to the small-ubiquitin-related modifier pathway. Traffic 7(10):1311-21
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |ARX1 |BUD20 |CIC1 |ECM1 |ENP1 |LSG1 |MEX67 |NOP14 |NOP7 |NSA1 |NUG1 |PWP2 |RIX1 |RIX7 |MORE
    Reviews
    Izaurralde E (2004) Directing mRNA export. Nat Struct Mol Biol 11(3):210-2
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |NPL3 |SKY1
    Protein Sequence Features
    Protein-protein Interactions
    Protein/Nucleic Acid Structure
    Fribourg S and Conti E (2003) Structural similarity in the absence of sequence homology of the messenger RNA export factors Mtr2 and p15. EMBO Rep 4(7):699-703
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |NTF2
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Protein-protein Interactions
    Strains/Constructs
    Lei EP, et al. (2003) Sac3 is an mRNA export factor that localizes to cytoplasmic fibrils of nuclear pore complex. Mol Biol Cell 14(3):836-47
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |SAC3
    Fungal Related Genes/Proteins
    Senay C, et al. (2003) The Mtr2-Mex67 NTF2-like domain complex. Structural insights into a dual role of Mtr2 for yeast nuclear export. J Biol Chem 278(48):48395-403
    SGD Papers Entry  Pubmed Entry  
    |MEX67 |NTF2
    Function/Process
    Protein-protein Interactions
    Fischer T, et al. (2002) The mRNA export machinery requires the novel Sac3p-Thp1p complex to dock at the nucleoplasmic entrance of the nuclear pores. EMBO J 21(21):5843-52
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |MEX67 |NUP1 |SAC3 |SUB2 |THP1 |YRA1
    Function/Process
    Fungal Related Genes/Proteins
    Mutants/Phenotypes
    Strains/Constructs
    Jimeno S, et al. (2002) The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability. EMBO J 21(13):3526-35
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |HPR1 |MEX67 |MFT1 |SUB2 |THO2 |THP2 |YRA1
    Function/Process
    Protein-protein Interactions
    Nissan TA, et al. (2002) 60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm. EMBO J 21(20):5539-47
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |ARX1 |LSG1 |MDN1 |NMD3 |NOP7 |NUG1 |RIX1 |SDA1
    Function/Process
    Substrates/Ligands/Cofactors
    Jensen TH, et al. (2001) A block to mRNA nuclear export in S. cerevisiae leads to hyperadenylation of transcripts that accumulate at the site of transcription. Mol Cell 7(4):887-98
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DBP5 |GLE1 |HSP104 |MEX67 |NUP159 |NUP42 |SSA4
    Cellular Location
    Protein-protein Interactions
    Strasser K and Hurt E (2001) Splicing factor Sub2p is required for nuclear mRNA export through its interaction with Yra1p. Nature 413(6856):648-52
    SGD Papers Entry  Pubmed Entry  
    |MEX67 |SUB2 |YRA1
    Cellular Location
    Function/Process
    Strains/Constructs
    Strawn LA, et al. (2001) The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex. J Biol Chem 276(9):6445-52
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DBP5 |GLE1 |GLE2 |KAP95 |MEX67 |NUP100 |NUP116
    Fungal Related Genes/Proteins
    RNA Levels and Processing
    Davis CA, et al. (2000) Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast. Nucleic Acids Res 28(8):1700-6
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |AIM11 |AMA1 |AML1 |APE2 |APS3 |ARP9 |ASC1 |BET1 |BIG1 |BOS1 |CDC21 |COF1 |DCN1 |DID4 |MORE
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Substrates/Ligands/Cofactors
    Stage-Zimmermann T, et al. (2000) Factors affecting nuclear export of the 60S ribosomal subunit in vivo. Mol Biol Cell 11(11):3777-89
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |CRM1 |CSE1 |DBP5 |FAL1 |GLE1 |GLE2 |KAP104 |KAP120 |KAP123 |KAP95 |MEX67 |MSN5 |MTR10 |MTR4 |MORE
    Protein-Nucleic Acid Interactions
    Protein-protein Interactions
    Techniques and Reagents
    Strasser K and Hurt E (2000) Yra1p, a conserved nuclear RNA-binding protein, interacts directly with Mex67p and is required for mRNA export. EMBO J 19(3):410-20
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |YRA1
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Protein-protein Interactions
    Strains/Constructs
    Strasser K, et al. (2000) Binding of the Mex67p/Mtr2p heterodimer to FXFG, GLFG, and FG repeat nucleoporins is essential for nuclear mRNA export. J Cell Biol 150(4):695-706
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |GLE2 |MEX67 |NSP1 |NUP116 |NUP159 |NUP42
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Vainberg IE, et al. (2000) Nuclear export of heat shock and non-heat-shock mRNA occurs via similar pathways. Mol Cell Biol 20(11):3996-4005
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |GLE1 |NUP159 |NUP42 |RNA1 |SRM1
    Non-Fungal Related Genes/Proteins
    Katahira J, et al. (1999) The Mex67p-mediated nuclear mRNA export pathway is conserved from yeast to human. EMBO J 18(9):2593-609
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |NTF2
    Reviews
    Strasser K and Hurt E (1999) Nuclear RNA export in yeast. FEBS Lett 452(1-2):77-81
    SGD Papers Entry  Pubmed Entry  
    |GLE1 |MEX67 |MTR10 |NPL3 |NSP1 |NUP120 |NUP145 |NUP159 |NUP82 |NUP85
    Cellular Location
    Function/Process
    Mutants/Phenotypes
    Protein-protein Interactions
    Strains/Constructs
    Santos-Rosa H, et al. (1998) Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores. Mol Cell Biol 18(11):6826-38
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MEX67 |NUP85
    Reviews
    Fabre E and Hurt E (1997) Yeast genetics to dissect the nuclear pore complex and nucleocytoplasmic trafficking. Annu Rev Genet 31:277-313
    SGD Papers Entry  Pubmed Entry  
    |ACC1 |ASM4 |CBC2 |GLE1 |GLE2 |GSP1 |HRP1 |KAP104 |KAP123 |KAP95 |LOS1 |MEX67 |MTR3 |MTR4 |MORE
    Reviews
    Wente SR, et al. (1997) "The nucleus and nucleocytoplasmic transport in Saccharomyces cerevisiae." Pp. 471-546 in The Molecular and Cellular Biology of the Yeast Saccharomyces: Cell Cycle and Cell Biology, edited by Pringle JR, Broach JR and Jones EW. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
    SGD Papers Entry  
    |GLE1 |GLE2 |GSP1 |GSP2 |KAP95 |NIC96 |NPL3 |NSP1 |NTF2 |NUP1 |NUP100 |NUP116 |NUP120 |NUP133 |MORE
    Function/Process
    Fungal Related Genes/Proteins
    Reviews
    Schneiter R, et al. (1995) mRNA transport in yeast: time to reinvestigate the functions of the nucleolus. Mol Biol Cell 6(4):357-70
    SGD Papers Entry  Pubmed Entry  
    |NPL3 |NUP116 |NUP145 |NUP49 |RNA14
    Fungal Related Genes/Proteins
    Mutants/Phenotypes
    Strains/Constructs
    Kadowaki T, et al. (1994) Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants. J Cell Biol 126(3):649-59
    SGD Papers Entry  Pubmed Entry  
    |ACC1 |MTR10 |MTR3 |MTR4 |NPL3 |SRM1
    DNA/RNA Sequence Features
    Function/Process
    Fungal Related Genes/Proteins
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Protein Sequence Features
    Strains/Constructs
    Kadowaki T, et al. (1994) Nuclear mRNA accumulation causes nucleolar fragmentation in yeast mtr2 mutant. Mol Biol Cell 5(11):1253-63
    SGD Papers Entry  Pubmed Entry  

    DNA/RNA Sequence Features
    Mapping
    Strains/Constructs
    Wiemann S, et al. (1993) Sequencing and analysis of 51.6 kilobases on the left arm of chromosome XI from Saccharomyces cerevisiae reveals 23 open reading frames including the FAS1 gene. Yeast 9(12):1343-8
    SGD Papers Entry  Pubmed Entry  
    |FAS1


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