References Associated with Literature Topic: Omics Help


Citation
Brown JC and Madhani HD  (2012) Approaching the functional annotation of fungal virulence factors using cross-species genetic interaction profiling. PLoS Genet 8(12):e1003168
Brush GS, et al.  (2012) Yeast IME2 Functions Early in Meiosis Upstream of Cell Cycle-Regulated SBF and MBF Targets. PLoS One 7(2):e31575
Bryant JM, et al.  (2012) The linker histone plays a dual role during gametogenesis in Saccharomyces cerevisiae. Mol Cell Biol 32(14):2771-83
Bustard DE, et al.  (2012) During replication stress, non-SMC element 5 (NSE5) is required for Smc5/6 protein complex functionality at stalled forks. J Biol Chem 287(14):11374-83
Busti S, et al.  (2012) Overexpression of Far1, a cyclin-dependent kinase inhibitor, induces a large transcriptional reprogramming in which RNA synthesis senses Far1 in a Sfp1-mediated way. Biotechnol Adv 30(1):185-201
Cacace F, et al.  (2012) Stochastic Modeling of Expression Kinetics Identifies Messenger Half-Lives and Reveals Sequential Waves of Co-ordinated Transcription and Decay. PLoS Comput Biol 8(11):e1002772
Cao J, et al.  (2012) Modeling gene regulation networks using ordinary differential equations. Methods Mol Biol 802():185-97
Cao K, et al.  (2012) Computational detection and analysis of sequences with duplex-derived interstrand G-quadruplex forming potential. Methods 57(1):3-10
Carrillo E, et al.  (2012) Characterizing the roles of Met31 and Met32 in coordinating Met4-activated transcription in the absence of Met30. Mol Biol Cell 23(10):1928-42
Carter GW, et al.  (2012) Use of pleiotropy to model genetic interactions in a population. PLoS Genet 8(10):e1003010
Casamayor A, et al.  (2012) The role of the Snf1 kinase in the adaptive response of Saccharomyces cerevisiae to alkaline pH stress. Biochem J 444(1):39-49
Casola C, et al.  (2012) Very low rate of gene conversion in the yeast genome. Mol Biol Evol 29(12):3817-26
Caydasi AK, et al.  (2012) A dynamical model of the spindle position checkpoint. Mol Syst Biol 8():582
Celton M, et al.  (2012) A comparative transcriptomic, fluxomic and metabolomic analysis of the response of Saccharomyces cerevisiae to increases in NADPH oxidation. BMC Genomics 13(1):317
Celton M, et al.  (2012) A constraint-based model analysis of the metabolic consequences of increased NADPH oxidation in Saccharomyces cerevisiae. Metab Eng 14(4):366-79
Cesarini E, et al.  (2012) H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae. Mol Biol Cell 23(14):2770-81
Chan CT, et al.  (2012) Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins. Nat Commun 3():937
Chang DT, et al.  (2012) A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae. BMC Genomics 13 Suppl 1():S11
Chang YW, et al.  (2012) Interaction surface and topology of Get3-Get4-Get5 protein complex, involved in targeting tail-anchored proteins to endoplasmic reticulum. J Biol Chem 287(7):4783-9
Charoensawan V, et al.  (2012) DNA sequence preferences of transcriptional activators correlate more strongly than repressors with nucleosomes. Mol Cell 47(2):183-92
Chatsurachai S, et al.  (2012) An in silico platform for the design of heterologous pathways in nonnative metabolite production. BMC Bioinformatics 13(1):93
Chau AH, et al.  (2012) Designing synthetic regulatory networks capable of self-organizing cell polarization. Cell 151(2):320-32
Chavez MS, et al.  (2012) The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability. Epigenetics Chromatin 5(1):5
Chen G, et al.  (2012) Using model organism Saccharomyces cerevisiae to evaluate the effects of ELF-MF and RF-EMF exposure on global gene expression. Bioelectromagnetics 33(7):550-60
Chen J, et al.  (2012) Identification of a small molecule yeast TORC1 inhibitor with a multiplex screen based on flow cytometry. ACS Chem Biol 7(4):715-22
Chen L, et al.  (2012) Analysis of metabolic pathway using hybrid properties. Protein Pept Lett 19(1):99-107
Chen MJ, et al.  (2012) De novo motif discovery facilitates identification of interactions between transcription factors in Saccharomyces cerevisiae. Bioinformatics 28(5):701-8
Chen N, et al.  (2012) Genome-based kinetic modeling of cytosolic glucose metabolism in industrially relevant cell lines: Saccharomyces cerevisiae and Chinese hamster ovary cells. Bioprocess Biosyst Eng 35(6):1023-33
Chen N, et al.  (2012) Metabolic network reconstruction: advances in in silico interpretation of analytical information. Curr Opin Biotechnol 23(1):77-82
Chen W, et al.  (2012) Prediction of replication origins by calculating DNA structural properties. FEBS Lett 586(6):934-8