Genome-wide Analysis papers 
Click on a topic to see a list of all papers associated with that topic:
| Citation | Topic(s) |
|---|---|
| McLellan CA, et al. (2012) Inhibiting GPI anchor biosynthesis in fungi stresses the endoplasmic reticulum and enhances immunogenicity. ACS Chem Biol 7(9):1520-8 | Large-scale phenotype analysis , Omics , Other large-scale proteomic analysis |
| McLellan JL, et al. (2012) Synthetic Lethality of Cohesins with PARPs and Replication Fork Mediators. PLoS Genet 8(3):e1002574 | Large-scale genetic interaction , Omics |
| McQueen J, et al. (2012) The Mck1 GSK-3 kinase inhibits the activity of Clb2-Cdk1 post-nuclear division. Cell Cycle 11(18):3421-32 | Large-scale genetic interaction , Omics |
| Mendes Pinto I, et al. (2012) Actin Depolymerization Drives Actomyosin Ring Contraction during Budding Yeast Cytokinesis. Dev Cell 22(6):1247-60 | Large-scale protein localization , Omics |
| Michaut M and Bader GD (2012) Multiple genetic interaction experiments provide complementary information useful for gene function prediction. PLoS Comput Biol 8(6):e1002559 | Computational analysis , Omics |
| Miller C, et al. (2012) Mediator phosphorylation prevents stress response transcription during non-stress conditions. J Biol Chem 287(53):44017-26 | Genomic expression study , Omics |
| Milliman EJ, et al. (2012) Genomic insights of protein arginine methyltransferase Hmt1 binding reveals novel regulatory functions. BMC Genomics 13(1):728 | Omics |
| Mine-Hattab J and Rothstein R (2012) Increased chromosome mobility facilitates homology search during recombination.LID - 10.1038/ncb2472 [doi] Nat Cell Biol () | Computational analysis , Omics |
| Mira NP, et al. (2012) Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast: "in silico" and "wet-lab" approaches. Methods Mol Biol 809():27-48 | Computational analysis , Omics |
| Mishima H, et al. (2012) The Ruby UCSC API: accessing the UCSC genome database using Ruby. BMC Bioinformatics 13(1):240 | Computational analysis , Omics |
| Mizuta M, et al. (2012) Screening for yeast mutants defective in recipient ability for transkingdom conjugation with Escherichia coli revealed importance of vacuolar ATPase activity in the horizontal DNA transfer phenomenon. Microbiol Res 167(5):311-6 | Large-scale phenotype analysis , Omics |
| Moehle EA, et al. (2012) The Yeast SR-Like Protein Npl3 Links Chromatin Modification to mRNA Processing. PLoS Genet 8(11):e1003101 | Omics |
| Moir RD, et al. (2012) SCS3 and YFT2 Link Transcription of Phospholipid Biosynthetic Genes to ER Stress and the UPR. PLoS Genet 8(8):e1002890 | Large-scale genetic interaction , Omics |
| Moisset P, et al. (2012) Continuous modeling of metabolic networks with gene regulation in yeast and in vivo determination of rate parameters. Biotechnol Bioeng 109(9):2325-39 | Computational analysis , Omics |
| Mommen GP, et al. (2012) Unbiased selective isolation of protein N-terminal peptides from complex proteome samples using phospho tagging (PTAG) and TiO(2)-based depletion. Mol Cell Proteomics 11(9):832-42 | Large-scale protein modification , Omics |
| Money D and Whelan S (2012) Characterizing the phylogenetic tree-search problem. Syst Biol 61(2):228-39 | Computational analysis , Omics |
| Morisaka H, et al. (2012) Two-dimensional protein separation by the HPLC system with a monolithic column. Biosci Biotechnol Biochem 76(3):585-8 | Large-scale protein detection , Omics |
| Moriya H, et al. (2012) Robustness analysis of cellular systems using the genetic tug-of-war method. Mol Biosyst 8(10):2513-22 | Computational analysis , Omics |
| Morra G, et al. (2012) Corresponding Functional Dynamics across the Hsp90 Chaperone Family: Insights from a Multiscale Analysis of MD Simulations. PLoS Comput Biol 8(3):e1002433 | Computational analysis , Omics |
| Morshed N, et al. (2012) Simultaneous learning of instantaneous and time-delayed genetic interactions using novel information theoretic scoring technique. BMC Syst Biol 6(1):62 | Computational analysis , Omics |
| Mosca R, et al. (2012) The role of structural disorder in the rewiring of protein interactions through evolution. Mol Cell Proteomics 11(7):M111.014969 | Computational analysis , Omics |
| Moser C and Gupta M (2012) A Generalized Hidden Markov Model for Determining Sequence-based Predictors of Nucleosome Positioning.LID - 10.2202/1544-6115.1707 [doi]LID - /j/sagmb.2012.11.issue-2/1544-6115.1707/1544-6115.1707.xml [pii] Stat Appl Genet Mol Biol 11(2) | Computational analysis , Omics |
| Mukhopadhyay A, et al. (2012) Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach. Mol Biosyst 8(11):3036-48 | Computational analysis , Omics |
| Muller CA and Nieduszynski CA (2012) Conservation of replication timing reveals global and local regulation of replication origin activity. Genome Res 22(10):1953-62 | Omics , Other genomic analysis |
| Muller S, et al. (2012) A new dynamic model for highly efficient mass transfer in aerated bioreactors and consequences for kL a identification. Biotechnol Bioeng 109(12):2997-3006 | Computational analysis , Omics |
| Murray SC, et al. (2012) A pre-initiation complex at the 3'-end of genes drives antisense transcription independent of divergent sense transcription. Nucleic Acids Res 40(6):2432-44 | Computational analysis , Omics |
| Murthy GS, et al. (2012) A simultaneous saccharification and fermentation model for dynamic growth environments. Bioprocess Biosyst Eng 35(4):519-34 | Computational analysis , Omics |
| Musso G, et al. (2012) Characterization and evolutionary analysis of protein-protein interaction networks. Methods Mol Biol 856():363-80 | Large-scale protein interaction , Omics |
| Nadal-Ribelles M, et al. (2012) Hog1 bypasses stress-mediated down-regulation of transcription by RNA polymerase II redistribution and chromatin remodeling. Genome Biol 13(11):R106 | Omics |
| Nadler-Holly M, et al. (2012) Interactions of subunit CCT3 in the yeast chaperonin CCT/TRiC with Q/N-rich proteins revealed by high-throughput microscopy analysis. Proc Natl Acad Sci U S A 109(46):18833-8 | Omics |
