ALG1/YBR110W Single Page Format |
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Contents
- Names and Identifiers
- GO Annotations
- Pathways
- Summary Paragraph
- Mutant Phenotypes
- Interactions
- Homologs
- Protein Info (physical properties, transcript info)
- PDB Homologs (protein structure info)
- Motifs
- Genome-wide Expression
(and other large-scale analyses)- Locus History (misc. notes)
- Sequence Retrieval and Analysis
- Map and Displays
- Localization
- Community Annotation
- Literature Guide
Sequence Coordinates
  ChrII: 458866 to 460215
CDS: 458866 - 460215
Genetic position: 54 cM
Genetic Map DataClick on map for expanded view
SGD ORF map GBrowse SGD Locus Page
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| Standard Name | Systematic Name | Alias | Feature Type | SGDID | ||||
| ALG1 | YBR110W |   | ORF, Verified | S000000314 | ||||
| Description | ||||||||
| Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability, mutation is functionally complemented by human ortholog | ||||||||
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| lipid-linked oligosaccharide biosynthesis | |||||||||
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| Phenotype page for ALG1/YBR110W | |||||||
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| Interaction page for ALG1/YBR110W | |||||||||
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MFLEIPRWLLALIILYLSIPLVVYYVIPYLFYGNKSTKKRIIIFVLGDVG
HSPRICYHAISFSKLGWQVELCGYVEDTLPKIISSDPNITVHHMSNLKRK
GGGTSVIFMVKKVLFQVLSIFKLLWELRGSDYILVQNPPSIPILPIAVLY
KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNL
TVTEAMRKYLIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQKALTTKAF
IKNYIRDDFDTEKGDKIIVTSTSFTPDEDIGILLGALKIYENSYVKFDSS
LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYPKLLQLCD
YGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFV
DRRELHESLIFAMKDADLYQKLKKNVTQEAENRWQSNWERTMRDLKLIH*
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| No protein structure information available. | |||||||||
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| You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses. | |||||
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| Nomenclature History |
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| Standard Name | Reference |
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| ALG1 | SGD (2007) Information without a citation in SGD |
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| Sequence Type | Output Format | ||||
| Genomic DNA | GCG | FASTA | NoHeader | ||||
| Genomic DNA with 1 kb up and downstream | GCG | FASTA | NoHeader | ||||
| DNA coding sequence (without introns, without flanking regions) | GCG | FASTA | NoHeader | ||||
| Protein Translation of ORF | GCG | FASTA | NoHeader | ||||
| 6-Frame Translation(with Restriction Map) | GCG | ||||
| Restriction Fragment Sizes | GCG | ||||
| Sequence from other databases | |
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| Sequence ID | Source |
| YBR110W | SGD Systematic Sequence |
| 852407 | NCBI: Gene ID |
| NP_009668.1 | NCBI: RefSeq protein version ID |
| NP_009668.1 | NCBI: RefSeq protein version ID |
| 6319586 | NCBI: NCBI protein GI |
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| Physical, Genetic Maps: | Chromosomal Feature Map | GBrowse | Combined Physical and Genetic Map | Genetic Distance vs. Physical Distance Ratios | ||||
| Similarity Viewers: | Synteny Viewer | Genomic Stripe View | SAGE Results Map |   | ||||
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| No community annotation available. | |||||||||
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| Topics | Reference | Other Genes Addressed | 39 curated references; 0 references not yet curated | |||
| Mutants/Phenotypes Strains/Constructs | Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8 | |AAR2 |ABD1 |ABF1 |ACC1 |ACP1 |ADE13 |AFG2 |ALA1 |ALG13 |ALG14 |ALG2 |ALG7 |ALR1 |AOS1 |MORE | ||||
| Fungal Related Genes/Proteins | Deshpande N, et al. (2008) Protein glycosylation pathways in filamentous fungi. Glycobiology 18(8):626-37 | |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG3 |ALG6 |ALG7 |ALG8 |ALG9 |ANP1 |CWH41 |DIE2 |DPM1 |MORE | ||||
| Reviews | Jigami Y (2008) Yeast glycobiology and its application. Biosci Biotechnol Biochem 72(3):637-48 | |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG3 |ALG5 |ALG6 |ALG7 |ALG8 |ALG9 |ANP1 |CWH41 |DIE2 |MORE | ||||
| Protein Physical Properties | White MA, et al. (2007) Characteristics affecting expression and solubilization of yeast membrane proteins. J Mol Biol 365(3):621-36 | |ALG7 |APQ12 |AQY1 |ARE2 |ATG9 |ATP4 |BET1 |BIG1 |BOS1 |BRR6 |CAX4 |CHO1 |COS7 |COS8 |MORE | ||||
| Reviews | Lehle L, et al. (2006) Protein glycosylation, conserved from yeast to man: a model organism helps elucidate congenital human diseases. Angew Chem Int Ed Engl 45(41):6802-18 | |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG3 |ALG5 |ALG6 |ALG7 |ALG8 |ALG9 |DIE2 |DPM1 |OST1 |MORE | ||||
| Function/Process Strains/Constructs Substrates/Ligands/Cofactors | O'Reilly MK, et al. (2006) In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis. Biochemistry 45(31):9593-603 | |ALG11 |ALG2 | ||||
| Reviews | Weerapana E and Imperiali B (2006) Asparagine-linked protein glycosylation: from eukaryotic to prokaryotic systems. Glycobiology 16(6):91R-101R | |ALG11 |ALG13 |ALG14 |ALG2 |ALG7 |ALG9 |OST1 |OST2 |OST3 |OST4 |OST5 |OST6 |RFT1 |SEC11 |MORE | ||||
| Fungal Related Genes/Proteins Non-Fungal Related Genes/Proteins | Samuelson J, et al. (2005) The diversity of dolichol-linked precursors to Asn-linked glycans likely results from secondary loss of sets of glycosyltransferases. Proc Natl Acad Sci U S A 102(5):1548-53 | |ALG11 |ALG2 |ALG5 |ALG7 |DPM1 |STT3 | ||||
| Protein-protein Interactions Strains/Constructs | Yan A and Lennarz WJ (2005) Two oligosaccharyl transferase complexes exist in yeast and associate with two different translocons. Glycobiology 15(12):1407-15 | |OST1 |OST2 |OST3 |OST4 |OST5 |OST6 |SBH1 |SBH2 |SWP1 |WBP1 | ||||
| Cellular Location Genetic Interactions Mutants/Phenotypes Protein Sequence Features Protein-protein Interactions Strains/Constructs | Gao XD, et al. (2004) Physical interactions between the Alg1, Alg2, and Alg11 mannosyltransferases of the endoplasmic reticulum. Glycobiology 14(6):559-70 | |ALG11 |ALG2 | ||||
| Cross-species Expression Mutants/Phenotypes Non-Fungal Related Genes/Proteins Strains/Constructs | Grubenmann CE, et al. (2004) Deficiency of the first mannosylation step in the N-glycosylation pathway causes congenital disorder of glycosylation type Ik. Hum Mol Genet 13(5):535-42 | |||||
| Cross-species Expression Disease Gene Related Mutants/Phenotypes Non-Fungal Related Genes/Proteins Strains/Constructs | Schwarz M, et al. (2004) Deficiency of GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase causes congenital disorder of glycosylation type Ik. Am J Hum Genet 74(3):472-81 | |||||
| Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs | Janik A, et al. (2003) Overexpression of GDP-mannose pyrophosphorylase in Saccharomyces cerevisiae corrects defects in dolichol-linked saccharide formation and protein glycosylation. Biochim Biophys Acta 1621(1):22-30 | |ALG2 |DPM1 |PSA1 | ||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Cullen PJ, et al. (2000) Defects in protein glycosylation cause SHO1-dependent activation of a STE12 signaling pathway in yeast. Genetics 155(3):1005-18 | |DPM1 |FUS1 |HOG1 |KSS1 |MNN10 |OCH1 |PGI1 |PMI40 |PSA1 |RER2 |SHO1 |SPT14 |STE11 |STE12 |MORE | ||||
| Fungal Related Genes/Proteins | Takahashi T, et al. (2000) Cloning of the human cDNA which can complement the defect of the yeast mannosyltransferase I-deficient mutant alg 1. Glycobiology 10(3):321-7 | |||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Mazhari-Tabrizi R, et al. (1999) Chromosomal promoter replacement in Saccharomyces cerevisiae: construction of conditional lethal strains for the cloning of glycosyltransferases from various organisms. Glycoconj J 16(11):673-9 | |ALG7 |DPM1 |GAA1 |GPI2 |PIS1 |SEC59 |SPT14 |WBP1 | ||||
| Mutants/Phenotypes | Cueva R, et al. (1998) N-glycosylation by transfer of GlcNAc2 from dolichol-PP-GlcNAc2 to the protein moiety of the major yeast exoglucanase. Yeast 14(8):773-81 | |||||
| Mutants/Phenotypes Strains/Constructs | Roy SK, et al. (1998) Functional evidence for UDP-galactose transporter in Saccharomyces cerevisiae through the in vivo galactosylation and in vitro transport assay. J Biol Chem 273(5):2583-90 | |MNN1 | ||||
| Non-Fungal Related Genes/Proteins Protein Sequence Features | Lee SK, et al. (1997) The Dictyostelium discoideum beta-1,4-mannosyltransferase gene, mntA, has two periods of developmental expression. Gene 204(1-2):251-8 | |||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Shimma Y, et al. (1997) A defect in GTP synthesis affects mannose outer chain elongation in Saccharomyces cerevisiae. Mol Gen Genet 256(5):469-80 | |GUK1 |PSA1 |SEC20 | ||||
| Cell Cycle Phase Involved Function/Process Genetic Interactions Mutants/Phenotypes | Benton BK, et al. (1996) Over-expression of S. cerevisiae G1 cyclins restores the viability of alg1 N-glycosylation mutants. Curr Genet 29(2):106-13 | |CLN1 |CLN2 |CLN3 |PSA1 | ||||
| Other Features | Papatsenko DA, et al. (1996) Mapping of DNA-binding proteins along the yeast genome by UV-induced DNA-protein crosslinking. FEBS Lett 381(1-2):103-5 | |TKL2 | ||||
| Mutants/Phenotypes Techniques and Reagents | Schwientek T, et al. (1996) Golgi localization and in vivo activity of a mammalian glycosyltransferase (human beta1,4-galactosyltransferase) in yeast. J Biol Chem 271(7):3398-405 | |KRE2 | ||||
| Function/Process Protein Sequence Features | Shpakov AO and Derkach KV (1996) [Yeast dolichol-conjugated mannosyltransferases. A theoretical analysis of the primary structure and identification of the sites homologous to other enzymes of the dolichol cycle] Zh Evol Biokhim Fiziol 32(1):3-18 | |ALG2 | ||||
| Mutants/Phenotypes Other Features Techniques and Reagents | Dean N (1995) Yeast glycosylation mutants are sensitive to aminoglycosides. Proc Natl Acad Sci U S A 92(5):1287-91 | |ALG2 |ALG3 |ALG5 |ANP1 |CWH41 |MNN1 |MNN10 |MNN2 |MNN9 |SEC53 |VRG4 |WBP1 | ||||
| Cell Cycle Phase Involved Function/Process RNA Levels and Processing Regulation of Transcription | Lennon K, et al. (1995) Proliferation-dependent differential regulation of the dolichol pathway genes in Saccharomyces cerevisiae. Glycobiology 5(6):633-42 | |ALG2 |ALG7 | ||||
| Cellular Location Function/Process Other Features Protein Sequence Features Protein/Nucleic Acid Structure Techniques and Reagents | Shpakov AO and Shpakova EA (1995) [Identification of repetitive sequences and internal symmetry in primary structure of yeast GDP-Man:Dol-PP-GlcNAc2 mannosyltransferase] Ukr Biokhim Zh 67(4):33-40 | |||||
| Cell Cycle Phase Involved Function/Process Mutants/Phenotypes Other Features RNA Levels and Processing Regulation of Transcription | Kukuruzinska MA and Lennon K (1994) Growth-related coordinate regulation of the early N-glycosylation genes in yeast. Glycobiology 4(4):437-43 | |ALG2 |ALG7 | ||||
| Function/Process Mutants/Phenotypes Protein Physical Properties Protein Sequence Features Strains/Constructs Techniques and Reagents | Revers L, et al. (1994) The potential dolichol recognition sequence of beta-1,4-mannosyltransferase is not required for enzymic activity using phytanyl-pyrophosphoryl-alpha-N,N'- diacetylchitobioside as acceptor. Biochem J 299 ( Pt 1)():23-7 | |||||
| Function/Process Genetic Interactions Techniques and Reagents | Roos J, et al. (1994) A screen for yeast mutants with defects in the dolichol-mediated pathway for N-glycosylation. Proc Natl Acad Sci U S A 91(4):1485-9 | |ENP1 |SEC59 | ||||
| Reviews | Herscovics A and Orlean P (1993) Glycoprotein biosynthesis in yeast. FASEB J 7(6):540-50 | |ALG2 |ALG3 |ALG5 |ALG6 |ALG7 |ALG8 |ANP1 |CWH41 |DPM1 |GDA1 |GFA1 |KRE2 |MNN1 |MNN10 |MORE | ||||
| DNA/RNA Sequence Features Mapping Transcription | Mannhaupt G, et al. (1992) Molecular analysis of yeast chromosome II between CMD1 and LYS2: the excision repair gene RAD16 located in this region belongs to a novel group of double-finger proteins. Yeast 8(5):397-408 | |CMD1 |CYC8 |LYS2 |PHO5 |RAD16 |RAD54 |SNF2 | ||||
| Cellular Location DNA/RNA Sequence Features Function/Process Mutants/Phenotypes Protein Processing/Modification/Regulation Protein Sequence Features RNA Levels and Processing Techniques and Reagents Transcription | Albright CF and Robbins RW (1990) The sequence and transcript heterogeneity of the yeast gene ALG1, an essential mannosyltransferase involved in N-glycosylation. J Biol Chem 265(12):7042-9 | |||||
| Cellular Location Function/Process Fungal Related Genes/Proteins Non-Fungal Related Genes/Proteins Protein Sequence Features Protein/Nucleic Acid Structure | Albright CF, et al. (1989) A 13-amino acid peptide in three yeast glycosyltransferases may be involved in dolichol recognition. Proc Natl Acad Sci U S A 86(19):7366-9 | |ALG7 |DPM1 |SEC59 | ||||
| Function/Process Mutants/Phenotypes Other Features Techniques and Reagents | Appukuttan PS and Wu HC (1989) Fatty acylation of yeast glycoproteins proceeds independently of N-linked glycosylation. FEBS Lett 255(1):139-42 | |ALG2 | ||||
| Function/Process Mapping Mutants/Phenotypes Strains/Constructs Techniques and Reagents | Couto JR, et al. (1984) Cloning and expression in Escherichia coli of a yeast mannosyltransferase from the asparagine-linked glycosylation pathway. J Biol Chem 259(1):378-82 | |LYS2 | ||||
| Cell Cycle Phase Involved Mutants/Phenotypes | Klebl F, et al. (1984) A temperature-sensitive N-glycosylation mutant of S. cerevisiae that behaves like a cell-cycle mutant. Exp Cell Res 150(2):309-13 | |||||
| Mutants/Phenotypes Techniques and Reagents | Huffaker TC and Robbins PW (1983) Yeast mutants deficient in protein glycosylation. Proc Natl Acad Sci U S A 80(24):7466-70 | |ALG2 |ALG3 |ALG5 |ALG6 |SEC53 | ||||
| Function/Process Mutants/Phenotypes Techniques and Reagents | Huffaker TC and Robbins PW (1982) Temperature-sensitive yeast mutants deficient in asparagine-linked glycosylation. J Biol Chem 257(6):3203-10 | |||||
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