| Naumov GI, et al. (2013) Molecular genetic diversity of the Saccharomyces yeasts in Taiwan: Saccharomyces arboricola, Saccharomyces cerevisiae and Saccharomyces kudriavzevii. Antonie Van Leeuwenhoek 103(1):217-28
|
| Sun X, et al. (2013) An improved implementation of effective number of codons (nc). Mol Biol Evol 30(1):191-6
|
| de Dios CH, et al. (2013) The transmembrane protein Opy2 mediates activation of the Cek1 MAP kinase in Candida albicans. Fungal Genet Biol 50():21-32
|
| Abrie JA, et al. (2012) Functional mapping of the disparate activities of the yeast moonlighting protein Hal3. Biochem J 442(2):357-68
|
| Altenhoff AM, et al. (2012) Resolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogs. PLoS Comput Biol 8(5):e1002514
|
| Atkinson GC, et al. (2012) Evolutionary and genetic analyses of mitochondrial translation initiation factors identify the missing mitochondrial IF3 in S. cerevisiae. Nucleic Acids Res 40(13):6122-34
|
| Aves SJ, et al. (2012) Evolutionary diversification of eukaryotic DNA replication machinery. Subcell Biochem 62():19-35
|
| Baker CR, et al. (2012) Protein modularity, cooperative binding, and hybrid regulatory States underlie transcriptional network diversification. Cell 151(1):80-95
|
| Bateman DA and Wickner RB (2012) [PSI+] Prion transmission barriers protect Saccharomyces cerevisiae from infection: intraspecies 'species barriers'. Genetics 190(2):569-79
|
| Beopoulos A, et al. (2012) Identification and characterization of DGA2, an acyltransferase of the DGAT1 acyl-CoA:diacylglycerol acyltransferase family in the oleaginous yeast Yarrowia lipolytica. New insights into the storage lipid metabolism of oleaginous yeasts. Appl Microbiol Biotechnol 93(4):1523-37
|
| Bernstein DA, et al. (2012) Genes come and go: the evolutionarily plastic path of budding yeast RNase III enzymes. RNA Biol 9(9):1123-8
|
| Borneman AR, et al. (2012) The genome sequence of the wine yeast VIN7 reveals an allotriploid hybrid genome with Saccharomyces cerevisiae and Saccharomyces kudriavzevii origins. FEMS Yeast Res 12(1):88-96
|
| Burke MK (2012) How does adaptation sweep through the genome? Insights from long-term selection experiments. Proc Biol Sci 279(1749):5029-38
|
| Cardona F, et al. (2012) Phylogenetic origin and transcriptional regulation at the post-diauxic phase of SPI1, in Saccharomyces cerevisiae. Cell Mol Biol Lett 17(3):393-407
|
| Carvunis AR, et al. (2012) Proto-genes and de novo gene birth. Nature 487(7407):370-4
|
| Casola C, et al. (2012) Very low rate of gene conversion in the yeast genome. Mol Biol Evol 29(12):3817-26
|
| Chen WH, et al. (2012) Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age. Mol Biol Evol 29(7):1703-6
|
| Christiaens JF, et al. (2012) Functional divergence of gene duplicates through ectopic recombination. EMBO Rep 13(12):1145-51
|
| Clark NL, et al. (2012) Evolutionary rate covariation reveals shared functionality and coexpression of genes. Genome Res 22(4):714-20
|
| Di Rienzi SC, et al. (2012) Maintaining replication origins in the face of genomic change. Genome Res 22(10):1940-52
|
| Dunn B, et al. (2012) Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments. Genome Res 22(5):908-24
|
| Engle EK and Fay JC (2012) Divergence of the Yeast Transcription Factor FZF1 Affects Sulfite Resistance. PLoS Genet 8(6):e1002763
|
| Fazius F, et al. (2012) The fungal a-aminoadipate pathway for lysine biosynthesis requires two enzymes of the aconitase family for the isomerization of homocitrate to homoisocitrate. Mol Microbiol 86(6):1508-30
|
| Fernandez MA, et al. (2012) Identification of a core set of signature cell cycle genes whose relative order of time to peak expression is conserved across species. Nucleic Acids Res 40(7):2823-32
|
| Fernandez-Martinez J, et al. (2012) Structure-function mapping of a heptameric module in the nuclear pore complex. J Cell Biol 196(4):419-34
|
| Finnigan GC, et al. (2012) Evolution of increased complexity in a molecular machine. Nature 481(7381):360-4
|
| Finnigan GC, et al. (2012) Sorting of the yeast vacuolar-type, proton-translocating ATPase enzyme complex (V-ATPase): identification of a necessary and sufficient Golgi/endosomal retention signal in Stv1p. J Biol Chem 287(23):19487-500
|
| Fokkens L, et al. (2012) Gene duplications contribute to the overrepresentation of interactions between proteins of a similar age. BMC Evol Biol 12(1):99
|
| Franzosa EA and Xia Y (2012) Independent effects of protein core size and expression on residue-level structure-evolution relationships. PLoS One 7(10):e46602
|
| Fraser H, et al. (2012) Polygenic cis-regulatory adaptation in the evolution of yeast pathogenicity. Genome Res 22(10):1930-9
|
