ALG3/YBL082C Single Page Format |
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Contents
- Names and Identifiers
- GO Annotations
- Pathways
- Summary Paragraph
- Mutant Phenotypes
- Interactions
- Homologs
- Protein Info (physical properties, transcript info)
- PDB Homologs (protein structure info)
- Motifs
- Genome-wide Expression
(and other large-scale analyses)- Locus History (misc. notes)
- Sequence Retrieval and Analysis
- Map and Displays
- Localization
- Community Annotation
- Literature Guide
Sequence Coordinates
  ChrII: 71124 to 69748
CDS: 71124 - 69748Click on map for expanded view
SGD ORF map GBrowse SGD Locus Page
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| Standard Name | Systematic Name | Alias | Feature Type | SGDID | ||||
| ALG3 | YBL082C | RHK1 | ORF, Verified | S000000178 | ||||
| Description | ||||||||
| Dolichol-P-Man dependent alpha(1-3) mannosyltransferase, involved in the synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins | ||||||||
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| lipid-linked oligosaccharide biosynthesis | |||||||||
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| Phenotype page for ALG3/YBL082C | |||||||
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| Interaction page for ALG3/YBL082C | |||||||||
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MEGEQSPQGEKSLQRKQFVRPPLDLWQDLKDGVRYVIFDCRANLIVMPLL
ILFESMLCKIIIKKVAYTEIDYKAYMEQIEMIQLDGMLDYSQVSGGTGPL
VYPAGHVLIYKMMYWLTEGMDHVERGQVFFRYLYLLTLALQMACYYLLHL
PPWCVVLACLSKRLHSIYVLRLFNDCFTTLFMVVTVLGAIVASRCHQRPK
LKKSLALVISATYSMAVSIKMNALLYFPAMMISLFILNDANVILTLLDLV
AMIAWQVAVAVPFLRSFPQQYLHCAFNFGRKFMYQWSINWQMMDEEAFND
KRFHLALLISHLIALTTLFVTRYPRILPDLWSSLCHPLRKNAVLNANPAK
TIPFVLIASNFIGVLFSRSLHYQFLSWYHWTLPILIFWSGMPFFVGPIWY
VLHEWCWNSYPPNSQASTLLLALNTVLLLLLALTQLSGSVALAKSHLRTT
SSMEKKLN*
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| No protein structure information available. | |||||||||
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| You can also search multiple datasets simultaneously using Expression Connection for expression studies or Function Junction for other large scale analyses. | |||||
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| Nomenclature History |
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| Standard Name | Reference |
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| ALG3 | Huffaker TC and Robbins PW (1983) Yeast mutants deficient in protein glycosylation. Proc Natl Acad Sci U S A 80(24):7466-70 |
| Nomenclature History Notes |
| Date | Note |
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| 2005-06-02 | Upon consensus among the community, the standard name for YBL082C has been changed from RHK1 to ALG3, as ALG3 has been the more commonly used name for this gene. |
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| Sequence Type | Output Format | ||||
| Genomic DNA | GCG | FASTA | NoHeader | ||||
| Genomic DNA with 1 kb up and downstream | GCG | FASTA | NoHeader | ||||
| DNA coding sequence (without introns, without flanking regions) | GCG | FASTA | NoHeader | ||||
| Protein Translation of ORF | GCG | FASTA | NoHeader | ||||
| 6-Frame Translation(with Restriction Map) | GCG | ||||
| Restriction Fragment Sizes | GCG | ||||
| Sequence from other databases | |
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| Sequence ID | Source |
| YBL082C | SGD Systematic Sequence |
| 852196 | NCBI: Gene ID |
| NP_009471.1 | NCBI: RefSeq protein version ID |
| NP_009471.1 | NCBI: RefSeq protein version ID |
| 6319389 | NCBI: NCBI protein GI |
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| Physical, Genetic Maps: | Chromosomal Feature Map | GBrowse | Combined Physical and Genetic Map | Genetic Distance vs. Physical Distance Ratios | ||||
| Similarity Viewers: | Synteny Viewer | Genomic Stripe View | SAGE Results Map |   | ||||
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| No community annotation available. | |||||||||
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| Topics | Reference | Other Genes Addressed | 43 curated references; 0 references not yet curated | |||
| Strains/Constructs Techniques and Reagents | Clark KM, et al. (2009) Purification of Transmembrane Proteins from Saccharomyces cerevisiae for X-ray Crystallography. Protein Expr Purif | |AAC1 |AAC3 |ADP1 |ALG7 |BOR1 |CHO1 |DGA1 |DPP1 |ENA5 |EPT1 |GPT2 |LPP1 |NFT1 |PDR10 |MORE | ||||
| Genetic Interactions Mutants/Phenotypes Strains/Constructs | Clerc S, et al. (2009) Htm1 protein generates the N-glycan signal for glycoprotein degradation in the endoplasmic reticulum. J Cell Biol 184(1):159-72 | |ALG12 |ALG8 |ALG9 |MNL1 |MNS1 |PDI1 |PRC1 |ROT2 |YOS9 | ||||
| Genetic Interactions Mutants/Phenotypes Strains/Constructs | Copic A, et al. (2009) Genomewide analysis reveals novel pathways affecting endoplasmic reticulum homeostasis, protein modification and quality control. Genetics 182(3):757-69 | |CSF1 |EOS1 |HAC1 |HTZ1 |KAR2 |LHS1 |MNN11 |MRPL16 |PHO88 |UBX2 |YLR065C | ||||
| Genetic Interactions Mutants/Phenotypes Strains/Constructs | Jonikas MC, et al. (2009) Comprehensive characterization of genes required for protein folding in the endoplasmic reticulum. Science 323(5922):1693-7 | |AIM27 |ALG12 |ALG5 |ALG6 |ALG8 |ALG9 |CUE1 |DER1 |DIE2 |EMC1 |EMC2 |EMC4 |EMC6 |GET1 |MORE | ||||
| Fungal Related Genes/Proteins | Deshpande N, et al. (2008) Protein glycosylation pathways in filamentous fungi. Glycobiology 18(8):626-37 | |ALG1 |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG6 |ALG7 |ALG8 |ALG9 |ANP1 |CWH41 |DIE2 |DPM1 |MORE | ||||
| Cross-species Expression Mutants/Phenotypes Non-Fungal Related Genes/Proteins Strains/Constructs | Henquet M, et al. (2008) Identification of the Gene Encoding the {alpha}1,3-Mannosyltransferase (ALG3) in Arabidopsis and Characterization of Downstream N-Glycan Processing. Plant Cell 20(6):1652-64 | |||||
| Reviews | Jigami Y (2008) Yeast glycobiology and its application. Biosci Biotechnol Biochem 72(3):637-48 | |ALG1 |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG5 |ALG6 |ALG7 |ALG8 |ALG9 |ANP1 |CWH41 |DIE2 |MORE | ||||
| Cellular Location Computational analysis | Qi Y, et al. (2008) Finding friends and enemies in an enemies-only network: A graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions. Genome Res 18(12):1991-2004 | |AAH1 |ADA2 |AGE1 |AGE2 |AIM29 |ALG5 |ALG6 |ALG8 |ALG9 |ANP1 |ARL3 |ARP3 |ARP4 |ASK1 |MORE | ||||
| Reviews | Lehle L, et al. (2006) Protein glycosylation, conserved from yeast to man: a model organism helps elucidate congenital human diseases. Angew Chem Int Ed Engl 45(41):6802-18 | |ALG1 |ALG11 |ALG12 |ALG13 |ALG14 |ALG2 |ALG5 |ALG6 |ALG7 |ALG8 |ALG9 |DIE2 |DPM1 |OST1 |MORE | ||||
| Alias Cross-species Expression | Miyamoto M, et al. (2006) The role of the histidine-35 residue in the cytocidal action of HM-1 killer toxin. Microbiology 152(Pt 10):2951-8 | |||||
| Mutants/Phenotypes | Chen Y, et al. (2005) Identification of mitogen-activated protein kinase signaling pathways that confer resistance to endoplasmic reticulum stress in Saccharomyces cerevisiae. Mol Cancer Res 3(12):669-77 | |ALG8 |ALG9 |ARD1 |BCK1 |CMR2 |CNB1 |DAL81 |DID2 |EDE1 |ERV25 |FPS1 |FYV8 |HAC1 |HOG1 |MORE | ||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Mendelsohn RD, et al. (2005) A hypomorphic allele of the first N-glycosylation gene, ALG7, causes mitochondrial defects in yeast. Biochim Biophys Acta 1723(1-3):33-44 | |ALG5 |ALG6 |ALG7 |CHS1 |CNE1 |GPX2 |GSC2 |KAR2 |URA3 |YBR241C |YBR242W | ||||
| Function/Process Genetic Interactions | Schuldiner M, et al. (2005) Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Cell 123(3):507-19 ![]() | |ALG12 |ALG5 |ALG6 |ALG8 |ALG9 |API2 |APL5 |APL6 |APM3 |APS3 |ARL1 |ARL3 |ARV1 |BIG1 |MORE | ||||
| Mutants/Phenotypes Strains/Constructs | Stephens C, et al. (2005) The mode of action of the plant antimicrobial peptide MiAMP1 differs from that of its structural homologue, the yeast killer toxin WmKT. FEMS Microbiol Lett 243(1):205-10 | |IPT1 |STT3 | ||||
| Function/Process Mutants/Phenotypes | Szathmary R, et al. (2005) Yos9 protein is essential for degradation of misfolded glycoproteins and may function as lectin in ERAD. Mol Cell 19(6):765-75 | |ALG12 |ALG9 |MNL1 |MNS1 |PRC1 |YOS9 | ||||
| Fungal Related Genes/Proteins | Davidson RC, et al. (2004) Functional analysis of the ALG3 gene encoding the Dol-P-Man: Man5GlcNAc2-PP-Dol mannosyltransferase enzyme of P. pastoris. Glycobiology 14(5):399-407 | |OCH1 | ||||
| Genetic Interactions Strains/Constructs | Tong AH, et al. (2004) Global mapping of the yeast genetic interaction network. Science 303(5659):808-13 | |AAD4 |AAH1 |ABF2 |ACE2 |ADH6 |AEP2 |AFG1 |AGP1 |AHC1 |AHC2 |AIM21 |AIM22 |AIM26 |AIM29 |MORE | ||||
| Function/Process Mutants/Phenotypes Strains/Constructs | Deutschbauer AM, et al. (2002) Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 99(24):15530-5 | |ECM18 |EMI5 |IRC19 |MRPS16 |MUM3 |PMA2 |SMA2 |SOP4 |YAP3 |YBL083C |YBR027C |YJR120W | ||||
| Alias Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs | Cipollo JF, et al. (2001) The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum. J Biol Chem 276(24):21828-40 | |ALG11 |ALG2 |OCH1 | ||||
| Alias Function/Process Techniques and Reagents | Kelleher DJ, et al. (2001) Large-scale isolation of dolichol-linked oligosaccharides with homogeneous oligosaccharide structures: determination of steady-state dolichol-linked oligosaccharide compositions. Glycobiology 11(4):321-33 | |||||
| Cellular Location Function/Process Strains/Constructs Substrates/Ligands/Cofactors | Sharma CB, et al. (2001) Biosynthesis of lipid-linked oligosaccharides in yeast: the ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase. Biol Chem 382(2):321-8 | |||||
| Alias Function/Process Mutants/Phenotypes Regulatory Role Strains/Constructs | Cipollo JF and Trimble RB (2000) The accumulation of Man(6)GlcNAc(2)-PP-dolichol in the Saccharomyces cerevisiae Deltaalg9 mutant reveals a regulatory role for the Alg3p alpha1,3-Man middle-arm addition in downstream oligosaccharide-lipid and glycoprotein glycan processing. J Biol Chem 275(6):4267-77 | |ALG6 |ALG8 |ALG9 |CWH41 |DIE2 |OCH1 |ROT2 |SEC18 | ||||
| Mutants/Phenotypes Other Features Strains/Constructs | Shirai T, et al. (2000) The involvement of two specific arginine residues in the action of HM-1 killer toxin was deduced from site-directed mutagenesis. Biol Pharm Bull 23(8):998-1000 | |||||
| Function/Process Fungal Related Genes/Proteins Mutants/Phenotypes Strains/Constructs | Kimura T, et al. (1999) N-glycosylation is involved in the sensitivity of Saccharomyces cerevisiae to HM-1 killer toxin secreted from Hansenula mrakii IFO 0895. Appl Microbiol Biotechnol 51(2):176-84 | |STT3 | ||||
| Disease Gene Related Function/Process Non-Fungal Related Genes/Proteins | Korner C, et al. (1999) Carbohydrate deficient glycoprotein syndrome type IV: deficiency of dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase. EMBO J 18(23):6816-22 | |||||
| Reviews | Kukuruzinska MA and Lennon-Hopkins K (1999) ALG gene expression and cell cycle progression. Biochim Biophys Acta 1426(2):359-72 | |ALG2 |ALG7 | ||||
| DNA/RNA Sequence Features Function/Process Fungal Related Genes/Proteins Mutants/Phenotypes Protein Sequence Features Strains/Constructs | Kimura T, et al. (1997) A novel yeast gene, RHK1, is involved in the synthesis of the cell wall receptor for the HM-1 killer toxin that inhibits beta-1,3-glucan synthesis. Mol Gen Genet 254(2):139-47 | |||||
| Alias DNA/RNA Sequence Features Protein Sequence Features Strains/Constructs | Aebi M, et al. (1996) Cloning and characterization of the ALG3 gene of Saccharomyces cerevisiae. Glycobiology 6(4):439-44 | |STT3 | ||||
| Alias Function/Process Genetic Interactions Mutants/Phenotypes Strains/Constructs | Burda P, et al. (1996) Stepwise assembly of the lipid-linked oligosaccharide in the endoplasmic reticulum of Saccharomyces cerevisiae: identification of the ALG9 gene encoding a putative mannosyl transferase. Proc Natl Acad Sci U S A 93(14):7160-5 | |ALG9 |WBP1 | ||||
| Alias Mutants/Phenotypes | Cueva R, et al. (1996) Preferential transfer to truncated oligosaccharides to the first sequon of yeast exoglucanase in Saccharomyces cerevisiae alg3 cells. Biochim Biophys Acta 1289(3):336-42 | |GLC3 | ||||
| Mutants/Phenotypes | Dean N (1995) Yeast glycosylation mutants are sensitive to aminoglycosides. Proc Natl Acad Sci U S A 92(5):1287-91 | |ALG1 |ALG2 |ALG5 |ANP1 |CWH41 |MNN1 |MNN10 |MNN2 |MNN9 |SEC53 |VRG4 |WBP1 | ||||
| DNA/RNA Sequence Features Mapping | Obermaier B, et al. (1995) Sequence analysis of a 78.6 kb segment of the left end of Saccharomyces cerevisiae chromosome II. Yeast 11(11):1103-12 | |ATP1 |BOI1 |CDC27 |ILS1 |MRP21 |PET112 |PKC1 |ROX3 |RPL23A |RPL32 |SRO77 |TEL1 |YBL081W |YBL086C |MORE | ||||
| Alias Mutants/Phenotypes | Verostek MF and Trimble RB (1995) Mannosyltransferase activities in membranes from various yeast strains. Glycobiology 5(7):671-81 | |KRE2 |MNN1 |OCH1 |PMR1 | ||||
| Genetic Interactions Mutants/Phenotypes Strains/Constructs | Zufferey R, et al. (1995) STT3, a highly conserved protein required for yeast oligosaccharyl transferase activity in vivo. EMBO J 14(20):4949-60 | |ALG5 |ALG6 |ALG8 |ALG9 |DIE2 |STT3 |WBP1 | ||||
| DNA/RNA Sequence Features Mapping | Cusick ME (1994) Sequence of a segment of yeast chromosome II shows two novel genes, one almost entirely hydrophobic and the other extremely asparagine-serine rich. Yeast 10(9):1251-6 | |CDC27 |ILS1 |YBL081W | ||||
| DNA/RNA Sequence Features Mapping | Feldmann H, et al. (1994) Complete DNA sequence of yeast chromosome II. EMBO J 13(24):5795-809 | |AST1 |CDS1 |CHS3 |CMD1 |COQ1 |COR1 |CST26 |CTP1 |DER1 |DUR1,2 |ECM1 |FIG1 |FUI1 |FUR4 |MORE | ||||
| Reviews | Herscovics A and Orlean P (1993) Glycoprotein biosynthesis in yeast. FASEB J 7(6):540-50 | |ALG1 |ALG2 |ALG5 |ALG6 |ALG7 |ALG8 |ANP1 |CWH41 |DPM1 |GDA1 |GFA1 |KRE2 |MNN1 |MNN10 |MORE | ||||
| Alias Genetic Interactions | Nakanishi-Shindo Y, et al. (1993) Structure of the N-linked oligosaccharides that show the complete loss of alpha-1,6-polymannose outer chain from och1, och1 mnn1, and och1 mnn1 alg3 mutants of Saccharomyces cerevisiae. J Biol Chem 268(35):26338-45 | |MNN1 |OCH1 | ||||
| Alias Genetic Interactions Mutants/Phenotypes | Verostek MF, et al. (1993) Glycoprotein biosynthesis in the alg3 Saccharomyces cerevisiae mutant. I. Role of glucose in the initial glycosylation of invertase in the endoplasmic reticulum. J Biol Chem 268(16):12095-103 | |CWH41 |GLC3 |SUC2 | ||||
| Alias Mutants/Phenotypes | Verostek MF, et al. (1993) Glycoprotein biosynthesis in the alg3 Saccharomyces cerevisiae mutant. II. Structure of novel Man6-10GlcNAc2 processing intermediates on secreted invertase. J Biol Chem 268(16):12104-15 | |MNN1 |MNN10 | ||||
| Reviews | Conzelmann A, et al. (1991) Biosynthesis of glycophosphoinositol anchors in Saccharomyces cerevisiae. Cell Biol Int Rep 15(9):863-73 | |ALG2 |DPM1 |GAS1 |KRE1 |MNN9 |SEC53 | ||||
| Alias Mutants/Phenotypes | Verostek MF, et al. (1991) Structure of Saccharomyces cerevisiae alg3, sec18 mutant oligosaccharides. J Biol Chem 266(9):5547-51 | |SEC18 | ||||
| Alias Fungal Related Genes/Proteins Mutants/Phenotypes Strains/Constructs | Huffaker TC and Robbins PW (1983) Yeast mutants deficient in protein glycosylation. Proc Natl Acad Sci U S A 80(24):7466-70 | |ALG1 |ALG2 |ALG5 |ALG6 |SEC53 | ||||
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