Genome-wide Analysis papers 
Click on a topic to see a list of all papers associated with that topic:
| Citation | Topic(s) |
|---|---|
| Homouz D and Kudlicki AS (2013) The 3D Organization of the Yeast Genome Correlates with Co-Expression and Reflects Functional Relations between Genes. PLoS One 8(1):e54699 | Omics |
| Hong KK and Nielsen J (2013) Adaptively evolved yeast mutants on galactose show trade-offs in carbon utilization on glucose. Metab Eng 16():78-86 | Omics |
| Hoshida H, et al. (2013) N-glycosylation deficiency enhanced heterologous production of a Bacillus licheniformis thermostable alpha-amylase in Saccharomyces cerevisiae. Appl Microbiol Biotechnol () | Omics |
| Hu J, et al. (2013) Global analysis of phosphorylation networks in humans. Biochim Biophys Acta () | Omics |
| Hu Y, et al. (2013) Telomerase-null survivor screening identifies novel telomere recombination regulators. PLoS Genet 9(1):e1003208 | Omics |
| Huang Z, et al. (2013) A functional variomics tool for discovering drug-resistance genes and drug targets. Cell Rep 3(2):577-85 | Omics |
| Hubmann G, et al. (2013) Quantitative trait analysis of yeast biodiversity yields novel gene tools for metabolic engineering. Metab Eng 17():68-81 | Omics |
| Ide S, et al. (2013) Rtt109 Prevents Hyper-Amplification of Ribosomal RNA Genes through Histone Modification in Budding Yeast. PLoS Genet 9(4):e1003410 | Omics |
| Ismail KS, et al. (2013) Gene expression cross-profiling in genetically modified industrial Saccharomyces cerevisiae strains during high-temperature ethanol production from xylose. J Biotechnol 163(1):50-60 | Omics |
| Judeh T, et al. (2013) TEAK: Topology Enrichment Analysis frameworK for detecting activated biological subpathways. Nucleic Acids Res 41(3):1425-37 | Omics |
| Jung S, et al. (2013) Global Analysis of Condition-specific Subcellular Protein Distribution and Abundance. Mol Cell Proteomics 12(5):1421-35 | Omics |
| Kaiser CJ, et al. (2013) A network of genes connects polyglutamine toxicity to ploidy control in yeast. Nat Commun 4():1571 | Omics |
| Kanshin E, et al. (2013) Displacement of N/Q-rich peptides on TiO2 beads enhances the depth and coverage of yeast phosphoproteome analyses. J Proteome Res () | Omics |
| Karagoz K and Arga KY (2013) Assessment of high-confidence protein-protein interactome in yeast. Comput Biol Chem 45C():1-8 | Omics |
| Kochetov AV, et al. (2013) Hidden coding potential of eukaryotic genomes: nonAUG started ORFs. J Biomol Struct Dyn 31(1):103-14 | Computational analysis , Omics |
| Koschwanez JH, et al. (2013) Improved use of a public good selects for the evolution of undifferentiated multicellularity. Elife 2():e00367 | Omics |
| Lee K, et al. (2013) Genetic landscape of open chromatin in yeast. PLoS Genet 9(2):e1003229 | Omics |
| Lefrancois P, et al. (2013) Centromere-like regions in the budding yeast genome. PLoS Genet 9(1):e1003209 | Omics |
| Lesecque Y, et al. (2013) GC-Biased Gene Conversion in Yeast Is Specifically Associated with Crossovers: Molecular Mechanisms and Evolutionary Significance. Mol Biol Evol 30(6):1409-19 | Omics |
| Li X, et al. (2013) Comprehensive in vivo RNA-binding site analyses reveal a role of Prp8 in spliceosomal assembly. Nucleic Acids Res 41(6):3805-18 | Omics |
| Lis M, et al. (2013) Chemical Genomic Screening of a Saccharomyces cerevisiae Genomewide Mutant Collection Reveals Genes Required for Defense against Four Antimicrobial Peptides Derived from Proteins Found in Human Saliva. Antimicrob Agents Chemother 57(2):840-7 | Omics |
| Liu CG, et al. (2013) Global gene expression analysis of Saccharomyces cerevisiae grown under redox potential-controlled very-high-gravity conditions. Biotechnol J () | Omics |
| Liu Z, et al. (2013) Anaerobic a-Amylase Production and Secretion with Fumarate as the Final Electron Acceptor in Saccharomyces cerevisiae. Appl Environ Microbiol 79(9):2962-7 | Omics |
| Liu Z, et al. (2013) Correlation of cell growth and heterologous protein production by Saccharomyces cerevisiae. Appl Microbiol Biotechnol () | Omics |
| Lopez-Malo M, et al. (2013) Phenotypic analysis of mutant and overexpressing strains of lipid metabolism genes in Saccharomyces cerevisiae: Implication in growth at low temperatures. Int J Food Microbiol 162(1):26-36 | Omics |
| Lourenco AB, et al. (2013) Quantitative (1)H-NMR-Metabolomics Reveals Extensive Metabolic Reprogramming and the Effect of the Aquaglyceroporin FPS1 in Ethanol-Stressed Yeast Cells. PLoS One 8(2):e55439 | Omics |
| Lu JY, et al. (2013) Using functional proteome microarrays to study protein lysine acetylation. Methods Mol Biol 981():151-65 | Omics |
| Lubliner S, et al. (2013) Sequence features of yeast and human core promoters that are predictive of maximal promoter activity. Nucleic Acids Res () | Omics |
| Mascaraque V, et al. (2013) Phosphoproteomic Analysis of Protein Kinase C Signaling in Saccharomyces cerevisiae Reveals Slt2 Mitogen-activated Protein Kinase (MAPK)-dependent Phosphorylation of Eisosome Core Components. Mol Cell Proteomics 12(3):557-74 | Omics |
| Matushkin YG, et al. (2013) Translation efficiency in yeasts correlates with nucleosome formation in promoters. J Biomol Struct Dyn 31(1):96-102 | Computational analysis , Omics |
