Genome-wide Analysis papers 
Click on a topic to see a list of all papers associated with that topic:
| Citation | Topic(s) |
|---|---|
| McBride RC, et al. (2013) Yeast response to LA virus indicates coadapted global gene expression during mycoviral infection. FEMS Yeast Res 13(2):162-79 | Omics |
| McGuffee SR, et al. (2013) Quantitative, genome-wide analysis of eukaryotic replication initiation and termination. Mol Cell 50(1):123-35 | Omics |
| McKinney JS, et al. (2013) A multistep genomic screen identifies new genes required for repair of DNA double-strand breaks in Saccharomyces cerevisiae. BMC Genomics 14(1):251 | Omics |
| Menendez-Benito V, et al. (2013) Spatiotemporal analysis of organelle and macromolecular complex inheritance. Proc Natl Acad Sci U S A 110(1):175-80 | Omics |
| Mirzaei H, et al. (2013) Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins. Proc Natl Acad Sci U S A 110(9):3645-50 | Omics |
| Mitchell L, et al. (2013) mChIP-KAT-MS, a method to map protein interactions and acetylation sites for lysine acetyltransferases. Proc Natl Acad Sci U S A 110(17):E1641-50 | Omics |
| Mitchell SF, et al. (2013) Global analysis of yeast mRNPs. Nat Struct Mol Biol 20(1):127-33 | Omics |
| Mobius W, et al. (2013) Toward a unified physical model of nucleosome patterns flanking transcription start sites. Proc Natl Acad Sci U S A 110(14):5719-24 | Omics |
| Morawiec E, et al. (2013) Maf1, repressor of tRNA transcription, is involved in the control of gluconeogenetic genes in Saccharomyces cerevisiae. Gene () | Omics |
| Nawaz-Ul-Rehman MS, et al. (2013) Yeast screens for host factors in positive-strand RNA virus replication based on a library of temperature-sensitive mutants. Methods 59(2):207-16 | Large-scale phenotype analysis , Omics |
| Olav Hald B, et al. (2013) Programming strategy for efficient modeling of dynamics in a population of heterogeneous cells. Bioinformatics 29(10):1292-8 | Omics |
| Opulente DA, et al. (2013) Coevolution trumps pleiotropy: carbon assimilation traits are independent of metabolic network structure in budding yeast. PLoS One 8(1):e54403 | Omics |
| Osterlund T, et al. (2013) Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling. BMC Syst Biol 7(1):36 | Omics |
| Ozaydin B, et al. (2013) Carotenoid-based phenotypic screen of the yeast deletion collection reveals new genes with roles in isoprenoid production. Metab Eng 15():174-83 | Large-scale phenotype analysis , Omics |
| Park J, et al. (2013) Insights into the iron-ome and manganese-ome of Deltamtm1 Saccharomyces cerevisiae mitochondria. Metallomics () | Omics |
| Patil VA, et al. (2013) Loss of cardiolipin leads to perturbation of mitochondrial and cellular iron homeostasis. J Biol Chem 288(3):1696-705 | Omics |
| Pelechano V, et al. (2013) Extensive transcriptional heterogeneity revealed by isoform profiling. Nature 497(7447):127-31 | Omics |
| Pena PV, et al. (2013) Genome-wide overexpression screen for sodium acetate resistance in Saccharomyces cerevisiae. J Biotechnol 164(1):26-33 | Omics |
| Picotti P, et al. (2013) A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis. Nature 494(7436):266-70 | Omics |
| Rachfall N, et al. (2013) RACK1/Asc1p, a ribosomal node in cellular signaling. Mol Cell Proteomics 12(1):87-105 | Genomic expression study , Large-scale protein detection , Omics |
| Reiter W, et al. (2013) Yeast Protein Phosphatase 2A-Cdc55 Regulates the Transcriptional Response to Hyperosmolarity Stress by Regulating Msn2 and Msn4 Chromatin Recruitment. Mol Cell Biol 33(5):1057-72 | Omics |
| Richie DL, et al. (2013) Identification and evaluation of novel acetolactate synthase inhibitors as antifungal agents. Antimicrob Agents Chemother 57(5):2272-80 | Omics |
| Rios G, et al. (2013) Role of the yeast multidrug transporter Qdr2 in cation homeostasis and the oxidative stress response. FEMS Yeast Res 13(1):97-106 | Large-scale phenotype analysis , Omics |
| Rodriguez J and Tsukiyama T (2013) ATR-like kinase Mec1 facilitates both chromatin accessibility at DNA replication forks and replication fork progression during replication stress. Genes Dev 27(1):74-86 | Omics |
| Samanfar B, et al. (2013) Large-scale investigation of oxygen response mutants in Saccharomyces cerevisiae. Mol Biosyst 9(6):1351-9 | Omics |
| Santoni D, et al. (2013) Identifying Correlations between Chromosomal Proximity of Genes and Distance of Their Products in Protein-Protein Interaction Networks of Yeast. PLoS One 8(3):e57707 | Omics |
| Schuller A, et al. (2013) Overexpression of ctr1?300, a high-affinity copper transporter with deletion of the cytosolic C-terminus in Saccharomyces cerevisiae under excess copper, leads to disruption of transition metal homeostasis and transcriptional remodelling of cellular processes. Yeast 30(5):201-18 | Omics |
| Seresht AK, et al. (2013) Long-term adaptation of Saccharomyces cerevisiae to the burden of recombinant insulin production. Biotechnol Bioeng () | Omics |
| Serrentino ME, et al. (2013) Differential Association of the Conserved SUMO Ligase Zip3 with Meiotic Double-Strand Break Sites Reveals Regional Variations in the Outcome of Meiotic Recombination. PLoS Genet 9(4):e1003416 | Omics |
| Shalem O, et al. (2013) Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects. PLoS Comput Biol 9(3):e1002934 | Omics |
