References Associated with Literature Topic: DNA/RNA Sequence Features Help


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Mahapatra S, et al.  (2011) Yeast H2A.Z, FACT complex and RSC regulate transcription of tRNA gene through differential dynamics of flanking nucleosomes. Nucleic Acids Res 39(10):4023-34
Mancera E, et al.  (2011) Genome-wide survey of post-meiotic segregation during yeast recombination. Genome Biol 12(4):R36
Marquardt S, et al.  (2011) Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species. Transcription 2(3):145-154
Masumoto H, et al.  (2011) The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccharomyces cerevisiae. PLoS One 6(12):e28980
Meyer M, et al.  (2011) Deciphering 3'ss Selection in the Yeast Genome Reveals an RNA Thermosensor that Mediates Alternative Splicing. Mol Cell 43(6):1033-9
Minca EC and Kowalski D  (2011) Replication fork stalling by bulky DNA damage: localization at active origins and checkpoint modulation. Nucleic Acids Res 39(7):2610-23
Mira NP, et al.  (2011) Identification of a DNA-binding site for the transcription factor Haa1, required for Saccharomyces cerevisiae response to acetic acid stress. Nucleic Acids Res 39(16):6896-907
Miyazaki T and Kobayashi T  (2011) Visualization of the dynamic behavior of ribosomal RNA gene repeats in living yeast cells. Genes Cells 16(5):491-502
Monti P, et al.  (2011) 3-Methyl-3-deazaadenine, a stable isostere of N3-methyl-adenine, is efficiently bypassed by replication in vivo and by transcription in vitro. DNA Repair (Amst) 10(8):861-8
Mori S, et al.  (2011) The intron of tRNA-TrpCCA is dispensable for growth and translation of Saccharomyces cerevisiae. RNA 17(9):1760-9
Muller LA and McCusker JH  (2011) Nature and distribution of large sequence polymorphisms in Saccharomyces cerevisiae. FEMS Yeast Res 11(7):587-94
Muller LA, et al.  (2011) Genome-wide association analysis of clinical vs. nonclinical origin provides insights into Saccharomyces cerevisiae pathogenesis. Mol Ecol 20(19):4085-97
Munzarova V, et al.  (2011) Translation Reinitiation Relies on the Interaction between eIF3a/TIF32 and Progressively Folded cis-Acting mRNA Elements Preceding Short uORFs. PLoS Genet 7(7):e1002137
N'guessan KF, et al.  (2011) Identification of yeasts during alcoholic fermentation of tchapalo, a traditional sorghum beer from Cote d'Ivoire. Antonie Van Leeuwenhoek 99(4):855-64
Naumov GI and Naumova ES  (2011) [Comparative genetics of yeast Saccharomyces cerevisiae: chromosomal translocations carrying the SUC2 marker]. Genetika 47(2):168-73
Nguyen HV, et al.  (2011) Deciphering the Hybridisation History Leading to the Lager Lineage Based on the Mosaic Genomes of Saccharomyces bayanus Strains NBRC1948 and CBS380. PLoS One 6(10):e25821
Nilsson J, et al.  (2011) Proteome-wide evidence for enhanced positive Darwinian selection within intrinsically disordered regions in proteins. Genome Biol 12(7):R65
Nisamedtinov I, et al.  (2011) Metabolic changes underlying the higher accumulation of glutathione in Saccharomyces cerevisiae mutants. Appl Microbiol Biotechnol 89(4):1029-37
Oheigeartaigh SS, et al.  (2011) Systematic discovery of unannotated genes in 11 yeast species using a database of orthologous genomic segments. BMC Genomics 12(1):377
Padinhateeri R and Marko JF  (2011) Nucleosome positioning in a model of active chromatin remodeling enzymes. Proc Natl Acad Sci U S A 108(19):7799-803
Pardo CE, et al.  (2011) MethylViewer: computational analysis and editing for bisulfite sequencing and methyltransferase accessibility protocol for individual templates (MAPit) projects. Nucleic Acids Res 39(1):e5
Park EH, et al.  (2011) Role of Osmotic and Salt Stress in the Expression of Erythrose Reductase in Candida magnoliae. J Microbiol Biotechnol 21(10):1064-8
Parreiras LS, et al.  (2011) Cellular effects and epistasis among three determinants of adaptation in experimental populations of Saccharomyces cerevisiae. Eukaryot Cell 10(10):1348-56
Parts L, et al.  (2011) Revealing the genetic structure of a trait by sequencing a population under selection. Genome Res 21(7):1131-8
Perederina A, et al.  (2011) Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP. RNA 17(10):1922-31
Qiu ZR, et al.  (2011) An essential role for trimethylguanosine RNA caps in Saccharomyces cerevisiae meiosis and their requirement for splicing of SAE3 and PCH2 meiotic pre-mRNAs. Nucleic Acids Res 39(13):5633-46
Qiu ZR, et al.  (2011) Defining the Mer1 and Nam8 meiotic splicing regulons by cDNA rescue. RNA 17(9):1648-54
Qiu ZR, et al.  (2011) Determinants of Nam8-dependent splicing of meiotic pre-mRNAs. Nucleic Acids Res 39(8):3427-45
Rachfall N, et al.  (2011) 5'TRU: identification and analysis of translationally regulative 5'untranslated regions in amino acid starved yeast cells. Mol Cell Proteomics 10(6):M110.003350
Radman-Livaja M, et al.  (2011) Dynamics of Sir3 spreading in budding yeast: secondary recruitment sites and euchromatic localization. EMBO J 30(6):1012-26