References Associated with Literature Topic: DNA/RNA Sequence Features Help


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Chang CP, et al.  (2010) A single sequence context cannot satisfy all non-AUG initiator codons in yeastdagger. BMC Microbiol 10():188
Chen L and Lopes JM  (2010) Multiple bHLH proteins regulate CIT2 expression in Saccharomyces cerevisiae. Yeast 27(6):345-59
Chen X, et al.  (2010) A dynamic Bayesian network for identifying protein-binding footprints from single molecule-based sequencing data. Bioinformatics 26(12):i334-42
Chevtzoff C, et al.  (2010) Reactive oxygen species-mediated regulation of mitochondrial biogenesis in the yeast Saccharomyces cerevisiae. J Biol Chem 285(3):1733-42
Chou JY, et al.  (2010) Multiple Molecular Mechanisms Cause Reproductive Isolation between Three Yeast Species. PLoS Biol 8(7):e1000432
Chritton JJ and Wickens M  (2010) Translational repression by PUF proteins in vitro. RNA 16(6):1217-25
Chung S and Takizawa PA  (2010) Multiple Myo4 motors enhance ASH1 mRNA transport in Saccharomyces cerevisiae. J Cell Biol 189(4):755-67
Cormier L, et al.  (2010) Transcriptional plasticity through differential assembly of a multiprotein activation complex. Nucleic Acids Res 38(15):4998-5014
Crabbe L, et al.  (2010) Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response. Nat Struct Mol Biol 17(11):1391-1397
Csoma H, et al.  (2010) Biological diversity of Saccharomyces yeasts of spontaneously fermenting wines in four wine regions: comparative genotypic and phenotypic analysis. Int J Food Microbiol 140(2-3):239-48
Cuchalova L, et al.  (2010) The RNA Recognition Motif of Eukaryotic Translation Initiation Factor 3g (eIF3g) Is Required for Resumption of Scanning of Posttermination Ribosomes for Reinitiation on GCN4 and Together with eIF3i Stimulates Linear Scanning. Mol Cell Biol 30(19):4671-86
Darieva Z, et al.  (2010) A competitive transcription factor binding mechanism determines the timing of late cell cycle-dependent gene expression. Mol Cell 38(1):29-40
Davey RP, et al.  (2010) TURNIP: tracking unresolved nucleotide polymorphisms in large hard-to-assemble regions of repetitive DNA sequence. Bioinformatics 26(22):2908-9
Dietvorst J, et al.  (2010) Comparison of the MTT1- and MAL31-like maltose transporter genes in lager yeast strains. FEMS Microbiol Lett 310(2):152-7
Domitrovic T, et al.  (2010) Structural and functional study of YER067W, a new protein involved in yeast metabolism control and drug resistance. PLoS One 5(6):e11163
Dong S, et al.  (2010) Degradation of YRA1 Pre-mRNA in the cytoplasm requires translational repression, multiple modular intronic elements, Edc3p, and Mex67p. PLoS Biol 8(4):e1000360
Edwards SR and Wandless TJ  (2010) Dicistronic regulation of fluorescent proteins in the budding yeast Saccharomyces cerevisiae. Yeast 27(4):229-36
Ehrenreich IM, et al.  (2010) Dissection of genetically complex traits with extremely large pools of yeast segregants. Nature 464(7291):1039-42
Erat MC, et al.  (2010) Metal ion-N7 coordination in a ribozyme branch domain by NMR. J Inorg Biochem 104(5):611-3
Ertel F, et al.  (2010) In Vitro Reconstitution of PHO5 Promoter Chromatin Remodeling Points to a Role for Activator-Nucleosome Competition In Vivo. Mol Cell Biol 30(16):4060-76
Esposito M, et al.  (2010) Gene-wide histone acetylation at the yeast INO1 requires the transcriptional activator Ino2p. Biochem Biophys Res Commun 391(2):1285-90
Fan X, et al.  (2010) Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation. Proc Natl Acad Sci U S A 107(42):17945-50
Fritsch O, et al.  (2010) DNA ligase 4 stabilizes the ribosomal DNA array upon fork collapse at the replication fork barrier. DNA Repair (Amst) 9(8):879-888
Fujii M, et al.  (2010) Identification of genes that affect sensitivity to 5-bromodeoxyuridine in the yeast Saccharomyces cerevisiae. Mol Genet Genomics 283(5):461-8
Gangadharan S, et al.  (2010) Inaugural Article: DNA transposon Hermes inserts into DNA in nucleosome-free regions in vivo. Proc Natl Acad Sci U S A 107(51):21966-72
Garcia M, et al.  (2010) Mitochondrial presequence and open reading frame mediate asymmetric localization of messenger RNA. EMBO Rep 11(4):285-91
Gerber S, et al.  (2010) Graphical analysis and experimental evaluation of Saccharomyces cerevisiae p(trk(1|2)) and p(bmh(1|2)) promoter region. Genome Inform 22(1):11-20
Gerke J, et al.  (2010) Gene-environment interactions at nucleotide resolution.LID - e1001144 [pii] PLoS Genet 6(9)
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Govender P, et al.  (2010) FLO gene-dependent phenotypes in industrial wine yeast strains. Appl Microbiol Biotechnol 86(3):931-45