References Associated with Literature Topic: Genomic co-immunoprecipitation study Help


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Schafer G, et al.  (2008) The Saccharomyces cerevisiae linker histone Hho1p is essential for chromatin compaction in stationary phase and is displaced by transcription. Proc Natl Acad Sci U S A 105(39):14838-43
Shimada K, et al.  (2008) Ino80 chromatin remodeling complex promotes recovery of stalled replication forks. Curr Biol 18(8):566-75
Shivaswamy S and Iyer VR  (2008) Stress-dependent dynamics of global chromatin remodeling in yeast: dual role for SWI/SNF in the heat shock stress response. Mol Cell Biol 28(7):2221-34
Shivaswamy S, et al.  (2008) Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation. PLoS Biol 6(3):e65
Soragni E and Kassavetis GA  (2008) Absolute Gene Occupancies by RNA Polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae. J Biol Chem 283(39):26568-76
Tan K, et al.  (2008) A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response. Proc Natl Acad Sci U S A 105(8):2934-9
Tuch BB, et al.  (2008) The evolution of combinatorial gene regulation in fungi. PLoS Biol 6(2):e38
Verma-Gaur J, et al.  (2008) Genomewide recruitment analysis of Rpb4, a subunit of polymerase II in Saccharomyces cerevisiae, reveals its involvement in transcription elongation. Eukaryot Cell 7(6):1009-18
Wang BD and Strunnikov A  (2008) Transcriptional homogenization of rDNA repeats in the episome-based nucleolus induces genome-wide changes in the chromosomal distribution of condensin. Plasmid 59(1):45-53
Wu D, et al.  (2008) Recruitment and dissociation of nonhomologous end joining proteins at a DNA double-strand break in Saccharomyces cerevisiae. Genetics 178(3):1237-49
[No authors listed]  (2008) [Functional characteristics of the individual genomic condensin binding sites of Saccharomyces cerevisiae using minichromosome mitotic segregation stability model] Tsitologiia 50(9):788-93
Albert I, et al.  (2007) Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome. Nature 446(7135):572-6
Bausch C, et al.  (2007) Transcription alters chromosomal locations of cohesin in Saccharomyces cerevisiae. Mol Cell Biol 27(24):8522-32
Bermejo R, et al.  (2007) Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation. Genes Dev 21(15):1921-36
Bianchi A and Shore D  (2007) Increased association of telomerase with short telomeres in yeast. Genes Dev 21(14):1726-30
Borneman AR, et al.  (2007) Divergence of transcription factor binding sites across related yeast species. Science 317(5839):815-9
Borneman AR, et al.  (2007) Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms. Funct Integr Genomics 7(4):335-45
Chen S, et al.  (2007) Orc6 is required for dynamic recruitment of Cdt1 during repeated Mcm2 7 loading. Genes Dev 21(22):2897-2907
Cheng C, et al.  (2007) Inference of transcription modification in long-live yeast strains from their expression profiles. BMC Genomics 8():219
Dion MF, et al.  (2007) Dynamics of replication-independent histone turnover in budding yeast. Science 315(5817):1405-8
Durant M and Pugh BF  (2007) NuA4-directed chromatin transactions throughout the Saccharomyces cerevisiae genome. Mol Cell Biol 27(15):5327-35
Ernst J, et al.  (2007) Reconstructing dynamic regulatory maps. Mol Syst Biol 3():74
Fardeau V, et al.  (2007) The central role of PDR1 in the foundation of yeast drug resistance. J Biol Chem 282(7):5063-74
Furuyama S and Biggins S  (2007) Centromere identity is specified by a single centromeric nucleosome in budding yeast. Proc Natl Acad Sci U S A 104(37):14706-11
Huisinga KL and Pugh BF  (2007) A TATA binding protein regulatory network that governs transcription complex assembly. Genome Biol 8(4):R46
Kasahara K, et al.  (2007) Assembly of Regulatory Factors on rRNA and Ribosomal Protein Genes in Saccharomyces cerevisiae. Mol Cell Biol 27(19):6686-6705
Kirmizis A, et al.  (2007) Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation. Nature 449(7164):928-32
Li B, et al.  (2007) Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription. Genes Dev 21(11):1422-30
Mieczkowski PA, et al.  (2007) Loss of a histone deacetylase dramatically alters the genomic distribution of Spo11p-catalyzed DNA breaks in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 104(10):3955-60
Ogiwara H, et al.  (2007) Actin-related protein Arp4 functions in kinetochore assembly. Nucleic Acids Res 35(9):3109-17