RER2/YBR002C Single Page Format

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SGD Locus Page

Names and Identifiers [TOP] [NEXT] Help
Standard Name Systematic Name Alias Feature Type SGDID
RER2 YBR002C   ORF, Verified S000000206
Description
Cis-prenyltransferase involved in dolichol synthesis; participates in endoplasmic reticulum (ER) protein sorting

GO Annotations [TOP] [NEXT] Help
Molecular Function
Annotation(s)Reference(s)EvidenceAssigned By
dehydrodolichyl diphosphate synthase activitySato M, et al. (2001) Yeast Saccharomyces cerevisiae has two cis-prenyltransferases with different properties and localizations. Implication for their distinct physiological roles in dolichol synthesis. Genes Cells 6(6):495-506
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2005-07-08
SGD
prenyltransferase activitySato M, et al. (1999) The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis. Mol Cell Biol 19(1):471-83
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-03-07
SGD
Poznanski J and Szkopinska A (2007) Precise bacterial polyprenol length control fails in Saccharomyces cerevisiae. Biopolymers 86(2):155-64
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2007-03-12
SGD
transferase activityGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0808
Assigned on 2009-03-04
UniProtKB
transferase activity, transferring alkyl or aryl (other than methyl) groupsDDB, et al. (2001) Gene Ontology annotation through association of InterPro records with GO terms.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:IPR018520 , EBI:IPR001441
Assigned on 2009-03-04
UniProtKB
Biological Process
Annotation(s)Reference(s)EvidenceAssigned By
ER to Golgi vesicle-mediated transportBelgareh-Touze N, et al. (2003) Yeast functional analysis: identification of two essential genes involved in ER to Golgi trafficking. Traffic 4(9):607-17
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
Assigned on 2005-07-12
SGD
dolichol biosynthetic processKato J, et al. (1999) The Escherichia coli homologue of yeast RER2, a key enzyme of dolichol synthesis, is essential for carrier lipid formation in bacterial cell wall synthesis. J Bacteriol 181(9):2733-8
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-08-27
SGD
protein amino acid glycosylationSato M, et al. (1999) The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis. Mol Cell Biol 19(1):471-83
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IMP : Inferred from Mutant Phenotype
IDA : Inferred from Direct Assay
Assigned on 2002-03-07
SGD
Cellular Component
Annotation(s)Reference(s)EvidenceAssigned By
endoplasmic reticulumSato M, et al. (1999) The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis. Mol Cell Biol 19(1):471-83
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-03-07
SGD
Sato M, et al. (2001) Yeast Saccharomyces cerevisiae has two cis-prenyltransferases with different properties and localizations. Implication for their distinct physiological roles in dolichol synthesis. Genes Cells 6(6):495-506
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
IDA : Inferred from Direct Assay
Assigned on 2002-03-07
SGD
GOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0256
Assigned on 2007-05-23
UniProtKB
extrinsic to membraneGOA curators and UniProt curators (2007) Gene Ontology annotation based on Swiss-Prot Subcellular Location vocabulary mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:SL-9903
Assigned on 2009-10-01
UniProtKB
membraneGOA curators (2000) Gene Ontology annotation based on Swiss-Prot keyword mapping.
SGD Papers Entry  Reference full text  
IEA : Inferred from Electronic Annotation with EBI:KW-0472
Assigned on 2007-05-23
UniProtKB

Pathways [TOP] [NEXT] Help
No pathways available

Summary Paragraph [TOP] [NEXT] Help
SUMMARY PARAGRAPH for RER2/YBR002C for RER2
Dolichols are a class of polyisoprenoid alcohols with five or more isoprene units in which the C2-C3 bond is saturated. In yeast, dolichols with 14-18 isoprene units are the carrier molecules on which many of the steps in N-linked glycosylation, O-linked glycosylation, and GPI anchor synthesis occur on the membrane of the endoplasmic reticulum (ER) (reviewed in 1). In mammals, dolichols with 19-22 isoprene units are the carrier molecules on which these steps occur.

RER2 encodes a cis-prenyltransferase that catalyzes the formation of dehydrodolichyl diphosphate, the committed step in dolichol synthesis, from farnesyl diphosphate and an isopentenyl pyrophosphate with 10-14 isoprene units. This results in the formation of a dolichol precursor with 14-18 isoprene units (2, 3). Rer2p is peripherally associated with the ER membrane (2, 3). RER2 is expressed in the early logarithmic phase (3). Overexpression of Erg20p, which synthesizes the Rer2p substrate farnesyl diphosphate, induces expression of RER2, SRT1, and DPM1.

Originally isolated as a mutant defective in retaining certain proteins in the ER (2), rer2 cells also grow slowly (2, 4) have defects in N-linked and O-linked glycosylation (2, 5), and form clumps when grown in suspension (2). They accumulate excessive ER and Golgi membrane material and are sensitive to hygromycin B and resistant to sodium orthovanadate (2).

Overexpression of the Rer2p homolog Srt1p, which synthesizes dolichol precursors with 19-22 isoprene units, suppresses deletion of RER2, but the resultant cells make only the longer-chain dolichols (2, 5). The rer2 srt1 double deletion is lethal (2).

The RER2 human homolog (OMIM), called hCIT(6) or hds (7) complements its deletion in yeast.

Last Updated: 2005-07-08

Basic References [TOP]   Help
BASIC INFORMATION REFERENCES forRER2/YBR002C for RER2
1)Grabinska K and Palamarczyk G (2002) Dolichol biosynthesis in the yeast Saccharomyces cerevisiae: an insight into the regulatory role of farnesyl diphosphate synthase. FEMS Yeast Res 2(3):259-65
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
2)Sato M, et al. (1999) The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis. Mol Cell Biol 19(1):471-83
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
3)Sato M, et al. (2001) Yeast Saccharomyces cerevisiae has two cis-prenyltransferases with different properties and localizations. Implication for their distinct physiological roles in dolichol synthesis. Genes Cells 6(6):495-506
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
4)Nishikawa S and Nakano A (1993) Identification of a gene required for membrane protein retention in the early secretory pathway. Proc Natl Acad Sci U S A 90(17):8179-83
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
5)Schenk B, et al. (2001) An alternative cis-isoprenyltransferase activity in yeast that produces polyisoprenols with chain lengths similar to mammalian dolichols. Glycobiology 11(1):89-98
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
6)Shridas P, et al. (2003) Identification and characterization of a cDNA encoding a long-chain cis-isoprenyltranferase involved in dolichyl monophosphate biosynthesis in the ER of brain cells. Biochem Biophys Res Commun 312(4):1349-56
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
7)Endo S, et al. (2003) Identification of human dehydrodolichyl diphosphate synthase gene. Biochim Biophys Acta 1625(3):291-5
SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  

Mutant Phenotypes [TOP] [NEXT] Help
Phenotype page for RER2/YBR002C

Interactions: genetic, physical, and other gene-gene links. [TOP] [NEXT] Help
Interaction page for RER2/YBR002C

Homologs [TOP] [NEXT] Help
  • Comparison Resources
  • Physical Properties and Transcript Information: predicted from sequence [TOP] [NEXT] Help
    Protein Sequence Calculations
    from Predicted Full length Translation
    N-term METDSGI
    C-term LKEKKLN
    Length(aa) 286
    MW(Da) 32,693
    pI 7.79
    Amino Acid Composition (full length)
    GCG tools: PepPlot, Helical Wheel, PepStruct

    Transcript Translation Calculations
    Codon Bias 0.003  
    Codon Adaptation Index 0.109  
    Frequency of Optimal Codons 0.400  
    Hydropathicity of Protein -0.315  
    Aromaticity Score 0.084  

                              10        20        30        40        50
                               |         |         |         |         |
                      METDSGIPGHSFVLKWTKNIFSRTLRASNCVPRHVGFIMDGNRRFARKKE
                      MDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRSSREVESLM
                      TLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKN
                      NKRATLNICFPYTGREEILHAMKETIVQHKKGAAIDESTLESHLYTAGVP
                      PLDLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLK
                      FSFHKSFLNKEYRLEEGDYDEETNGDPIDLKEKKLN*
    

    Protein Structures from PDB: proteins of known structure with sequence similarity to RER2/YBR002C, based on Smith-Waterman analysis. [TOP] [NEXT] Help
    PDB protein structure(s) homologous to RER2Homolog Source (per PDB)Protein Alignment: RER2 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    2vg2 ( Chain: D, B, A, C)
    Rv2361 with ipp
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain D = 1.9e-263725View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.9e-263725View alignment
    Chain A = 1.9e-263725View alignment
    Chain C = 1.9e-263725View alignment
    2vg3 ( Chain: D, B, C, A)
    Rv2361 with citronellyl pyrophosphate
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain D = 1.9e-263725View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.9e-263725View alignment
    Chain C = 1.9e-263725View alignment
    Chain A = 1.9e-263725View alignment
    2vg4 ( Chain: A, B, C, D)
    Rv2361 native
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain A = 1.9e-263725View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.9e-263725View alignment
    Chain C = 1.9e-263725View alignment
    Chain D = 1.9e-263725View alignment
    1x06 ( Chain: A)
    Crystal structure of undecaprenyl pyrophosphate synthase in complex with mg, ipp and fspp
  • PDB_Info
  • PDB_Structure
  • Escherichia coli3.3e-253427View alignmentSCOP
    MMDB
    CATH
    1x07 ( Chain: A)
    Crystal structure of undecaprenyl pyrophosphate synthase in complex with mg and ipp
  • PDB_Info
  • PDB_Structure
  • Escherichia coli3.3e-253427View alignmentSCOP
    MMDB
    CATH
    2e9c ( Chain: A, B)
    E. coli undecaprenyl pyrophosphate synthase in complex with bph-675
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain A = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.3e-253427View alignment
    2e9a ( Chain: B, A)
    E. coli undecaprenyl pyrophosphate synthase in complex with bph-628
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain B = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.3e-253427View alignment
    2e9d ( Chain: B, A)
    E. coli undecaprenyl pyrophosphate synthase in complex with bph-676
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain B = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.3e-253427View alignment
    2e99 ( Chain: B, A)
    E. coli undecaprenyl pyrophosphate synthase in complex with bph-608
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain B = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.3e-253427View alignment
    1ueh ( Chain: B, A)
    E. coli undecaprenyl pyrophosphate synthase in complex with triton x-100, magnesium and sulfate
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain B = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.3e-253427View alignment
    1jp3 ( Chain: A, B)
    Structure of e.coli undecaprenyl pyrophosphate synthase
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain A = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.3e-253427View alignment
    2e98 ( Chain: B, A)
    E. coli undecaprenyl pyrophosphate synthase in complex with bph-629
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain B = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.3e-253427View alignment
    1v7u ( Chain: A, B)
    Crystal structure of undecaprenyl pyrophosphate synthase with farnesyl pyrophosphate
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain A = 3.3e-253427View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.3e-253427View alignment
    1f75 ( Chain: A, B)
    Crystal structure of undecaprenyl diphosphate synthase from micrococcus luteus b-p 26
  • PDB_Info
  • PDB_Structure
  • Micrococcus luteusChain A = 4.7e-253528View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.7e-253528View alignment
    1x08 ( Chain: A)
    Crystal structure of d26a mutant upps in complex with mg, ipp and fspp
  • PDB_Info
  • PDB_Structure
  • Escherichia coli1.9e-243327View alignmentSCOP
    MMDB
    CATH
    1x09 ( Chain: A)
    Crystal structure of the d26a mutant upps in complex with magnesium and isopentenyl pyrophosphate
  • PDB_Info
  • PDB_Structure
  • Escherichia coli1.9e-243327View alignmentSCOP
    MMDB
    CATH
    2vg1 ( Chain: B, A)
    Rv1086 e,e-farnesyl diphosphate complex
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain B = 2.5e-233332View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.5e-233332View alignment
    2vg0 ( Chain: B, A)
    Rv1086 citronelly pyrophosphate complex
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain B = 2.5e-233332View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.5e-233332View alignment
    2vfw ( Chain: B, A)
    Rv1086 native
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain B = 2.5e-233332View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.5e-233332View alignment
    2d2r ( Chain: A, B)
    Crystal structure of helicobacter pylori undecaprenyl pyrophosphate synthase
  • PDB_Info
  • PDB_Structure
  • Helicobacter pyloriChain A = 3.0e-193131View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.0e-193131View alignment
    2dtn ( Chain: A, B)
    Crystal structure of helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate
  • PDB_Info
  • PDB_Structure
  • Helicobacter pyloriChain A = 3.0e-193131View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.0e-193131View alignment

    Genome-wide Expression and Other Large-Scale Analyses [TOP] [NEXT] Help
  • Functional Analysis
  • You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses.

    Locus History (misc. notes) [TOP] [NEXT] Help
    Nomenclature History
    Standard NameReference
    RER2Nishikawa S and Nakano A (1993) Identification of a gene required for membrane protein retention in the early secretory pathway. Proc Natl Acad Sci U S A 90(17):8179-83
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Sequence Retrieval [TOP] [NEXT] Help
    Sequence Type Output Format
    Genomic DNA GCG | FASTA | NoHeader
    Genomic DNA with 1 kb up and downstream GCG | FASTA | NoHeader
    DNA coding sequence
    (without introns, without flanking regions)
    GCG | FASTA | NoHeader
    Protein Translation of ORF GCG | FASTA | NoHeader
    6-Frame Translation(with Restriction Map) GCG
    Restriction Fragment Sizes GCG
  • Sequence Analysis Tools
  • Sequence from other databases
    Sequence IDSource
    YBR002CSGD Systematic Sequence
    852287NCBI: Gene ID
    NP_009556.1NCBI: RefSeq protein version ID
    NP_009556.1NCBI: RefSeq protein version ID
    6319474NCBI: NCBI protein GI

    Map and Displays [TOP] [NEXT] Help
    Physical, Genetic Maps: Chromosomal Feature Map GBrowse Combined Physical and Genetic Map Genetic Distance vs. Physical Distance Ratios
    Similarity Viewers: Synteny Viewer Genomic Stripe View SAGE Results Map  

    Localization [TOP] [NEXT] Help
  • Localization Resources
  • Community Annotation [TOP] [NEXT] Help
    No community annotation available.

    Literature Guide: papers categorized by topic. [TOP]   Help
    TopicsReferenceOther Genes Addressed
    26 curated references; 0 references not yet curated
    Reviews
    Kuranda K, et al. (2010) The isoprenoid pathway and transcriptional response to its inhibitors in the yeast Saccharomyces cerevisiae. FEMS Yeast Res 10(1):14-27
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |COQ1 |COX10 |ERG10 |ERG12 |ERG13 |ERG20 |ERG8 |ERG9 |HMG1 |HMG2 |IDI1 |MOD5 |MVD1 |RAM1 |MORE
    Mutants/Phenotypes
    Ammar R, et al. (2009) A comparative analysis of DNA barcode microarray feature size. BMC Genomics 10:471
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ADO1 |ALG7 |BCK1 |COP1 |FYV8 |GET2 |HAC1 |IRE1 |PSE1 |RET2 |RPC31 |VPS25 |YER010C |YFL032W |MORE
    Function/Process
    Regulation of
    Kuranda K, et al. (2009) The YTA7 gene is involved in the regulation of the isoprenoid pathway in the yeast Saccharomyces cerevisiae. FEMS Yeast Res 9(3):381-90
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ABC1 |AZR1 |ERG20 |HAP1 |HIR1 |HIR3 |HMG1 |HMG2 |OPT2 |SRB4 |SRT1 |YTA7
    Function/Process
    Regulation of
    Kaliszewski P, et al. (2008) Rsp5p ubiquitin ligase and the transcriptional activators Spt23p and Mga2p are involved in co-regulation of biosynthesis of end products of the mevalonate pathway and triacylglycerol in yeast Saccharomyces cerevisiae. Biochim Biophys Acta 1781(10):627-34
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |MGA2 |RSP5 |SPT23 |SRT1
    Genetic Interactions
    Mutants/Phenotypes
    Protein Processing/Modification/Regulation
    Strains/Constructs
    Gorka-Niec W, et al. (2007) Protein glycosylation in pmt mutants of Saccharomyces cerevisiae. Influence of heterologously expressed cellobiohydrolase II of Trichoderma reesei and elevated levels of GDP-mannose and cis-prenyltransferase activity. Biochim Biophys Acta 1770(5):774-80
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |PMT1 |PMT2 |PSA1
    Genetic Interactions
    Orlowski J, et al. (2007) Dissecting the role of dolichol in cell wall assembly in the yeast mutants impaired in early glycosylation reactions. Yeast 24(4):239-52
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPM1 |GAS1 |ROT1 |SEC59 |SLT2 |SRT1
    Function/Process
    Non-Fungal Related Genes/Proteins
    Protein Physical Properties
    Substrates/Ligands/Cofactors
    Poznanski J and Szkopinska A (2007) Precise bacterial polyprenol length control fails in Saccharomyces cerevisiae. Biopolymers 86(2):155-64
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |SRT1
    Cross-species Expression
    Function/Process
    Perlinska-Lenart U, et al. (2006) Overexpression of the Saccharomyces cerevisiae RER2 gene in Trichoderma reesei affects dolichol dependent enzymes and protein glycosylation. Fungal Genet Biol 43(6):422-9
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPM1 |PSA1
    Function/Process
    Regulation of
    Szkopinska A, et al. (2006) Interplay between the cis-prenyltransferases and polyprenol reductase in the yeast Saccharomyces cerevisiae. Biochimie 88(3-4):271-6
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ERG20 |ERG9 |SRT1
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Davierwala AP, et al. (2005) The synthetic genetic interaction spectrum of essential genes. Nat Genet 37(10):1147-52
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Web Supplement  yfgdb  
    |ABD1 |ACT1 |ALG13 |ALG14 |ALG7 |APC11 |ARL3 |ARP2 |ARP7 |ASK1 |AVO1 |BET3 |BET5 |BIM1 |MORE
    Genetic Interactions
    Transcription
    Grabinska K, et al. (2005) Functional relationships between the Saccharomyces cerevisiae cis-prenyltransferases required for dolichol biosynthesis. Acta Biochim Pol 52(1):221-32
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |DPM1 |ERG20 |SRT1
    Non-Fungal Related Genes/Proteins
    Jones J, et al. (2005) Polyprenyl lipid synthesis in mammalian cells expressing human cis-prenyl transferase. Biochem Biophys Res Commun 331(2):379-83
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  

    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Davydenko SG, et al. (2004) Screening for novel essential genes of Saccharomyces cerevisiae involved in protein secretion. Yeast 21(6):463-71
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |HSP150 |NOG2 |NOP15 |RPN5 |RRP40 |SDA1 |USE1
    Function/Process
    Mutants/Phenotypes
    Strains/Constructs
    Belgareh-Touze N, et al. (2003) Yeast functional analysis: identification of two essential genes involved in ER to Golgi trafficking. Traffic 4(9):607-17
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |USE1
    Cross-species Expression
    Non-Fungal Related Genes/Proteins
    Strains/Constructs
    Endo S, et al. (2003) Identification of human dehydrodolichyl diphosphate synthase gene. Biochim Biophys Acta 1625(3):291-5
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |SRT1
    Cross-species Expression
    Function/Process
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Strains/Constructs
    Shridas P, et al. (2003) Identification and characterization of a cDNA encoding a long-chain cis-isoprenyltranferase involved in dolichyl monophosphate biosynthesis in the ER of brain cells. Biochem Biophys Res Commun 312(4):1349-56
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |SEC59
    Function/Process
    Reviews
    Grabinska K and Palamarczyk G (2002) Dolichol biosynthesis in the yeast Saccharomyces cerevisiae: an insight into the regulatory role of farnesyl diphosphate synthase. FEMS Yeast Res 2(3):259-65
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  Reference LINKOUT  
    |ERG20 |HMG1 |HMG2 |SRT1 |YTA7
    Cellular Location
    Function/Process
    Genetic Interactions
    Mutants/Phenotypes
    Strains/Constructs
    Substrates/Ligands/Cofactors
    Sato M, et al. (2001) Yeast Saccharomyces cerevisiae has two cis-prenyltransferases with different properties and localizations. Implication for their distinct physiological roles in dolichol synthesis. Genes Cells 6(6):495-506
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ERG6 |SRT1
    Function/Process
    Fungal Related Genes/Proteins
    Genetic Interactions
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Strains/Constructs
    Schenk B, et al. (2001) An alternative cis-isoprenyltransferase activity in yeast that produces polyisoprenols with chain lengths similar to mammalian dolichols. Glycobiology 11(1):89-98
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |SRT1
    Genetic Interactions
    Cullen PJ, et al. (2000) Defects in protein glycosylation cause SHO1-dependent activation of a STE12 signaling pathway in yeast. Genetics 155(3):1005-18
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |ALG1 |DPM1 |FUS1 |HOG1 |KSS1 |MNN10 |OCH1 |PGI1 |PMI40 |PSA1 |SHO1 |SPT14 |STE11 |STE12 |MORE
    Non-Fungal Related Genes/Proteins
    Oh SK, et al. (2000) Molecular cloning, expression, and functional analysis of a cis-prenyltransferase from Arabidopsis thaliana. Implications in rubber biosynthesis. J Biol Chem 275(24):18482-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Non-Fungal Related Genes/Proteins
    Apfel CM, et al. (1999) Use of genomics to identify bacterial undecaprenyl pyrophosphate synthetase: cloning, expression, and characterization of the essential uppS gene. J Bacteriol 181(2):483-92
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  Reference LINKOUT  
    |SRT1
    Cellular Location
    DNA/RNA Sequence Features
    Function/Process
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Strains/Constructs
    Kato J, et al. (1999) The Escherichia coli homologue of yeast RER2, a key enzyme of dolichol synthesis, is essential for carrier lipid formation in bacterial cell wall synthesis. J Bacteriol 181(9):2733-8
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  

    Function/Process
    Fungal Related Genes/Proteins
    Mutants/Phenotypes
    Non-Fungal Related Genes/Proteins
    Strains/Constructs
    Sato M, et al. (1999) The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis. Mol Cell Biol 19(1):471-83
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |SEC12 |SEC59 |SRT1
    DNA/RNA Sequence Features
    Mapping
    Wolfe KH and Lohan AJ (1994) Sequence around the centromere of Saccharomyces cerevisiae chromosome II: similarity of CEN2 to CEN4. Yeast 10 Suppl A:S41-6
    SGD Papers Entry  Pubmed Entry  
    |CEN2 |CEN4 |COQ1 |HTA1 |HTA2 |NTH1 |NTH2
    Mutants/Phenotypes
    Strains/Constructs
    Nishikawa S and Nakano A (1993) Identification of a gene required for membrane protein retention in the early secretory pathway. Proc Natl Acad Sci U S A 90(17):8179-83
    SGD Papers Entry  Pubmed Entry  Reference LINKOUT  
    |KAR2 |RER1 |SEC12


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